Sessile Communities Research Articles

Exploring the antibiofilm potential of chitosan nanoparticles by functional modification with chloroquine and deoxyribonuclease

Planktonic bacteria tend to form sessile community architectures to shield resident bacteria from various environmental stresses. The formed biofilm leads to the failure of conventional antimicrobial therapy. Extracellular macromolecules, including extracellular DNA (eDNA), proteins, lipids, and polysaccharides, crosslink into gel-like structures through electrostatic forces in the mature biofilm matrix. The stereo-structural integrity and chemical inertia of the extracellular polymeric matrix result in comprehensive antimicrobial resistance to antibacterial polysaccharides. Herein, an ionic gelation method was employed to functionalize cationic chitosan nanoparticles (CSNPs) with chloroquine and deoxyribonuclease. The modification involved shifting eDNA chirality through a DNA-intercalating agent, chloroquine, and hydrolyzing an eDNA scaffold with deoxyribonuclease. The antibiofilm activity was assessed against a standard Staphylococcus aureus strain and clinical subtype isolates. Functional modifications targeting eDNA improved the chitosan anti-biofilm efficiency (residual biomass decreased from 74.2 to 90.3 % to 16.7–24.6 %) by disrupting the biofilm matrix. The functional CSNPs worked as a sensitizer prodrug, contributing to a bactericidal process of chitosan itself (cell wall damage increased from 11.38–18.16 % to 55.2–61.4 %) by dispersing the biofilm-enclosed bacteria. In vivo, the bacterial burden of infected mouse joints was reduced by 4.1 lg CFU/mL. Our results indicate the potential of this chitosan-based anti-infection strategy in biofilm-related infections.

The pH-Insensitive Antimicrobial and Antibiofilm Activities of the Frog Skin Derived Peptide Esc(1-21): Promising Features for Novel Anti-Infective Drugs.

The number of antibiotic-resistant microbial infections is dramatically increasing, while the discovery of new antibiotics is significantly declining. Furthermore, the activity of antibiotics is negatively influenced by the ability of bacteria to form sessile communities, called biofilms, and by the microenvironment of the infection, characterized by an acidic pH, especially in the lungs of patients suffering from cystic fibrosis (CF). Antimicrobial peptides represent interesting alternatives to conventional antibiotics, and with expanding properties. Here, we explored the effects of an acidic pH on the antimicrobial and antibiofilm activities of the AMP Esc(1-21) and we found that it slightly lost activity (from 2- to 4-fold) against the planktonic form of a panel of Gram-negative bacteria, with respect to a ≥ 32-fold of traditional antibiotics. Furthermore, it retained its activity against the sessile form of these bacteria grown in media with a neutral pH, and showed similar or higher effectiveness against the biofilm form of bacteria grown in acidic media, simulating a CF-like acidic microenvironment, compared to physiological conditions.

Investigating the interactive effects of habitat type and light intensity on rocky shores

Light availability and habitat complexity are two key drivers of community assembly. Urbanisation has been shown to affect both, with important consequences to ecological communities. On the intertidal, for instance, studies have shown that light intensity is greater on natural rocky shores than on less complex artificial habitats (seawalls), though different habitats can also experience similar light intensities, for example when shaded by urban structures. Understanding therefore how these factors individually, and combined, affect communities is important to understand the mechanisms driving changes in community structure, and consequently provide solutions to tackle the increasing homogenisation of habitats and lightscapes in urbanised spaces through smart infrastructure designs. Here, we assessed how different light levels affect the recruitment of communities in rock pools and on emergent rock on an intertidal rocky shore. We cleared 30 patches of emergent rock and 30 rock pools and manipulated light using shades with different light transmissions (full light, procedural control, 75%, 35%, and 15% light transmission, full shade) and assessed mobile and sessile communities monthly for 6 months. Effects of reducing light levels were generally stronger on rock than in pools. Fully shaded plots supported double the amount of mobile organisms than plots in full sunlight, in both habitats. Algal cover was higher in pools compared to rock, and at intermediate light levels, but effects varied with site. This study highlights the importance of variable light conditions and different habitats for rocky shore communities, which should be considered in future coastal developments to retain natural biodiversity.

Neighbourhood benthic configuration reveals hidden co-occurrence social diversity.

