Small Estuary Research Articles

Unique ‘spring-loaded’ gnathopod in the recently re-discovered and highly range-restricted estuarine amphipod Quadrivisio aviceps

The amphipod Quadrivisio aviceps (KH Barnard 1940), previously known from just three records collected at two small estuaries in the Western Cape, South Africa, was re-discovered at one of the original collection sites (the Palmiet River lagoon). The population at the second site (the Klein River estuary) appears to have died out, and surveys of other nearby estuaries failed to detect any additional populations. The species thus now appears to be restricted to a few hundred metres within a single small estuary, making it perhaps South Africa's most range-restricted marine crustacean. The gnathopod 2 of males has an extremely unusual shortened and elbowed dactyl, as well as a newly discovered and unique horseshoe-shaped ‘spring’ of elastic resilin tissue inserted within the muscles of the propodus. The function of the structure could not be confirmed, but it is thought to be a previously unknown vibration or sound-generating mechanism.

Catchment land use predicts benthic vegetation in small estuaries.

Many estuaries are becoming increasingly eutrophic from human activities within their catchments. Nutrient loads often are used to assess risk of eutrophication to estuaries, but such data are expensive and time consuming to obtain. We compared the percent of fertilized land within a catchment, dissolved inorganic nitrogen loads, catchment to estuary area ratio and flushing time as predictors of the proportion of macroalgae to total vegetation within 14 estuaries in south-eastern Australia. The percent of fertilized land within the catchment was the best predictor of the proportion of macroalgae within the estuaries studied. There was a transition to a dominance of macroalgae once the proportion of fertilized land in the catchment exceeded 24%, highlighting the sensitivity of estuaries to catchment land use.

An analysis on half century morphological changes in the Changjiang Estuary: Spatial variability under natural processes and human intervention

Abstract Examination of large scale, alluvial estuarine morphology and associated time evolution is of particular importance regarding management of channel navigability, ecosystem, etc. In this work, we analyze morphological evolution and changes of the channel-shoal system in the Changjiang Estuary, a river- and tide-controlled coastal plain estuary, based on bathymetric data between 1958 and 2016. We see that its channel-shoal pattern is featured by meandering and bifurcated channels persisting over decades. In the vertical direction, hypsometry curves show that the sand bars and shoals are continuously accreted while the deep channels are eroded, leading to narrower and deeper estuarine channels. Intensive human activities in terms of reclamation, embankment, and dredging play a profound role in controlling the decadal morphological evolution by stabilizing coastlines and narrowing channels. Even though, the present Changjiang Estuary is still a pretty wide and shallow system with channel width-to-depth ratios >1000, much larger than usual fluvial rivers and small estuaries. In-depth analysis suggests that the Changjiang Estuary as a whole exhibited an overall deposition trend over 59 years, i.e., a net deposition volume of 8.3 × 108 m3. Spatially, the pan-South Branch was net eroded by 9.7 × 108 m3 whereas the mouth bar zone was net deposited by 18 × 108 m3, suggesting that the mouth bar zone is a major sediment sink. Over time there is no directional deposition or erosion trend in the interval though riverine sediment supply has decreased by 2/3 since the mid-1980s. We infer that the pan-South Branch is more fluvial-controlled therefore its morphology responds to riverine sediment load reduction fast while the mouth bar zone is more controlled by both river and tides that its morphological response lags to riverine sediment supply changes at a time scale >10 years, which is an issue largely ignored in previous studies. We argue that the time lag effect needs particular consideration in projecting future estuarine morphological changes under a low sediment supply regime and sea-level rise. Overall, the findings in this work can have implications on management of estuarine ecosystem, navigation channel and coastal flooding in general.

Non-native species colonization of highly diverse, wave swept outer coast habitats in Central California

More non-native species (NNS) are reported from harbors, estuaries and protected embayments than in wave-exposed, open-coast habitats. In California (USA), hundreds of NNS have become established in international ports, and dozens are known from smaller estuaries. In contrast, only 22 NNS are reported from the state’s 1350 km of open coast. As a result, the perception that open-coast habitats are not vulnerable to invasions has persisted. Management and monitoring focuses on ports and estuaries; the last major monitoring effort on the open coast occurred in 2004. Much of the species-rich Central California coast is now part of a network of marine protected areas (MPAs). We surveyed 12 wave-swept rocky intertidal and eight subtidal sites (from 37°53′40N 122°42′30W to 36°31′16N 121°56′22W) for NNS. At least one NNS was detected at half of the sites surveyed, but most were not widespread or abundant. One exception, a bryozoan in the Watersipora spp. complex, known primarily from ports and estuaries, was found at multiple sites, and was abundant at some. Another non-native, the alga Caulacanthus ustulatus, was abundant at a single site. MPAs were just as likely as sites outside of MPAs to have NNS. For subtidal sites, proximity to a harbor was correlated with the abundance of non-natives. Our findings suggest that our study area is still relatively uninvaded, but the success of Watersipora within some of these highly diverse rocky shore sites underscores the potential vulnerability of high-value open-coast systems to invasions.

