Side-chain Groups Research Articles

Reversible electrochemical triggering and optical interrogation of polylysine α-helix formation

Reversible electrochemical triggering of the random coil to α-helix conformational transition of polylysine (Lys10, Lys20, Lys50) was accomplished at a Pt electrode at potentials < |1| V vs. Ag/AgCl. Direct electroreduction of the N-terminus vs ε-amino groups in Lys sidechains, as well as hydronium reduction and electrolysis, could be easily distinguished and deconvolved using differential pulse voltammetry. Electrochemistry was coupled with in situ UV absorbance and circular dichroism spectroscopies to dynamically follow the evolution of α-helix formation at different potentials. Isotope experiments in H2O vs. D2O unequivocally confirm that direct electroreduction of ε-NH3+/ND3+ groups in Lys sidechains, rather than electrochemically generated pH gradient-induced deprotonation, leads to subsequent α-helix formation. The site-selective electrochemistry and optical methodologies presented herein can be generalized and extended to interrogate other protonation-sensitive biomolecular systems, and potentially provide access to early intermediates and control over the dynamic structural evolution of peptides and proteins.

Hindered Rotations of Protein Asparagine/Glutamine Side-Chain NH2 Groups: Impact of Hydrogen Bonding with DNA

Hindered rotation about an sp2 C-N bond is known to occur in arginine (Arg), asparagine (Asn), and glutamine (Gln) side chains of proteins. However, very little is known about the rotational dynamics of Asn and Gln side-chain NH2 groups. Here, using a unique NMR method, we quantitatively characterized the hindered rotations of protein Asn/Gln side-chain NH2 groups. This NMR method yields simple NH2-selective spectra that allow for an accurate determination of the kinetic rate constants for the hindered rotations. Through the NMR measurements at different temperatures, we investigated the energy barriers that restrict the C-N bond rotations of protein side-chain NH2 groups. Through a comparison of the kinetic data for the free and DNA-bound states of the Antp homeodomain, we also examined the impact of hydrogen bonding on the hindered rotations of the side-chain NH2 groups. Our data suggest that the hydrogen bonding increases the energy barriers by 1-6 kJ/mol.

Vibrational Study on Structure and Bioactivity of Protein Fibers Grafted with Phosphorylated Methacrylates.

In the last decades, silk fibroin and wool keratin have been considered functional materials for biomedical applications. In this study, fabrics containing silk fibers from Bombyx mori and Tussah silk fibers from Antheraea pernyi, as well as wool keratin fabrics, were grafted with phosmer CL and phosmer M (commercial names, i.e., methacrylate monomers containing phosphate groups in the molecular side chain) with different weight gains. Both phosmers were recently proposed as flame retarding agents, and their chemical composition suggested a possible application in bone tissue engineering. IR and Raman spectroscopy were used to disclose the possible structural changes induced by grafting and identify the most reactive amino acids towards the phosmers. The same techniques were used to investigate the nucleation of a calcium phosphate phase on the surface of the samples (i.e., bioactivity) after ageing in simulated body fluid (SBF). The phosmers were found to polymerize onto the biopolymers efficiently, and tyrosine and serine underwent phosphorylation (monitored through the strengthening of the Raman band at 1600 cm−1 and the weakening of the Raman band at 1400 cm−1, respectively). In grafted wool keratin, cysteic acid and other oxidation products of disulphide bridges were detected together with sulphated residues. Only slight conformational changes were observed upon grafting, generally towards an enrichment in ordered domains, suggesting that the amorphous regions were more prone to react (and, sometimes, degrade). All samples were shown to be bioactive, with a weight gain of up to 8%. The most bioactive samples contained the highest phosmers amounts, i.e., the highest amounts of phosphate nucleating sites. The sulphate/sulphonate groups present in grafted wool samples appeared to increase bioactivity, as shown by the five-fold increase of the IR phosphate band at 1040 cm−1.

Exploring the Effects of Methylation on the CID of Protonated Lysine: A Combined Experimental and Computational Approach.