Ecological interactions among benthic communities are crucial for shaping marine ecosystems. Understanding these interactions is essential for predicting how ecosystems will respond to environmental changes, invasive species, and conservation management. However, determining the prevalence of species interactions at the community scale is challenging. To overcome this challenge, we employ tools from social network analysis, specifically exponential random graph modelling (ERGM). Our approach explores the relationships among animal and plant organisms within their neighbourhoods. Inspired by companion planting in agriculture, we use spatiotemporal co-occurrence as a measure of mixed species interaction. In other words, the variety of community interactions based on co-occurrence defines what we call 'co-occurrence social diversity'. Our objective is to use ERGM to quantify the proportion of interactions at both the simple paired level and the more complex triangle level, enabling us to measure and compare co-occurrence social diversity. Applying our approach to the Spanish coastal zone across eight sites, five depths, and sunlit/shaded aspects, we discover that 80% of sessile communities, consisting of over a hundred species, exhibit co-occurrence social diversity, with 5% of species consistently forming associations with other species. These organism-level interactions probably have a significant impact on the overall character of the site. This article is part of the theme issue 'Connected interactions: enriching food web research by spatial and social interactions'.

Morphology shapes community dynamics in early animal ecosystems

The driving forces behind the evolution of early metazoans are not well understood, but key insights into their ecology and evolution can be gained through ecological analyses of the in situ, sessile communities of the Avalon assemblage in the Ediacaran (~565 million years ago). Community structure in the Avalon is thought to be underpinned by epifaunal tiering and ecological succession, which we investigate in this study in 18 Avalon communities. Here we found that Avalon communities form four distinctive Community Types irrespective of succession processes, which are instead based on the dominance of morphologically distinct taxa, and that tiering is prevalent in three of these Community Types. Our results are consistent with emergent neutrality, whereby ecologically specialized morphologies evolve as a consequence of neutral (stochastic or reproductive) processes within niches, leading to generalization within the frond-dominated Community Type. Our results provide an ecological signature of the first origination and subsequent loss of disparate morphologies, probably as a consequence of community restructuring in response to ecological innovation. This restructuring led to the survival of non-tiered frondose generalists over tiered specialists, even into the youngest Ediacaran assemblages. Such frondose body plans also survive beyond the Ediacaran–Cambrian transition, perhaps due to the greater resilience afforded to them by their alternative ecological strategies.

Environmental impact on marginal coastal benthic communities within the Jeju Island, South Korea temperate transition zone

Aim of studyMarine climatic transition zones are boundary areas of major climate zones, here the boundary between the subtropical and temperate zones. They present areas containing high abundance of organisms living at the limit of their physiological tolerance. These marginal populations are particularly sensitive to changes in their environment. As such, marine climatic transition zones are excellent natural playgrounds for climate change-related hypothesis testing, especially with respect to marine habitat response to ocean warming. The marginal biogenic habitats around Jeju Island, South Korea, which lies within the temperate transition zone, have gradually changed from macroalgal-dominated to hard coral-dominated habitats. Understanding the specific abiotic environmental factors that influence the distribution of the marginal populations in temperate transition zones (i.e., species at their occurrence limit) is crucial to predicting and managing temperate zone habitat changes caused by climate change. This study aims to identify the specific abiotic environmental factors that contribute to explaining the current spatial distribution of the declining temperate and expanding subtropical foundation species in Jeju waters.MethodsCoverage and composition of sessile benthic communities were determined by photo-quadrat analysis at two depths (10 m and 15 m) at three sites along the island’s south, east, and north coasts in May and November 2022. Divergences in community composition between sites were characterized in light of ten quantitative environmental parameters.ResultsOur results show that sessile foundation communities vary significantly at different sites around the island. While the south is defined by high-latitude hard corals, predominately Alveopora japonica, the east is defined by the temperate canopy-forming macroalga Ecklonia cava, and the north is characterized by coralline algae. Winter sea surface temperature, water transparency, nutrient concentration, and water movement were statistically the most impactful environmental factors determining which foundation species constitute each distinct benthic community.ConclusionThis study provides valuable baseline information on the impacts of abiotic environmental factors on marine sessile communities in a temperate transition zone.

Does the incorporation of shell waste from aquaculture in the construction of marine facilities affect the structure of the marine sessile community?