Interannual water quality changes at the head of a tropical estuary.

Waters entering the small estuaries of the Brazilian north-east originate from drainage basins that cross semi-arid and tropical rainforest areas at various levels of use and conservation. Such rivers are often under heavy demand for water supply and other services, such as effluent dilution. The present study examines four consecutive years (2006-2009) of water quality-monitoring data divided by season (rainy and dry) just before the Goiana River enters its estuary. The environmental variables are largely controlled by rainfall patterns. The water temperatures are consistently above 25°C, which impairs dissolved oxygen levels (3.1 to 6.7mgL-1) and may suggest eutrophication. By contrast, biochemical oxygen demand, percentage O2 saturation and total phosphorous (which are eutrophication indicators) do not show non-compliant levels, according to local legislation. Although the monitoring stations surround a municipal centre, the estuary is downstream from this area, the main uses of which are artisanal fisheries, nature conservation, leisure and aquaculture. Therefore, continuous monitoring and long-term analysis of the resulting water quality are important.

Effect of Green Macroalgal Blooms on the Behavior, Growth, and Survival of Cockles (Clinocardium nuttallii) in Pacific NW Estuaries.

Nutrient over-enrichment can produce adverse ecological effects within coastal ecosystems and negatively impact the production of ecosystem goods and services. In small estuaries of the U.S. Pacific Northwest, seasonal blooms of green macroalgae (GMA; Family Ulvaceae) are primarily associated with natural nutrient input, rather than anthropogenic sources. This provided us a unique opportunity to investigate the effects of naturally-stimulated macroalgal blooms on intertidal bivalves. Clinocardium nuttallii (heart cockles) are an important species for shellfisheries in the region. In summer population surveys, we found that cockles emerged from the sediment with greater frequency as GMA biomass increased. Experimental manipulation of GMA biomass in the field showed that GMA elicited emergence, evoked above-ground lateral movement, inhibited shell growth, and increased mortality (by 34.0 ± 15.2%) in cockles. Laboratory experiments revealed that the interaction of a weighted barrier at the sediment surface and GMA presence elicited rapid emergence among cockles. Risk assessment of the emergence response in cockles showed that the in situ emergent population experienced 11.0 ± 8.0% mortality due to gull predation, while laboratory exposure to elevated temperatures (≥34 °C) slowed valve-closure, inhibited reburial, and increased mortality, which could have translated to 7.1 ± 1.5% in situ mortality. We found that cockles avoided mortality due to burial below GMA mats by emerging from the sediment, but that behavior consequently put them at risk of mortality due to heat stress or gull predation. Regardless of nutrient source, our research showed that GMA blooms pose a threat to the survival of intertidal bivalves.

Challenges to quantifying glass eel abundance from large and dynamic estuaries

Abstract European eel Anguilla anguilla recruitment into the rivers of the northeastern Atlantic has declined substantially since the 1980s. Monitoring of recruiting juveniles, or glass eels, is usually undertaken in small estuaries and rivers. Sampling of large-scale estuaries is rare, due to the size of the sampling area and the resources needed to provide adequate sampling levels. Here we describe surveys for glass eels in the UK’s largest estuarine system, the Severn Estuary/Bristol Channel. We sampled across a 20 km-wide stretch of the estuary in 2012 and 2013, using a small-meshed net deployed from a commercial fishing trawler, and the surveys yielded over 2500 glass eels. Eels were more abundant in the surface layer (0–1.4 m depth) than at depth (down to 8.4 m depth), were more abundant close to the south shore than along the north shore or middle of the estuary, and were more abundant in lower salinity water. Numbers were higher in the second year than in the first and eels were more abundant in February than April. The difficulties and logistics of sampling in such a large estuary are discussed, along with the level of resources required to provide robust estimates of glass eel abundance.