We report the results of experiments, simulations, and DFT calculations that focus on describing the reaction dynamics observed within the collision-induced dissociation of l-lysine-H+ and its side-chain methylated analogues, Nε-methyl-l-lysine-H+ (Me1-lysine-H+), Nε,Nε-dimethyl-l-lysine-H+ (Me2-lysine-H+), and Nε,Nε,Nε-trimethyl-l-lysine-H+ (Me3-lysine-H+). The major pathways observed in the experimental measurements were m/z 130 and 84, with the former dominant at low collision energies and the latter at intermediate to high collision energies. The m/z 130 peak corresponds to loss of N(CH3)nH3-n, while m/z 84 has the additional loss of H2CO2 likely in the form of H2O + CO. Within the time frame of the direct dynamics simulations, m/z 130 and 101 were the most populous peaks, with the latter identified as an intermediate to m/z 84. The simulations allowed for the determination of several reaction pathways that result in these products. A graph theory analysis enabled the elucidation of the significant structures that compose each peak. Methylation results in the preferential loss of the side-chain amide group and a reduction of cyclic structures within the m/z 84 peak population in simulations.

Structure-Property Relationships of PFSA-Based Ionomer Thin Films

In energy conversion devices (e.g. fuel cells), the ionomer layer within the heterogeneous catalyst layers (CLs) exhibits increased mass transport resistance, hindering device performance. This increased resistance is attributed to confinement effects of the ionomer to nanoscale thicknesses and greater influence of the ionomer-catalyst interactions under confinement. Chemical modifications to the ionomer side chains have the potential to improve transport and/or alter ionomer-catalyst interactions to overcome the performance limitations. To understand the impact of side chain and end group modifications, we investigate the structure-property relationships of perfluoro sulfonic acid (PFSA)-based ionomers thin films (20 to 100 nm) synthesized by 3M. Thin film water uptake and conductivity are determined via spectroscopic ellipsometry and electrochemical impedance spectroscopy (EIS), respectively, under controlled humidity and correlated with structural changes during hydration characterized via in situ grazing-incidence x-ray scattering (GIXS). The collected data are analyzed to draw structure-hydration-conductivity maps for various film chemistries and used to identify the chemical and structural factors controlling ionomer functionality. The results provide insight into the improvements and limitations on performance attainable by these PFSA-based chemistries. Furthermore, the impact of side chain chemistry on structure-property relationships can be used to guide ionomer design for improved device performance.

Highly selective turn-on red fluorescence probes for visualization of the G-quadruplexes DNA in living cells

Studies on small molecule fluorescent probes for detecting G-quadruplexes DNA have bring about an extensive attention in recent years. In this paper, we designed and synthesized three benzothiazole derivatives named 2a-2c under moderate reaction conditions and investigated their interactions with DNA (single-stranded, duplex, i-motif and G-quadruplex) and distribution in living cell. Three compounds present a large Stokes shift (∼90 nm) and a weak red fluorescence emission, and they exhibit a good selectivity and sensitive turn-on fluorescence response for the promoter G-quadruplex DNA (bcl-2, c-myc and c-kit 2) and mitochondria G-quadruplex (KSS). The affinity of 2a and 2b with N-alkyl side chain group to DNA is stronger than that of 2c with an anion group, therefore, they also increase the stability of the G-quadruplex structure. 2b induces the conformational change of both bcl-2 and KSS G-quadruplexes, while all compounds induce the folding of bcl-2 from the coiled structure to the hybrid G-qrudruplex. Three compounds interact with the G-quadruplex DNA mainly by end-stacking mode. Furthermore, MTT assays and confocal fluorescence images show that these compounds can enter the living HepG2 cells with low cytotoxicity. 2a-2c are mainly located in the mitochondrion and interacted with mitochondria G-quadruplex DNA, while only weak fluorescence can be found in cell nucleus. In a word, 2a-2c can be implied in image of G-quadruplex DNA in living cells.

Characterization of Conjugates between α-Lactalbumin and Benzyl Isothiocyanate—Effects on Molecular Structure and Proteolytic Stability

In complex foods, bioactive secondary plant metabolites (SPM) can bind to food proteins. Especially when being covalently bound, such modifications can alter the structure and, thus, the functional and biological properties of the proteins. Additionally, the bioactivity of the SPM can be affected as well. Consequently, knowledge of the influence of chemical modifications on these properties is particularly important for food processing, food safety, and nutritional physiology. As a model, the molecular structure of conjugates between the bioactive metabolite benzyl isothiocyanate (BITC, a hydrolysis product of the glucosinolate glucotropaeolin) and the whey protein α-lactalbumin (α-LA) was investigated using circular dichroism spectroscopy, anilino-1-naphthalenesulfonic acid fluorescence, and dynamic light scattering. Free amino groups were determined before and after the BITC conjugation. Finally, mass spectrometric analysis of the BITC-α-LA protein hydrolysates was performed. As a result of the chemical modifications, a change in the secondary structure of α-LA and an increase in surface hydrophobicity and hydrodynamic radii were documented. BITC modification at the ε-amino group of certain lysine side chains inhibited tryptic hydrolysis. Furthermore, two BITC-modified amino acids were identified, located at two lysine side chains (K32 and K113) in the amino acid sequence of α-LA.