The growth of the human population causes significant harm to ecosystems, directly affecting the biological diversity of coastal areas by replacing natural habitats with artificial structures such as breakwaters, ports, and marinas. The hard substrate from those marine facilities lacks the topographic complexity of natural habitats. Because of that, artificial habitats usually do not support a diverse community to the same extent as rocky shores in the surroundings. To address this issue and bring a strategic solution to the improper disposal of shell waste from aquaculture farms, we evaluated how increasing the environmental heterogeneity of walls by incorporating mussel and oyster shells on artificial concrete affected the diversity of sessile organisms from the subtidal zone. Adding shells to concrete positively affected ascidians' richness. Substrates with added shells supported more species than flat substrates in total. They promoted species that did not occur on flat substrates that simulated the traditional walls of marinas and harbors. However, it did not affect the number of bryozoans and the average species richness. Consequently, incorporating shells resulted in communities with completely distinct structures from those on flat substrates. Adding shells affected the community structure, reducing the dominance by the exotic bryozoan Schizoporella errata, and promoting the occurrence of other groups, such as ascidians. Using shell residues from aquaculture on marina walls adds substrate for colonization. Still, it is also likely to provide refuges for fragile and vulnerable organisms, like crevices and pits in natural habitats. Because of that, the increment in diversity was mostly group-specific and restricted to ascidians. This research reinforces the importance of creating complex artificial coastal structures, inspired by the blue economy, for a more heterogeneous coverage of sessile communities and reduced presence and dominance of exotic species. Thus, the strategy tested here, besides the effects on the sessile community, also supports efforts to reduce inappropriate waste disposal in the environment.

Biology and epibiont community of the red decorator crab, Schizophrys aspera, on the southern Great Barrier Reef

Organismal symbioses are fundamental to biodiversity, evolution, and ecosystem functioning. On coral reefs, many decapod species have formed distinct epibiotic symbioses through decoration tendencies that enhance diet, camouflage, and defence. The red decorator crab, Schizophrys aspera (Majidae: Decapoda), has a broad Indo-Pacific distribution and is a successful predator of juvenile crown-of-thorns seastars (CoTS; Acanthaster sp.). However, little is known of the biology and decorating symbioses of S. aspera on the Great Barrier Reef (GBR), where CoTS pose ongoing management challenges. We characterised S. aspera and its epibiont community collected in coral rubble patches on the southern GBR. S. aspera predominantly used sponges (94 ± 1%; mean ± SE) in its decoration, with greater proportions of the carapace covered for juveniles (58 ± 5%) and females (46 ± 4%) compared to males (24 ± 4%). In short-term (8-d) experiments, S. aspera substantially reduced sponge (31%) and algal (47%) cover on rubble pieces, demonstrating its potential to alter sessile communities. The close association of S. aspera with sponges and algae likely reflects its diet and enhances camouflage and chemical defence in its coral rubble niche on the GBR. As sessile taxa are often noxious, we postulate that these symbioses may confer resilience of S. aspera to plancitoxins in its consumption of CoTS. Evaluating how epibiont diversity and biochemistry shape the habitat associations, distribution, and role of S. aspera as predator and prey may be important to understanding its ability to mediate CoTS densities on the GBR and elsewhere.

The impact of habitat complexity on the structure of marine sessile communities and larvae supply

Coastal infrastructure replaces complex and heterogeneous natural habitats with flat, two-dimensional concrete walls, reducing refuges against predation, which modifies the composition and identity of the dominant species in sessile communities. This modification in the community structure can also change the reproductive propagules available in plankton, affecting the recruitment dynamics in communities from natural habitats nearby. Here, we tested the combined effects of the habitat type (simple vs. complex with holes) and predation on the diversity, larval production, and structure of sessile communities from a recreational marina. Complex substrates showed a larger biomass and a greater abundance of solitary organisms, mainly ascidians and bivalves, that benefited from refuges. Barnacles and calcified encrusting bryozoans dominated simple, flat substrates. The difference in dominance affected the pool of larvae produced by the communities. After eight months, communities growing on flat substrates produced more barnacle larvae than those from complex substrates, where larvae of ascidians were more abundant. However, this difference disappeared after 18 months of community development. The difference in the pool of larvae between simple and complex substrates did not affect the structure of the community on flat substrates nearby, which was determined by the predation regime. In the studied region, communities in artificial environments are under intense predation control, suppressing eventual recruitment differences in communities developing in flat substrates. Large interventions that modify habitat topography, creating refuges in the subtidal zone, can change the dynamic of the sessile communities in artificial habitats and, consequently, the larval supply in the vicinities. However, differences in larval supply will only translate in distinct sessile communities when the scale of intervention encompasses large areas, and other processes do not buffer the differences in recruitment.