Influence of a Drought Event on Hydrological Characteristics of a Small Estuary on the Amazon Mangrove Coast

The effects of atypical climatic conditions, such as those of a drought event, are remarkably accentuated in minor estuaries filled with sediments and with reduced or sporadic freshwater input, where the salinity intrusion is pronounced. To understand these effects, hydrological and hydrodynamic parameters were evaluated during a drought period in a small estuary located on the eastern Amazon coast in northern Brazil. Five campaigns were conducted between June 2012 and June 2013. Samples were collected from the surface and bottom layer every 3 h over a 25-h period at three stations of the Taperacu Estuary. To compare drought and post-drought periods, in terms of salinity and chlorophyll-a, data was recorded until June 2015. Taperacu is a relatively shallow estuary of the Amazon coastal zone, which is characterized by the absence of any direct fluvial discharge, although it does receive freshwater input from adjacent wetlands, as well as less saline waters from the Caete Estuary through the Taici Creek. Hydrological variables were controlled by rainfall levels and the tidal range, and the water became more saline and more oxygenated, with reduced dissolved nutrient and chlorophyll-a concentrations when precipitation decreased. A significant variation was found between the months of June 2012 (most intense drought) and 2013 (less intense drought). The connection to the neighboring Caete Estuary and adjacent mangroves and wetlands contributed to the influx of nutrient-enriched waters. Overall, then, it is hoped that the results of this study can contribute to the understanding of the effects of drought events in other minor estuaries on the highly indented Amazon coast, as well as in other areas of the equatorial zone with similar environmental characteristics.

Use of gill nets and telemetry in tracking movements and feeding of striped bass (Morone saxatilis), bluefish (Pomatomus saltatrix), and weakfish (Cynoscion regalis) at a salinity front in a small estuary

Use of gill nets and telemetry in tracking movements and feeding of striped bass (Morone saxatilis), bluefish (Pomatomus saltatrix), and weakfish (Cynoscion regalis) at a salinity front in a small estuary

Micro-estuary – a new estuary type recognised for South African conditions

Ezemvelo KwaZulu-Natal Wildlife embarked on a programme to identify all the estuaries within the KwaZulu-Natal (KZN) province. Following an aerial survey along the coastline in 2012, images of all the visible inlets and estuaries were captured. Among these are a number of areas where flows of freshwater to the sea appeared to be present but which were not among the estuaries that had previously been named. There are already well defined and recognised estuary types being managed in South Africa in terms of existing environmental legislation. Following the initial survey and the observation that there are coastal inlets/freshwater outlets that are potentially small estuaries that had not been included among them prompted a further investigation into whether some of these inlets were in fact features that should be classified in some way or other. Based on a rapid qualitative assessment, 181 sites were classified as either a “micro-estuary”, “freshwater seep”, “hard-structure freshwater outflow point” or as sites that had been considerably modified by engineered structures. A total of 61 of these 181 sites are included in a new classification as micro-estuaries. Most of these systems are in a degraded condition and require intensive rehabilitation to restore them to their historical ecological function. This study emphasises the urgency of accepting “micro-estuary” as a new estuarine type to provide formal protection against further deterioration. This is the first study to provide a description and spatially define these smaller systems present along the KZN coast.

Seasonal population dynamics and energy consumption by waterbirds in a small temperate estuary

Simple measures of population dynamics and energy consumption can provide baseline information on the role of consumers in food webs, particularly for cryptic or highly-mobile species of waterbirds. We provide estimates of the seasonal population dynamics and energy consumption of waterbirds along the Kowie Estuary, South Africa. Ten census counts were conducted every month along the estuary from June 2013 to May 2014. Energy consumption and fresh-matter intake were calculated based on body-mass equations. Piscivorous birds dominated the waterbird assemblage during summer (up to 289 individuals), whereas non-migratory shorebirds were dominant at other times of the year. The total wet mass of prey items ingested by waterbirds ranged from 2.8 kg ha−1 during winter to 8.5 kg ha−1 during summer. The total energy consumption of waterbirds ranged from 12 543 kJ ha−1 during June to 33 104 kJ ha−1 during December. Shannon–Wiener diversity calculations revealed that the Kowie Estuary had a greater diversity of waterbirds than several other South African estuaries, but less diversity than many large European estuaries. Studies that incorporate census counts and energy consumption measures, although rudimentary, may provide valuable information on resource use by waterbirds in estuaries and may benefit conservation management schemes.

