Selection Method Research Articles

Comparative Analysis of ML Models with Selection Methods for Early Predictive Analytics of Sepsis in ICU

Objectives: This study aims to make early prediction of Sepsis using ML algorithms and provide comparative analysis of different feature selection techniques. Methods: In this study, the Physionet website dataset has been used. Sepsis categorization is done on the basis of Sepsis-3 criteria. The dataset used is highly imbalanced, with only 2% of the data belonging to Sepsis. The SmoteTomek technique is used to handle an imbalanced dataset. Various filter, embedded, and wrapper feature selection techniques, like tree-based feature selection technique, recursive feature elimination (RFE), information gain, Bhattacharya distance, lasso, etc., have been applied for the top-performing classification ML models. These selection techniques were applied to RandomForest, K Nearest Neighbors (KNN), and Decision Tree models. We compared the impact of these selection techniques on the aforesaid machine learning models. Findings: After applying the RFE technique, the Area Under the Receiver Operating Characteristic curve (AUROC) score of the RandomForest model has slightly increased from 0.996 to 0.9974. KNN model with a tree-based feature selection technique showed the highest sensitivity of 0.934. which is slightly higher than the sensitivity of 0.922, which was without applying any feature selection technique. Along with the AUROC score, the highest performance, in terms of specificity (0.9976), accuracy (0.9959), and f-measure score (0.9062), is achieved when RFE is applied to the RandomForest model. The best selection algorithm for decision trees and KNN is the tree-based selection technique. RFE is the best selection technique for RandomForest. Novelty: In this research, the AUROC score is slightly increased to 0.9974, which has not been achieved yet. Instead of 40, the number of features chosen is 20. This research also provides a comparison of different feature selection techniques like tree-based feature selection, information gain, Bhattacharya, and RFE. It also analyses their impact on the performance of models, which has not been done yet with the same set of selection techniques. Keywords: Sepsis, Machine Learning, Feature selection, Early prediction, Predictive Analytics

A sustainable HPTLC approach for green assessment of Tyrosine to phenylalanine ratio in chronic kidney disease

AbstractThe kidney is considered the main site for the net release of Tyrosine (Tyr) to the circulation through hydroxylation of Phenylalanine (Phe) using phenylalanine hydroxylase enzyme. In chronic kidney disease (CKD) patients the enzyme activity is impaired, therefore the serum concentration ratio of Tyr/Phe is reduced compared to healthy individuals. This motivates us to develop a cost effective, green, simple, sensitive, and selective HPTLC method to measure the levels of Tyr and Phe in serum samples. The analysis was carried out using acetonitrile: ethanol: 25% ammonia solution: ethyl acetate (6.5: 1.5: 1: 0.5) as a mobile phase. Rf values were 0.55 ± 0.05 for Phe and 0.39 ± 0.05 for Tyr. Densitometry scanning was performed using UV detector and dual wavelengths of 210 and 225 nm were obtained. A linear correlation was observed between the levels of Phe and Tyr, ranging from 50 to 700 ng band− 1 and 50 to 600 ng band− 1, respectively, under the optimum conditions. The method selectivity, linearity, precision, accuracy, and robustness were all confirmed in accordance with ICH recommendations. Calculations of the separation and resolution factors, number of theoretical plates, and height equivalent to theoretical plates prove to the chromatographic system accuracy and high separation efficiency. The developed method exhibits an acceptable eco-scale when measuring the method greenness using AGREE and GAPI softwares. It was applied for the determination of Phe and Tyr concentrations in human serum samples.

Ammonia and temperature sensing applications using fluorometric and colorimetric microparticles and polymeric films doped with BODIPY-emitters.

Fourfunctionalized BODIPY derivatives(BDP1 to BDP4) were synthesizedand their optical properties investigatedboth in solution and when incorporated into a solid matrix. Recognizing the versatility of BODIPY derivatives and the increasing interest in developing new luminescent organic dyes embedded in polymers, the BODIPY derivatives were dispersed into two types of polymeric matrices: Poly(methyl methacrylate) (PMMA) and Thermoplastic Polyurethane (TPU), both as films and microparticles. This resulted in eight new BODIPY-doped polymer films and eight types of BODIPY-doped polymeric microparticles for use in aqueous solutions. The integration of the BODIPY dyes into the polymeric matrices combines the unique properties of the polymer films, such as porosity, flexibility, and elasticity, with the excellent photophysical characteristics of the BODIPYs. Importantly, the dispersion minimized issues such as aggregation-caused quenching commonly observed in solid-state luminescent materials. The thermometric responses of all polymer films were evaluated by studying their solid-state emission spectra in the 25-200°C temperature range. The reversibility of these temperature-induced changes was also assessed, revealing excellent recovery of luminescence. These promising results suggest these materials could have applications as fluorescent thermometric sensors. Furthermore, we explored the potential of the brominated (BDP3) and chalcogenated (BDP4) BODIPY derivatives as ammonia sensors. The two derivatives produced yellow fluorescent products upon interaction with the analyte. Kinetic studies using solid-state emission spectra of BDP4@TPU and BDP4@PMMA showed significant differences in reaction rates (minutes for BDP4@TPU and hours in the case of BDP4@PMMA) attributable to the higher permeability of TPU when compared with PMMA. Detection and quantification of ammonia concentration were conducted by means of simple photographic analysis, measuring the "R" (red) and "G" (green) components of RGB color parameters. Theresults from the photographic method correlated well with the results from fluorimetric spectroscopy studies. The photographic analysis is straightforward, portable, and does not require expensive equipment. Finally, we successfully applied polymeric microparticles doped with BODIPYs to detect ammonia in water, demonstrating their effectiveness without the need for organic solvents. This highlights their potential for environmental monitoring and other applications requiring sensitive and selective detection methods.

