We analyze how decoherence appears in the $I\text{\ensuremath{-}}V$ characteristics of a voltage-biased single-Cooper-pair transistor. Especially the effect on resonant single or several Cooper-pair tunneling is studied. We consider both a symmetric and an asymmetric transistor. As a decoherence source we use a small resistive impedance $(\text{Re}[Z(\ensuremath{\omega})]⪡{R}_{Q}=h/4{e}^{2})$ in series with the transistor, which provides both thermal and quantum fluctuations of the voltage. Additional decoherence sources are quasiparticle tunneling across the Josephson junctions and quantum $f$ noise caused by spurious charge fluctuators nearby the island. The analysis is based on a real-time diagrammatic technique which includes Zeno-type effects in the charge transport, where the tunneling is slowed down due to strong decoherence. As compared to the Pauli-master-equation treatment of the problem, the present results are more consistent with experiments where many of the predicted sharp resonant structures are missing or weakened due to decoherence.