Effects of Different Quick-freezing Methods on Protein Properties of Largemouth Bass( Lateolabrax japonicus )

In this paper, largemouth bass is used as raw material to study the effects of different cooling rates(liquid nitrogen quick freezing(1.81 ℃), freezing liquid quick freezing(0.15 ℃), flat plate quick freezing(0.14 ℃)) in freezing storage(0, 1, 2, 4, 12, 24 weeks), the influence of the physical and chemical properties of sea bass protein, by measuring the salt-soluble protein, sulfhydryl group, carbonyl group, Ca2+-ATPase activity content, surface hydrophobicity, endogenous fluorescence spectrum and protein composition changes in the fish meat, and using double factor variance and correlation analysis study quick-freezing method and storage time to investigate the degeneration of fish protein after freezing. The results showed that with the passage of frozen storage time, the value of salt-soluble protein showed a downward trend: The plate group and liquid nitrogen group had the lowest and the highest at the end of the frozen storage, respectively; the activity values of sulfhydryl and Ca2+-ATPase both increased first and then decreased. The endogenous fluorescence intensity of fibrin increased, resulting in a blue shift phenomenon, and the value of myofibrillar protein carbonyl and surface hydrophobicity increased significantly(P<0.05). The results of SDS-PAGE electrophoresis showed that myofibrillar protein was degraded during the freezing period, while the liquid nitrogen group had a faster cooling rate and a slower degree of protein degradation, while the plate group was the opposite. The volume of ice crystals formed by quick freezing of liquid nitrogen was similar to the distribution of water in the raw material, which was conducive to storage. Compared with liquid nitrogen quick freezing, the time for the formation of the maximum ice crystal zone in the quick freezing of liquid nitrogen was longer than that of liquid nitrogen quick freezing and shorter than that of flat quick freezing, and there was not much difference between the two. The correlation analysis between the two-factor variance and the indicators showed that the quick freezing method had a significant effect on the active sulfhydryl group and the maximum fluorescence intensity of myofibril protein(P<0.05). The freezing time was the main factor affecting the protein of the sea bass. The oxidative modification of amino acid side chain groups in myofibrillar protein was the main factor causing the degradation or aggregation of protein.

Post-translational Lysine Ac(et)ylation in Bacteria: A Biochemical, Structural, and Synthetic Biological Perspective.

Ac(et)ylation is a post-translational modification present in all domains of life. First identified in mammals in histones to regulate RNA synthesis, today it is known that is regulates fundamental cellular processes also in bacteria: transcription, translation, metabolism, cell motility. Ac(et)ylation can occur at the ε-amino group of lysine side chains or at the α-amino group of a protein. Furthermore small molecules such as polyamines and antibiotics can be acetylated and deacetylated enzymatically at amino groups. While much research focused on N-(ε)-ac(et)ylation of lysine side chains, much less is known about the occurrence, the regulation and the physiological roles on N-(α)-ac(et)ylation of protein amino termini in bacteria. Lysine ac(et)ylation was shown to affect protein function by various mechanisms ranging from quenching of the positive charge, increasing the lysine side chains’ size affecting the protein surface complementarity, increasing the hydrophobicity and by interfering with other post-translational modifications. While N-(ε)-lysine ac(et)ylation was shown to be reversible, dynamically regulated by lysine acetyltransferases and lysine deacetylases, for N-(α)-ac(et)ylation only N-terminal acetyltransferases were identified and so far no deacetylases were discovered neither in bacteria nor in mammals. To this end, N-terminal ac(et)ylation is regarded as being irreversible. Besides enzymatic ac(et)ylation, recent data showed that ac(et)ylation of lysine side chains and of the proteins N-termini can also occur non-enzymatically by the high-energy molecules acetyl-coenzyme A and acetyl-phosphate. Acetyl-phosphate is supposed to be the key molecule that drives non-enzymatic ac(et)ylation in bacteria. Non-enzymatic ac(et)ylation can occur site-specifically with both, the protein primary sequence and the three dimensional structure affecting its efficiency. Ac(et)ylation is tightly controlled by the cellular metabolic state as acetyltransferases use ac(et)yl-CoA as donor molecule for the ac(et)ylation and sirtuin deacetylases use NAD+ as co-substrate for the deac(et)ylation. Moreover, the accumulation of ac(et)yl-CoA and acetyl-phosphate is dependent on the cellular metabolic state. This constitutes a feedback control mechanism as activities of many metabolic enzymes were shown to be regulated by lysine ac(et)ylation. Our knowledge on lysine ac(et)ylation significantly increased in the last decade predominantly due to the huge methodological advances that were made in fields such as mass-spectrometry, structural biology and synthetic biology. This also includes the identification of additional acylations occurring on lysine side chains with supposedly different regulatory potential. This review highlights recent advances in the research field. Our knowledge on enzymatic regulation of lysine ac(et)ylation will be summarized with a special focus on structural and mechanistic characterization of the enzymes, the mechanisms underlying non-enzymatic/chemical ac(et)ylation are explained, recent technological progress in the field are presented and selected examples highlighting the important physiological roles of lysine ac(et)ylation are summarized.