Optimizing GEDI Canopy Height Estimation and Analyzing Error Impact Factors Under Highly Complex Terrain and High-Density Vegetation Conditions

The Global Ecosystem Dynamics Investigation (GEDI) system provides essential data for estimating forest canopy height on a global scale. However, factors such as complex topography and dense canopy can significantly reduce the accuracy of GEDI canopy height estimations. We selected the South Taihang region of Henan Province, China, as our study area and proposed an optimization framework to improve GEDI canopy height estimation accuracy. This framework includes correcting geolocation errors in GEDI footprints, screening and analyzing features that affect estimation errors, and combining two regression models with feature selection methods. Our findings reveal a geolocation error of 4 to 6 m in GEDI footprints at the orbital scale, along with an overestimation of GEDI canopy height in the South Taihang region. Relative height (RH), waveform characteristics, topographic features, and canopy cover significantly influenced the estimation error. Some studies have suggested that GEDI canopy height estimates for areas with high canopy cover lead to underestimation, However, our study found that accuracy increased with higher canopy cover in complex terrain and dense vegetation. The model’s performance improved significantly after incorporating the canopy cover parameter into the optimization model. Overall, the R2 of the best-optimized model was improved from 0.06 to 0.61, the RMSE was decreased from 8.73 m to 2.23 m, and the rRMSE decreased from 65% to 17%, resulting in an accuracy improvement of 74.45%. In general, this study reveals the factors affecting the accuracy of GEDI canopy height estimation in areas with complex terrain and dense vegetation cover, on the premise of minimizing GEDI geolocation errors. Employing the proposed optimization framework significantly enhanced the accuracy of GEDI canopy height estimates. This study also highlighted the crucial role of canopy cover in improving the precision of GEDI canopy height estimation, providing an effective approach for forest monitoring in such regions and vegetation conditions. Future studies should further improve the classification of tree species and expand the diversity of sample tree species to test the accuracy of canopy height estimated by GEDI in different forest structures, consider the distortion of optical remote sensing images caused by rugged terrain, and further mine the information in GEDI waveforms so as to enhance the applicability of the optimization framework in more diverse forest environments.

An efficient deep learning method for amino acid substitution model selection.

Amino acid substitution models play an important role in studying the evolutionary relationships among species from protein sequences. The amino acid substitution model consists of a large number of parameters; therefore, it is estimated from hundreds or thousands of alignments. Both general models and clade-specific models have been estimated and widely used in phylogenetic analyses. The maximum likelihood method is normally used to select the best fit model for a specific protein alignment under the study. A number of studies have discussed theoretical concerns as well as computational burden of the maximum likelihood methods in model selection. Recently, machine learning methods have been proposed for selecting nucleotide models. In this paper, we propose a method to measure substitution rates among amino acids (called summary statistics) from protein alignments to efficiently train a deep learning network of so-called ModelDetector for detecting amino acid substitution models. The ModelDetector network was trained from 2,246,400 alignments on a computer with 8 cores (without GPU) in about 3.3 hours. Experiments on simulation data showed that the accuracy of the ModelDetector was comparable with that of the maximum likelihood method ModelFinder. It was orders of magnitude faster than the maximum likelihood method in inferring amino acid substitution models and able to analyze genome alignments with millions of sites in minutes. The results indicate that the deep learning network can play as a promising tool for amino acid substitution model selection.

Population structure and selective signature analysis of local sheep breeds in Xinjiang, China based on high-density SNP chip.

The frigid and droughty climate of Xinjiang in China has given rise to unique indigenous sheep breeds with robust adaptability and resistance. To investigate the genetic mechanism of adaptability of Xinjiang sheep to the local extreme environment, we conducted population genetic structure analyses for three native Xinjiang sheep breeds: Altay sheep (ALT), Bashbay Sheep (BSBC), and Duolang sheep (DLC), as well as two foreign sheep breeds: Suffolk and Dorset, using the Ovine Infinium HD SNP BeadChip(680K). Our findings revealed distinct genetic and evolutionary histories between Xinjiang and foreign sheep breeds. Principal Component Analysis (PCA) and phylogenetic tree effectively differentiate these five sheep breeds based on their geographical origins, and the domestication level of Xinjiang sheep is comparatively lower than that of foreign sheep breeds. Furthermore, by utilizing three selective signature methods, namely Fixation Index (Fst), Cross Population Extended Haplotype Homozygosity Test (XP-EHH), and Nucleotide Diversity (π), we have successfully identified 22 potential candidate genes. Among these genes, there are TBXT, PDGFD, and VEGFA, which are closely related to tail type and lipid metabolism; VIL1, SLC11A1, and ZBTB46, which are associated with immune function; and candidate genes such as BNC1, HDAC1, and BMP5, which impact sheep reproductive traits. This study establishes a foundation for conserving and utilizing local sheep germplasm resources in Xinjiang and provides molecular insights into the genetic mechanisms governing sheep adaptation to extreme cold and arid environments.

