The Chinese softshell turtle (CST; Pelodiscus sinensis) is an important freshwater aquaculture species with high economic value. CST is farmed throughout Asia, especially in China and Taiwan. However, the presence of diseases, particularly those caused by the Bacillus cereus group, poses significant threats to commercial CST farming. A recent study has unveiled new genospecies within the B. cereus group, Bacillus shihchuchen. Within this group, strain QF108–045 stands out for its high virulence, notably leading to severe septicemia in CST. This study aimed to explore the transcriptome and pathophysiological changes in CSTs infected with QF108–045. Upon infection with QF108–045, turtles exhibited upregulation of Toll-like receptor (TLR) 2, 4, and 5, among which, TLR5 was significantly upregulated. Activation of TLR signaling leading to elevated levels of IL-1β, TNFα, and Th17 cytokines, which subsequently activate nuclear factor kappa B (NF-κB). CSTs challenged with QF108–045 exhibited a substantial decrease packed cell volume, indicating severe hemolysis. The notable upregulation of transferrin, ZIP8/14, and HO-1 indicates an active transfer of iron or heme into cells, and melanomacrophages in the spleen showed a positive signal in Perl's Prussian blue staining, implying their importance as essential iron storage cells. However, despite the hemolysis, ferroptosis was inhibited by the upregulation of system Xc− related genes. Additionally, our study revealed a notable increase in TLR5 expression following immunization with recombinant flagellin from QF108–045, coupled with analysis of protein tertiary docking modules. These findings advance our understanding of defense mechanisms in CSTs during QF108–045 infection, providing valuable insights for future vaccine development efforts.
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