Artificial Metal-Peptide Assemblies: Bioinspired Assembly of Peptides and Metals through Space and across Length Scales.

The exploration of chiral crystalline porous materials, such as metal-organic complexes (MOCs) or metal-organic frameworks (MOFs), has been one of the most exciting recent developments in materials science owing to their widespread applications in enantiospecific processes. However, achieving specific tight-affinity binding and remarkable enantioselectivity toward important biomolecules is still challenging. Perhaps most critically, the lack of adaptability, compatibility, and processability in these materials severely impedes practical applications in chemical engineering and biological technology. In this Perspective, artificial metal-peptide assemblies (MPAs), which are achieved by the assembly of peptides and metals with nanometer-sized cavities or pores, is a new development that could address the current bottlenecks of chiral porous materials. Bioinspired assembly of pore-forming MPAs is not foreign to biological systems and has granted scientists an unprecedented level of control over the chiral recognition sites, conformational flexibility, cavity sizes, and hydrophilic segments through ultrafine-tuning of peptide-derived linkers. We will specifically discuss exemplary MPAs including structurally well-defined metal-peptide complexes and highly crystalline metal-peptide frameworks. With insights from these structures, the peptide assembly and folding by the closer cooperation of metal coordination and noncovalent interactions can create adaptable protein-like nanocavities undergoing a myriad of conformational variations that is reminiscent of enzymatic pockets. We also consider challenges to advancing the field, where the deployment of side-chain groups and manipulation of amino acid sequences are more likely to access the programmable, genetically encodable peptide-mediated porous materials, thus contributing to the enhanced enantioselective recognition as well as enabling key biochemical processes in next-generation versatile biomimetic materials.

A moisture-tolerant route to unprotected \u03b1/\u03b2-amino acid N-carboxyanhydrides and facile synthesis of hyperbranched polypeptides

A great hurdle in the production of synthetic polypeptides lies in the access of N-carboxyanhydrides (NCA) monomers, which requires dry solvents, Schlenk line/gloveboxe, and protection of side-chain functional groups. Here we report a robust method for preparing unprotected NCA monomers in air and under moisture. The method employs epoxy compounds as ultra-fast scavengers of hydrogen chloride to allow assisted ring-closure and prevent NCA from acid-catalyzed decomposition under moist conditions. The broad scope and functional group tolerance of the method are demonstrated by the facile synthesis of over 30 different α/β-amino acid NCAs, including many otherwise inaccessible compounds with reactive functional groups, at high yield, high purity, and up to decagram scales. The utility of the method and the unprotected NCAs is demonstrated by the facile synthesis of two water-soluble polypeptides that are promising candidates for drug delivery and protein modification. Overall, our strategy holds great potential for facilitating the synthesis of NCA and expanding the industrial application of synthetic polypeptides.

3D printed‐polylactic acid scaffolds coated with natural rubber latex for biomedical application

AbstractThree‐dimensional (3D) printing is a rapidly growing technology and plays an emerging role in several biomedical applications. Polylactic acid (PLA) is one of the most common materials in 3D printing, however, it is chemically inert due to the absence of reactive side chain groups. In this context, in this work, the PLA scaffolds with two different geometries were produced and coated with natural rubber latex (NRL) extracted from the rubber tree Hevea brasiliensis. NRL presents bioactive substances that are related to its biological properties. The results revealed scaffolds with interconnected pores and pores sizes from 600 to 1300 μm. The NRL coatings caused a decrease in pore size. Infrared spectra showed that 2 NRL layers were more efficient in coverage. Compressive strength values obtained are in agreement with the spongy bones value (22–24 MPa for crossbar and 20–22 MPa for roundbar cube). Finally, the hemolytic activity of the PLA scaffold was 3%, while the scaffolds coated with 1 and 2 NRL layers presented values of 0%, indicating a potential use in biomedical applications due to the absence of hemolytic effects.