Biofilm Formation Capability of Cowpea Nodular Bacterial Isolates in Static Microcosms

Bacteria are known to form microbially derived sessile communities that are irreversibly attached to biotic or abiotic surfaces known as biofilms. Biofilm formation is an adaptive strategy for the successful colonization of plant surfaces. Forty bacterial isolates of cowpea nodules from 12 smallholder farms in Northern Nigeria were evaluated for biofilm growth, attachment and strength in static microcosms. Replicate King’s B (KB) microcosms (n = 8) were incubated statically for 7 days before assessments. Growth and attachment were determined by measuring optical density (OD600nm) and absorbance (A570 nm) respectively. Strength (grams) was determined by maximum deformation mass (MDM) assay using glass balls (mean weight of 0.0115g). A significant MDM was recorded when more than one replicate retained at least one ball for at least 5 seconds. One-way Analysis of Variance (ANOVA) was used to determine significant mean differences (p<0.05). Similarities and variations in biofilm formation were assessed by Hierarchical Cluster Analysis (HCA) using the Ward method. Half of the isolates showed good biofilm growth and attachment. Twelve of the 40 isolates showed various levels of strength. Isolates 16F and 39L were rated well in all three biofilm parameters. There were significant differences in the mean values of the assessed biofilm parameters among the isolates. Mean growth ranged between 1.493 (Isolate 32K) and 2.101 OD600 (Isolate 19G). Mean attachment levels (A570) ranged from 0.084 (Isolate 9D) to 1.543 (Isolate 30K). Only isolate 2A had significantly higher biofilm strength (2.412g) than the rest of the isolates. HCA analysis indicated similarities as well as variations in biofilm formation by isolates within and between sites. Isolates from all the study sites were positive for at least one of the tested biofilm parameters. The ability of the isolates to form biofilms indicated that some of them could be suitable for biotechnological applications such as in biofertilizer production

Utilizing the Autonomous Reef Monitoring Structure (ARMS) to study the temporal variation of benthic community on coral reef ecosystems in Pemuteran, Bali, Indonesia

Tracking changes in community composition in the coral reef ecosystem is essential, mainly to understand the complexities of the ecosystem and its long-term response to environmental and anthropogenic threats. A standardized method sensitive to changes and comparable across sites is needed to provide robust data helpfully. We used a standardized monitoring protocol Autonomous Reef Monitoring Structure (ARMS), to investigate the growth of marine sessile communities and observe variations in motile taxa (decapods) composition through time. Eighteen units of ARMS were deployed at a depth of ∼10–15 m in the coral reef ecosystem in Pemuteran, Bali, Indonesia; three units were then recovered every two months for one year. The sessile community in each ARMS plate was then photographed and annotated using a web-based annotation tool called CoralNet, while the motile decapods were identified using their morphological characteristics. We observed twenty-four benthic categories of sessile communities and three infraorder of decapods across the sampling duration. The sessile community was contributed mainly by Encrusting Sponge, Brown Flesh Algae, and Bryozoan in almost every sampling duration. The ANOVA result shows that the composition is significantly different over time, showing apparent changes in composition. However, the NMDS result indicated similar structure composition during the ARMS’s time retrieval. Future research on temporal changes in benthic diversity can be used to understand the dynamic more about relationship between motile and sessile and how their interaction can affect the coral reef community.

Negative and positive interspecific interactions involving jellyfish polyps in marine sessile communities.

Sessile marine invertebrates on hard substrates are one of the two canonical examples of communities structured by competition, but some aspects of their dynamics remain poorly understood. Jellyfish polyps are an important but under-studied component of these communities. We determined how jellyfish polyps interact with their potential competitors in sessile marine hard-substrate communities, using a combination of experiments and modelling. We carried out an experimental study of the interaction between polyps of the moon jellyfish Aurelia aurita and potential competitors on settlement panels, in which we determined the effects of reduction in relative abundance of either A. aurita or potential competitors at two depths. We predicted that removal of potential competitors would result in a relative increase in A. aurita that would not depend on depth, and that removal of A. aurita would result in a relative increase in potential competitors that would be stronger at shallower depths, where oxygen is less likely to be limiting. Removal of potential competitors resulted in a relative increase in A. aurita at both depths, as predicted. Unexpectedly, removal of A. aurita resulted in a relative decrease in potential competitors at both depths. We investigated a range of models of competition for space, of which the most successful involved enhanced overgrowth of A. aurita by potential competitors, but none of these models was completely able to reproduce the observed pattern. Our results suggest that interspecific interactions in this canonical example of a competitive system are more complex than is generally believed.