Conflictive uses of coastal areas: A case study in a southern European coastal lagoon (Ria de Alvor, Portugal)

Estuaries and coastal lagoons are naturally stressed and highly variable ecosystems, and are also frequently exposed to strong anthropogenic pressures. Such pressures can be particularly pronounced in small systems such as the Ria de Alvor, a small tidal lagoon in southern Portugal. The Ria de Alvor is a priority area for conservation, being a RAMSAR wetland of international importance since 1996 and is part of the European Ecological Network, Natura 2000. Nevertheless, intensive anthropogenic uses exert increasing pressures on its ecological features, causing stresses and challenges which are addressed in this paper. The resources that the Ria de Alvor provides are both marine and terrestrial in nature, and are subject to various kinds of exploitation. Urban, industrial and tourist developments, as well as agriculture and animal rearing, have resulted in habitat loss and change, altered morphology and hydrodynamics, and the discharge of effluents into the system. This paper reviews the key features and issues existing in the Ria and highlights the need for more research into this and other small estuaries and their management.

Tidal amplitude and fish abundance in the mouth region of a small estuary.

Using an acoustic underwater camera (Dual Frequency IDentification SONar, DIDSON), the abundance and direction of movement of fishes > 80 mm total length (LT ) in the mouth of a small South African estuary during spring and neap tidal cycles were observed. While the sizes of fishes recorded were consistent across both tide cycles, the number of fishes passing the camera was significantly greater during the smaller neap tides. Schooling behaviour was more pronounced for fishes that were travelling into the estuary compared to fishes swimming towards the ocean.

The relative influence of local and regional environmental drivers of algal biomass (chlorophyll-a) varies by estuarine location

A major question in restoring estuarine water quality is whether local actions to manage excess nutrients can be effective, given that estuaries are also responding to tidal inputs from adjacent water bodies. Several types of statistical analysis were used to examine spatially-detailed and long-term water quality monitoring data in eight sub-estuaries of Chesapeake Bay. These sub-estuaries are likely to be similar to other shallow systems with moderate to long water residence times. Statistical cluster analysis of spatial water quality data suggested that estuaries had spatially distinct water quality zones and that the peak algal biomass (as measured by chlorophyll-a) was most often controlled by local watershed inputs in all but one estuary, although mainstem inputs affected most estuaries at some times and places. An elasticity indicator that compared inter-annual changes in sub-estuaries to parallel changes in the mainstem Chesapeake Bay supported the idea that water quality in sub-estuaries was not strongly coupled to the mainstem. A cross-channel zonation of water quality observed near the mouth of estuaries suggested that Bay influences were stronger on the right side of the lower channel (looking up estuary) at times in all estuaries, and was most common in small estuaries closest to the mouth of the primary water source to the estuary. Where Bay influences were strong, estuarine water quality would be expected to be less responsive to nutrient reductions made in the local watershed. Regression analysis was used to evaluate hypothesized relationships between environmental driver variables and average chlorophyll-a (chl-a) concentrations. Chl-a values were calculated from unusually detailed levels of spatial sampling, potentially providing a more comprehensive view of system conditions than that provided by traditional sparse sampling networks. The univariate models with the best data support to explain variability in averaged chl-a concentration were those that reflected water residence time. Of the land cover variables tested, septic density in the riparian zone explained the most variance in chl-a. The multivariate models that most improved upon the residence time effect added TN or TP flows (normalized by volume) and suggested that chl-a will be less responsive to nutrient reductions in estuaries that are poorly flushed.

Isolation-hypoxia and re-oxygenation of the pallial cavity of female Crepipatella dilatata during estuarine salinity changes requires increased glyoxylase activity and antioxidant metabolism to avoid oxidative damage to female tissues and developing embryos