CPLM 4.0: an updated database with rich annotations for protein lysine modifications.

Here, we reported the compendium of protein lysine modifications (CPLM 4.0, http://cplm.biocuckoo.cn/), a data resource for various post-translational modifications (PTMs) specifically occurred at the side-chain amino group of lysine residues in proteins. From the literature and public databases, we collected 450 378 protein lysine modification (PLM) events, and combined them with the existing data of our previously developed protein lysine modification database (PLMD 3.0). In total, CPLM 4.0 contained 592 606 experimentally identified modification events on 463 156 unique lysine residues of 105 673 proteins for up to 29 types of PLMs across 219 species. Furthermore, we carefully annotated the data using the knowledge from 102 additional resources that covered 13 aspects, including variation and mutation, disease-associated information, protein-protein interaction, protein functional annotation, DNA & RNA element, protein structure, chemical-target relation, mRNA expression, protein expression/proteomics, subcellular localization, biological pathway annotation, functional domain annotation, and physicochemical property. Compared to PLMD 3.0 and other existing resources, CPLM 4.0 achieved a >2-fold increase in collection of PLM events, with a data volume of ∼45GB. We anticipate that CPLM 4.0 can serve as a more useful database for further study of PLMs.

Visualized and Quantitative Conformational Analysis of Peptidomimetics.

Protein–protein interactions (PPIs) are fundamentally important and challenging drug targets. Peptidomimetic molecules of various types have been developed to modulate PPIs. A particularly promising drug discovery strategy, structural peptidomimetics, was designed based on special mimicking of side-chain Cα–Cβ bonds. It is simple and versatile. Nevertheless, no quantitative method has been established to evaluate its similarity to a target peptide motif. We developed two methods that enable visual, comprehensive, and quantitative analysis of peptidomimetics: peptide conformation distribution (PCD) plot and peptidomimetic analysis (PMA) map. These methods specifically examine multiple side-chain Cα–Cβ bonds of a peptide fragment motif and their corresponding bonds (pseudo-Cα–Cβ bonds) in a mimetic molecule instead of φ and ψ angles of a single amino acid in the traditional Ramachandran plot. The PCD plot is an alignment-free method, whereas the PMA map is an alignment-based method providing distinctive and complementary analysis. Results obtained from analysis using these two methods indicate our multifacial α-helix mimetic scaffold 12 as an excellent peptidomimetic that can precisely mimic the spatial positioning of side-chain functional groups of α-helix. These methods are useful for visualized and quantified evaluation of peptidomimetics and for the rational design of new mimetic scaffolds.

Promotion of 11/9‐helical folding in α/β‐peptides containing β2‐homoalanine residue

AbstractThe 11/9‐helix is one of nontraditional helices available to α/β‐peptides with alternating residue types. Several β‐amino acid residues are known to promote 11/9‐helical folding with two types of intramolecular hydrogen bonds. Both β2‐amino acids and β3‐amino acids are common acyclic β‐amino acids that can be regarded as homologs of α‐amino acids with the same side chain group. However, β2‐amimo acids have not been widely used as much as β3‐amino acids partly because β2‐residue is believed to be not as strong as β3‐residue in promoting a distinct conformation. Here we report 11/9‐helical folding of α/β‐peptides that consist of L‐α‐alanine and (S)‐β2‐homoalanine with residue alternation. In addition, circular dichroism study reveals that β2‐homoalanine promotes 11/9‐helical folding more strongly than β3‐homoalanine in polar protic solvent conditions.

Transient Receptor Potential channels (TRP) in GtoPdb v.2021.3

Transient Receptor Potential channels (TRP) in GtoPdb v.2021.3

Study of the molecular orientation of steroidal side chains at polyimide surfaces using sum frequency generation vibrational spectroscopy.