Marked inter-strain heterogeneity in the differential expression of some key stress response and virulence-related genes between planktonic and biofilm cells in Listeria monocytogenes

Listeria monocytogenes is a facultatively intracellular pathogenic bacterium that can provoke invasive listeriosis, a severe foodborne infection in humans. Outside the host, this is capable to survive for long periods in soil, and water, as well as on plants, while, like many other microorganisms, this can also attach to abiotic surfaces, such as food contact ones, forming biofilms on them. It has been suggested that inside those sessile communities, L. monocytogenes cells not only display an increased stress tolerance but may also boost their pathogenicity. In this work, the expression of ten key stress response and/or virulence-related genes (i.e., groEL, hly, iap, inlA, inlB, lisK, mdrD, mdrL, prfA, and sigB) was studied in three different L. monocytogenes strains (AAL20066, AAL20107, and PL24), all isolated from foods and each belonging to a different listeriosis-associated serovar (1/2a, 1/2b, and 1/2c, respectively). For this, each strain was initially left to develop a mature biofilm on a model polystyrene surface (Petri dish) by incubating for 144 h (6 days) at 20 °C in tryptone soya broth (with medium renewal every 48 h). Following incubation, both biofilm and the surrounding free-swimming (planktonic) cells were recovered, and their gene expressions were comparatively evaluated through targeted reverse transcription-quantitative polymerase chain reactions (RT-qPCR). Results revealed a strain-dependent differential gene expression between the two cell types. Thus, for instance, in strain AAL20107 (ser. 1/2b) biofilm growth worryingly resulted in a significant overexpression of all the studied genes (P < 0.05), whereas in strain PL24 (ser. 1/2c), the expression of most genes (8/10) did not change upon biofilm growth, with only two of them (groEL and hly) being again significantly upregulated. Such transcriptomic strain variability in stress adaptation and/or virulence induction should be generally considered in the physiological studies of pathogenic biofilms and preferably upon designing and implementing novel and more efficient eradication methods.

Unexpected biotic homogenization masks the effect of a pollution gradient on local variability of community structure in a marine urban environment

Urbanization of coastal habitats, often exemplified by harbors and marinas, has led to various ecological paradigms, questioning the functioning of these new ecosystems. In the present study we investigated, in a large Mediterranean harbor, whether spatial variation of pollution is present and if this variability drives the structure of the sessile community. We hypothesized locations to have significantly different communities, based on the assumption on the occurrence of environmental gradients of pollution that would constitute selective filters. Three distinct community types were identified in June, coinciding with spatially variable contaminants in sediments. We observed then an unexpected shift of the community between June and August associated to a sharp decrease in biodiversity and a decline of most species, masking the effects of local variation and thus leading to the homogenization of the biodiversity within the harbor. This shift coincided with successive heatwaves (the longest lasting 13 days over 25 °C, with a thermal peak at 28 °C) which might potentially be associated with a die-off in the harbor communities, regardless of location.

Monitoring Non-Indigenous Species with Passive Sampling Methods in an Oceanic Island

The synergistic effects of biological invasions have long been considered significant causes of biodiversity loss worldwide. Therefore, early detection monitoring is crucial in mitigating nonindigenous species (NIS) threats. In the marine environment, settlement plates were used as monitoring devices in ports, but this method was mainly applied to assess the sessile benthic community and is less efficient in collecting the mobile biota and accessing its diversity. Moreover, as the potential expansion of NIS to the surrounding coastal environment is still poorly understood, a pilot study was conducted focusing on two aspects: (i) improving the feasibility of the settling method under different environmental contexts and (ii) enhancing the capacity of the developed prototypes to collect more representative samples (i.e., sessile and mobile biota). Three different prototypes were designed: a box prototype consisting of PVC plates encapsulated by a plastic bottle, a CD prototype with CDs surrounded by a net, and a PVC prototype with uncovered PVC plates. The prototypes were deployed inside a marina and in an outside area on Madeira Island, Portugal. Results indicate that the PVC prototype was the most efficient regarding monitoring the sessile community, whereas the box prototype showed the highest abundance of the mobile fauna. The location influenced both the sessile community composition and the number of mobile taxa. Our findings suggest combining features from prototypes to encompass the whole benthic community better.