The estuarine slipper limpet Crepipatella dilatata is a gastropod that can survive prolonged periods of low salinities (< 24 PSU) caused by tidal changes and/or prolonged periods of rain. During low salinity events, C. dilatata can isolate its body from the outside environment, by sealing its shell against the substrate on which it grows. Prolonged isolation periods from the surrounding environment can greatly lower available oxygen levels inside of the pallial cavity, impacting on the physiology of both females and their incubated encapsulated embryos. When salinity levels return to normal, isolation is terminated and the inflow of seawater results in re-oxygenation. In this study we show that when re-oxygenation of the pallial cavity takes place, oxidative damage, in the form of increased levels of lipid peroxides and protein carbonyls, occurs in both maternal tissues and in incubated embryos. To avoid terminal oxidative damage both females and their embryos increase their levels of the glyoxalase pathway enzymes (GLX-I and GLX-II) and general antioxidant metabolism (SOD, CAT, GR, GPOX and GST). As a result the levels of oxidative damage decline to basal levels within 24 h of reoxygenation. Thus the combination of isolation, a behavioural strategy, combined with encapsulation of embryos and a capacity to up regulate relatively rapidly the glyoxylase pathway and general antioxidant metabolism, play major roles in facilitating the survival of C. dilatata in the small estuaries of Southern Chile.

Distribution of organic matter, phytopigments and heterotrophic bacteria along the salinity gradient in the estuaries of small rivers of the Tatar Strait basin

Distribution of total organic matter and its dissolved and suspended forms was investigated in two small estuaries with different morphometric characteristics, as Muchke and Toki Lakes, in late July 2014 at the low tide phase. The time of survey was distinguished by low river discharge and high tides. Content of all forms of organic matter and hydrocarbons was higher in the estuarine waters, as compared with fresh river water, regardless of salinity. The dissolved form prevailed (79.7-98.6 % of the total organic matter content) with concentrations of 5.2-35.7 mg/l. Chlorophyll a dominated (up to 87 %) among phytopigments in both estuaries that corresponded to active development of microalgae. Toki Lake was distinguished by higher productivity and microplankton abundance. On the contrary, allochthonous organic matter was more abundant in Muchke Lake, where interrelation between destructors (heterotrophic bacteria number) and primary producers (Chl a concentration) was observed. Oil-oxidizing microorganisms were up to 60 % of the heterotrophic bacteria number. The hydrocarbons content exceeded the maximal permissible level: 3.6 and 4.5 MPL in Muchke and Toki Lakes, respectively. Both estuaries were subjected to chronic hydrocarbon pressure.

Methane emissions from UK estuaries: Re-evaluating the estuarine source of tropospheric methane from Europe

We report measurements of dissolved methane (CH4) and turbidity in axial surveys of six UK inner estuaries between February 2000 and October 2002: the Humber, Forth, Tamar, Tyne, Tees, and Tay. Dissolved CH4 was always supersaturated relative to air and strong spatial and temporal variability was a notable feature. Super-saturation was highest in the Tyne (max. 107,725%; mean 26,348±30,330%) and lowest in the Tay (max. 1294%; mean 584±425%). All six inner estuaries were atmospheric CH4 sources throughout their surveyed reaches. Broad mid-estuarine CH4 maxima were characteristic of all inner estuaries except the Tay and are consistent with substantial CH4 inputs from intertidal flats. In the Humber, Forth and Tay maximal CH4 in the low salinity turbidity maximum zone (TMZ) implied additional large CH4 inputs at these locations but overall CH4 — turbidity relationships were complex, potentially reflecting interactions between CH4 inputs in the TMZ and from intertidal sediments, with estuarine hydrodynamics. CH4 flux densities (emissions per unit area) varied over an order of magnitude, some of the highest values occurring in relatively small estuaries (e.g. Tees and Tyne). Evidently overall CH4 emissions from inner estuaries are disproportionate to area extent. Combining our measurements with all relevant published data, applying an aerially weighted approach that discriminated between inner and outer estuaries and using a revised estimate of the total European estuarine area, we derived total (inner plus outer) estuarine CH4 emissions for the UK and Europe as follows: UK, 5.8±5.8×109gyr−1; Europe (including UK), 2.7±6.8×1010gyr−1. We estimate the individual contributions to these totals from inner and outer estuaries at ~25% and 75% respectively. Our figure for European estuaries is around an order of magnitude lower than an earlier estimate that set this equivalent to 2–13% of total marine CH4 emissions. Adjusting for our revised estuarine area and for wind speeds that we consider to be more realistic, this comes more into line with our revised synthesis.