The molecular orientation of steroidal side chains at rubbed polyimide (PI) surfaces is studied by sum frequency generation (SFG) vibrational spectroscopy. The main objective is to find a correlation between the molecular structure of the PI film and the liquid crystal alignment on the polymer. Analysis of the SFG spectra shows that rubbing of the polymer film appears to cause conformational changes in the methyl group of the polymer side chain near the steroidal structure. However, rubbing does not significantly influence the orientation of the isopropyl group at the end of the polymer side chain. This shows that the liquid crystal alignment is not correlated with the orientation of the isopropyl group.

A comprehensive study on low-temperature oxidation chemistry of cyclohexane. I. Conformational analysis and theoretical study of first and second oxygen addition

To understand the low-temperature oxidation chemistry of cyclohexane, conformational analysis and theoretical study of the first and second oxygen addition are performed using quantum chemical calculations and kinetic calculations. Pressure- and temperature-dependent rate constants and branching ratios for major reaction channels are determined with RRKM/master-equation simulations over 298–2000 K and 0.01–1000 bar. The theoretical results indicate that the rapid inversion-topomerization processes facilitate fast equilibrium between axial and equatorial conformers. This can greatly counterbalance the influence of initial positions of side-chain groups in ROO, QOOH, cis-OOγQOOH and trans-OOγQOOH conformers. Conformational effects are found to be influential on the chain branching reaction sequences in second oxygen addition. The carbon ring prevents the conventional intramolecular H-transfer of cis-OOγQOOH conformers to yield ketohydroperoxides, as well as the inversion-topomerization from cis-OOγQOOH conformer to trans-OOγQOOH conformers. cis-OOγQOOH conformers mainly undergo alternative isomerization channel (cis-OOγQOOH→γP(OOH)2→alkenylhydroperoxides+OH→oxy radical+OH+OH), while trans-OOγQOOH conformers have both conventional isomerization channel (trans-OOγQOOH→ketohydroperoxides+OH→oxy radical+OH+OH) and alternative isomerization channel (trans-OOγQOOH→γP(OOH)2→alkenylhydroperoxides+OH→oxy radical+OH+OH). Kinetic calculation results also support the application of the thumb rule widely used in acyclic alkane oxidation that the rate constant of QOOH+O2 is roughly half of that of R+O2 in cyclic alkane oxidation, while it is indicated that estimating the rate constants of OOQOOH reactions from similar reactions of ROO may cause significant uncertainties.

Enhancing the healing ability and charge transport thermal stability of a diketopyrrolopyrrole based conjugated polymer by incorporating coumarin groups in the side chains

AbstractIn this paper, we present a new design strategy for healable polymeric semiconductors, which are demanding for the future flexible electronics, by incorporating coumarin groups in the polymer side chains. The selection of coumarin groups is based on the fact that photo‐dimerization can occur to coumarins upon UV light irradiation, thus side chains of conjugated polymers with coumarins can be cross‐linked. The photo‐crosslinking of side chains has negligible effect on the thin film morphology and interchain packing order for the DPP‐based conjugated polymer PDPP4T‐DCM with coumarins in the side chains. However, the photo‐crosslinking can facilitate the repair of the mechanically damaged thin film of PDPP4T‐DCM and the recovery of the semiconducting properties. Additionally, the photo‐crosslinking due to the coumarins in the side chains can lock thin film morphology and thus improve the thermal stability of charge transport.

Thermoresponsive nanocomposite hydrogels with high mechanical strength and toughness based on a dual crosslinking strategy

AbstractThe practical application of thermoresponsive poly(N‐isopropylacrylamide) (PNIPAM) hydrogels are severely limited by their poor mechanical properties. Herein, we reported a series of dual crosslinked (DC) PNIPAM hydrogels with superior mechanical properties prepared by simple copolymerization of N‐isopropylacrylamide and sodium acrylate (SA) in the laponite RDS suspension, following by a soaking process in multivalent metal cations (e.g., Ca2+, Al3+, Fe3+) aqueous solutions to form ionic coordination interactions with COO groups of copolymer side chains. The effect of laponite RDS, AANa (sodium acrylate), and metal cation (e.g., Fe3+) concentrations on the mechanical properties and deswelling properties of the DC hydrogels are evaluated. The DC hydrogel prepared with 10 w/v% laponite RDS, 0.25 mol/L AANa and 0.45 mol/L Fe3+ possesses the best mechanical properties (ca. 1.1 MPa of tensile strength, 9.1 MPa of compression strength at 80% of compression strain, 1.4 MPa of elastic modulus and 1.3 MJ/m3 of toughness). Moreover, we also discovered that the DC hydrogels crosslinked by Fe3+ showed better mechanical properties due to the larger charge and ion radius of Fe3+.