A desiccated dual-species subaerial biofilm reprograms its metabolism and affects water dynamics in limestone

Understanding the impact of sessile communities on underlying materials is of paramount importance in stone conservation. Up until now, the critical role of subaerial biofilms (SABs) whether they are protective or deteriorative remains unclear, especially under desiccation. The interest in desiccated SABs is raised by the prediction of an increase in drought events in the next decades that will affect the Mediterranean regions' rich stone heritage as never before. Thus, the main goal of this research is to study the effects of desiccation on both the biofilms' eco-physiology and its impacts on the lithic substrate. To this end, we used a dual-species model system composed of a phototroph and a chemotroph to simulate biofilm behavior on stone heritage. We found that drought altered the phototroph-chemotroph balance and enriched the biofilm matrix with proteins and DNA. Desiccated SABs underwent a shift in metabolism to fermentation and a decrease in oxidative stress. Additionally, desiccated SABs changed the water-related dynamics (adsorption, evaporation, and wetting properties) in limestone. Water absorption experiments showed that desiccated SABs protected the stone from rapid water uptake, while a thermographic survey indicated a delay in water evaporation. Spilling-drop tests revealed a change in the wettability of the stone-SAB interface, which affected the water transport properties of the stone. Finally, desiccated SABs reduced stone swelling in the presence of water vapor. The biodeteriorative and bioprotective implications of desiccated SABs on the stone were ultimately assessed.

Bacterial, Archaeal, and Eukaryote Diversity in Planktonic and Sessile Communities Inside an Abandoned and Flooded Iron Mine (Quebec, Canada)

Abandoned and flooded ore mines are examples of hostile environments (cold, dark, oligotrophic, trace metal) with a potential vast diversity of microbial communities rarely characterized. This study aimed to understand the effects of depth, the source of water (surface or groundwater), and abiotic factors on the communities present in the old Forsyth iron mine in Quebec (Canada). Water and biofilm samples from the mine were sampled by a team of technical divers who followed a depth gradient (0 to 183 m deep) to study the planktonic and sessile communities’ diversity and structure. We used 16S/18S rRNA amplicon to characterize the taxonomic diversity of Bacteria, Archaea, and Eukaryotes. Our results show that depth was not a significant factor explaining the difference in community composition observed, but lifestyle (planktonic/sessile) was. We discovered a vast diversity of microbial taxa, with taxa involved in carbon- and sulfur-cycling. Sessile communities seem to be centered on C1-cycling with fungi and heterotrophs likely adapted to heavy-metal stress. Planktonic communities were dominated by ultra-small archaeal and bacterial taxa, highlighting harsh conditions in the mine waters. Microbial source tracking indicated sources of communities from surface to deeper layers and vice versa, suggesting the dispersion of organisms in the mine, although water connectivity remains unknown.

Physical and biogenic complexity mediates ecosystem functions in urban sessile marine communities

AbstractThe influence of habitat complexity on biodiversity is a central theme in ecology, with many studies reporting positive relationships. Reconciliation approaches in urbanised areas, such as eco‐engineering, have increasingly focused on ‘re‐building’ the complexity of degraded and/or homogenised habitats to support biodiversity. Yet, the effects of increasing complexity and biodiversity on ecological functions are rarely measured.We assessed how increasing the physical and/or biogenic complexity of habitats affects the net primary productivity (NPP) and gross primary productivity (GPP), community respiration and nutrient cycling (specifically dissolved inorganic phosphorus and nitrogen) of intertidal sessile marine communities at three sites. We manipulated physical complexity using two types of settlement tiles: ‘complex’, with crevices and ridges, and ‘flat’. We increased biogenic complexity on half the replicates of each tile type by seeding with oysters.Increased physical and biogenic complexity resulted in greater sessile species richness at all sites. Although many variables assessed varied with sites and time of measurements, overall, GPP and NPP were greater on flat tiles than on complex ones. These patterns were not explained by differences in the total surface area of tiles.Daily flux rates of dissolved inorganic phosphorus had a significant positive relationship with biogenic complexity. There were no effects of biogenic or physical complexity on the net fluxes of dissolved inorganic nitrogen.Effects of habitat complexity on the productivity and nutrient cycling of marine sessile communities were largely unrelated to diversity measures, such as richness or abundance of key taxa and functional groups.Synthesis and applications. Eco‐engineering practices that manipulate habitat complexity might benefit from explicit functional targets that also consider associated ecosystem services, as we found that under some conditions there is a trade‐off between biodiversity and functional targets. Our results suggest that increasing habitat complexity has a positive effect on sessile species richness, but not necessarily on productivity (GPP and NPP). The species pool available as well as light availability is likely to mediate effects of complexity on assemblages, so local environment needs to be a key consideration when designing interventions.