Hydrographic and dissolved oxygen variability in a seasonal Pacific Northwest estuary

Hypoxia is an issue of growing concern for coastal communities. In the California Current System, a prototypical eastern boundary current, attention has been focused on explaining the trend of increasing shelf hypoxia. Despite the regional focus on hypoxia in eastern boundary regions, relatively few studies have examined smaller estuarine systems. Here, we present results from an observational study in Coos Bay, a small estuary on the southern Oregon coast, subject to seasonal upwelling/downwelling winds, strong tides, and wide fluctuations in freshwater input. Coos Bay exhibits characteristics of a salt-wedge type estuary under high river discharge conditions (>150 m3 s−1), a well-mixed estuary under low discharge conditions (0–30 m3 s−1), and partially-mixed estuary during times of moderate discharge (30–150 m3 s−1). The observed vertical stratification and along-estuary salinity gradients correlate significantly with river discharge and tidal forcing. Despite a strong coupling with coastal waters where hypoxia has been present, we do not find evidence for pervasive hypoxia in Coos Bay. We find that upwelling on the shelf advects low dissolved oxygen water into the estuary on synoptic timescales. Early in the upwelling season (April and May), dissolved oxygen minima are found at the estuary mouth, while later in the summer (September), dissolved oxygen minima are found at the riverine end, presumably due to decreased discharge and increased productivity. However, in a given year, the overall strength of the upwelling season is not a good predictor of low dissolved oxygen levels in the estuary.

Tidal-Flat Macrobenthos as Diets of the Japanese Eel Anguilla japonica in Western Japan, with a Note on the Occurrence of a Parasitic Nematode Heliconema anguillae in Eel Stomachs.

Dietary items of the Japanese eel Anguilla japonica inhabiting estuaries were examined by analyses of the gut (stomach and intestine) contents in two areas in Kyushu, western Japan. In a small estuary in Kagoshima Bay, where seven eel guts were examined, almost all of the dietary organisms consisted of Hemigrapsus crabs and Hediste polychaetes, both of which commonly occurred on tidal flats of this site during our survey on the macrobenthic fauna. In another large estuary in the innermost part of the Ariake Sea, where 14 eel guts were examined, 11 macrobenthic species (nine crustaceans, a polychaete, and a gastropod) were found in the gut contents, mostly consisting of mudflat-specific species. The dietary items are almost completely different not only between the two estuaries, but also among three neighboring sites within the large estuary in the Ariake Sea. These results show that Japanese eels feed on various macrobenthic invertebrates inhabiting estuarine tidal flats at each site. The variety of the prey species occupying different habitats indicates that their foraging areas extend to a wide range of estuarine tidal flats from the upper to lower littoral zones. The physalopterid nematode Heliconema anguillae was found parasitic in eel stomachs in both estuaries. The prevalence of the nematode was higher in the estuary in Kagoshima Bay (100%) than that in the Ariake Sea (43%), although the intensity in the former (4-94 nematodes per infected stomach) was comparable to that of the latter (2-96). The relationship between the nematode infection and the dietary items of Japanese eels is discussed.

Long-term physical, chemical and biological changes in a small, urban estuary

The Diep River estuary, a small estuary in suburban Cape Town, South Africa, has been subject to disturbance for centuries. Several earlier studies have documented conditions in the system, providing baselines against which to measure more recent changes. This study: (i) describes major physical and hydrological changes that have occurred within this estuary; (ii) documents faunistic changes subsequent to earlier biological surveys; and (iii) provides an up-to-date faunal list. Salinity measurements and both invertebrate and fish samples were taken at five stations along the estuary in summer and winter 2014. A census of sandprawn Callichirus kraussi densities was also undertaken to compare with earlier surveys. Developments within the Diep River catchment and estuary have resulted in extensive changes in flow and salinity regimes, causing marked reductions in summer salinity levels, changes in frequency of mouth closure, and deteriorations in water quality. These have resulted in major changes in faunal composition and distribution, including an increase in numbers of non-indigenous species. Surveys in the early 1950s recorded 47 invertebrate species, whereas only 23 were found in 1974. A total of 23 species were again recorded in 2014, but these included several freshwater forms not previously reported, which had entered the system due to lowered salinity values, as well as new alien introductions. Only six of the 69 taxa recorded were reported by all three surveys. There have been substantial declines in sandprawn abundance, from 40 million in 1998 to just over 12 million in 2014. In all, 12 fish species were recorded in the 1950s, nine in 1974, but only five in 2014, including the newly detected invasive mosquito fish Gambusia affinis and the translocated tilapia Tilapia sparrmanii. Thus, only three of the original native fish species remain. Contrary to these losses, the present bird fauna appear to be more abundant and diverse than previously. Regular monitoring is recommended to obtain a clearer understanding of ongoing changes, and major management interventions will be needed if further degradation is to be prevented.