Attenuation of Pseudomonas aeruginosa Virulence by Pomegranate Peel Extract.

Pseudomonas aeruginosa is an opportunistic pathogen often responsible for biofilm-associated infections. The high adhesion of bacterial cells onto biotic/abiotic surfaces is followed by production of an extracellular polysaccharidic matrix and formation of a sessile community (the biofilm) by the release of specific quorum-sensing molecules, named autoinducers (AI). When the concentrations of AI reach a threshold level, they induce the expression of many virulence genes, including those involved in biofilm formation, motility, pyoverdine and pyocyanin release. P. aeruginosa embedded into biofilm becomes resistant to both conventional drugs and the host's immune response. Accordingly, biofilm-associated infections are a major clinical problem underlining the need for new antimicrobial therapies. In this study, we evaluated the effects of pomegranate peel extract (PomeGr) in vitro on P. aeruginosa growth and biofilm formation; moreover, the release of four AI was assessed. The phenolic profile of PomeGr, exposed or not to bacteria, was determined by high-performance liquid chromatography coupled to electrospray ionization mass spectrometry (HPLC-ESI-MS) analysis. We found that bacterial growth, biofilm production and AI release were impaired upon PomeGr treatment. In addition, the PomeGr phenolic content was also markedly hampered following incubation with bacterial cells. In particular, punicalagin, punicalin, pedunculagin, granatin, di-(HHDP-galloyl-hexoside) pentoside and their isomers were highly consumed. Overall, these results provide novel insights on the ability of PomeGr to attenuate P. aeruginosa virulence; moreover, the AI impairment and the observed consumption of specific phenolic compounds may offer new tools in designing innovative therapeutic approaches against bacterial infections.

Remote reef cryptobenthic diversity: Integrating autonomous reef monitoring structures and in situ environmental parameters

Coral reef sessile organisms inhabiting cryptic spaces and cavities of the reef matrix perform vital and varied functional roles but are often understudied in comparison to those on exposed surfaces. Here, we assess the composition of cryptobenthic taxa from three remote tropical reef sites (Central Indian Ocean) alongside a suite of in situ environmental parameters to determine if, or how, significant patterns of diversity are shaped by local abiotic factors. To achieve this, we carried out a point-count analysis of autonomous reef monitoring structure (ARMS) plate images and employed in situ instrumentation to recover long-term (12 months) profiles of flow velocity, wave heights, temperature, dissolved oxygen, and salinity, and short-term (3 weeks) profiles of light and pH. We recovered distinct environmental profiles between sampling sites and observed that ocean-facing reefs experienced frequent but short-lived cooling internal wave events and that these were key in shaping in situ temperature variability. By comparing temperature and wave height profiles recovered using in situ loggers with ex situ models, we discovered that global satellite products either failed to recover site-specific profiles or both over- and underestimated actual in situ conditions. We found that site choice and recruitment plate face (top or bottom) significantly impacted the percentage cover of bryozoans, gastropods, soft and calcified tube worms, as well as crustose coralline algae (CCA) and fleshy red, brown, and green encrusting macroalgae on ARMS. We observed significant correlations between the abundance of bryozoans, CCA, and colonial tunicates with lower mean temperature and higher mean dissolved oxygen profiles observed across sites. Red and brown encrusting macroalgae abundance correlated significantly with medium-to-high flow velocities and wave height profiles, as well as higher pH and dissolved oxygen. This study provides the first insight into cryptobenthic communities in the Chagos Archipelago marine-protected area and adds to our limited understanding of tropical reef sessile communities and their associations with environmental parameters in this region. With climate change accelerating the decline of reef ecosystems, integrating analyses of cryptobenthic organisms and in situ physicochemical factors are needed to understand how reef communities, if any, may withstand the impacts of climate change.