Research on Well Selection Method for Intermittent Pumping in Oil Wells Based on the Analytic Network Process and Fuzzy Logic

In the later stages of oilfield development, the decline in oil well production and the increase in development costs, attributed to issues such as insufficient liquid supply, necessitate the implementation of intermittent pumping measures. However, current methods for selecting these wells lack comprehensiveness in the decision-making process. This article proposes a novel method for selecting intermittent pumping wells utilizing the analytic network process (ANP) and fuzzy logic. Initial surveys identified the main factors influencing intermittent pumping effectiveness. The ANP was employed to screen and integrate six core factors, including submergence depth and water cut. Subsequently, a fuzzy-logic-based model was developed, incorporating trapezoidal and rectangular membership functions to establish detailed correlations among the factors. The model’s efficacy was validated and tested using real-world data from the oilfield. Results indicate that the model’s assessments of intermittent pumping wells align closely with professional engineering judgments. This approach not only provides clear guidance for well selection but also demonstrates high scalability and adaptability across different oilfields by adjusting membership functions, thereby showcasing significant practical value.

Causality-Driven Feature Selection for Calibrating Low-Cost Airborne Particulate Sensors Using Machine Learning

With escalating global environmental challenges and worsening air quality, there is an urgent need for enhanced environmental monitoring capabilities. Low-cost sensor networks are emerging as a vital solution, enabling widespread and affordable deployment at fine spatial resolutions. In this context, machine learning for the calibration of low-cost sensors is particularly valuable. However, traditional machine learning models often lack interpretability and generalizability when applied to complex, dynamic environmental data. To address this, we propose a causal feature selection approach based on convergent cross mapping within the machine learning pipeline to build more robustly calibrated sensor networks. This approach is applied in the calibration of a low-cost optical particle counter OPC-N3, effectively reproducing the measurements of PM1 and PM2.5 as recorded by research-grade spectrometers. We evaluated the predictive performance and generalizability of these causally optimized models, observing improvements in both while reducing the number of input features, thus adhering to the Occam’s razor principle. For the PM1 calibration model, the proposed feature selection reduced the mean squared error on the test set by 43.2% compared to the model with all input features, while the SHAP value-based selection only achieved a reduction of 29.6%. Similarly, for the PM2.5 model, the proposed feature selection led to a 33.2% reduction in the mean squared error, outperforming the 30.2% reduction achieved by the SHAP value-based selection. By integrating sensors with advanced machine learning techniques, this approach advances urban air quality monitoring, fostering a deeper scientific understanding of microenvironments. Beyond the current test cases, this feature selection method holds potential for broader applications in other environmental monitoring applications, contributing to the development of interpretable and robust environmental models.

Impact of Feature Selection Techniques on the Performance of Machine Learning Models for Depression Detection Using EEG Data

Major depressive disorder (MDD) poses a significant challenge in mental healthcare due to difficulties in accurate diagnosis and timely identification. This study explores the potential of machine learning models trained on EEG-based features for depression detection. Six models and six feature selection techniques were compared, highlighting the crucial role of feature selection in enhancing classifier performance. This study investigates the six feature selection methods: Elastic Net, Mutual Information (MI), Chi-Square, Forward Feature Selection with Stochastic Gradient Descent (FFS-SGD), Support Vector Machine-based Recursive Feature Elimination (SVM-RFE), and Minimal-Redundancy-Maximal-Relevance (mRMR). These methods were combined with six diverse classifiers: Logistic Regression, Support Vector Machine (SVM), Random Forest, Extreme Gradient Boosting (XGBoost), Categorical Boosting (CatBoost), and Light Gradient Boosting Machine (LightGBM). The results demonstrate the substantial impact of feature selection on model performance. SVM-RFE with SVM achieved the highest accuracy (93.54%) and F1 score (95.29%), followed by Logistic Regression with an accuracy of 92.86% and F1 score of 94.84%. Elastic Net also delivered strong results, with SVM and Logistic Regression both achieving 90.47% accuracy. Other feature selection methods yielded lower performance, emphasizing the importance of selecting appropriate feature selection and machine learning algorithms. These findings suggest that careful selection and application of feature selection techniques can significantly enhance the accuracy of EEG-based depression detection.

LASSO-type instrumental variable selection methods with an application to Mendelian randomization.

Valid instrumental variables (IVs) must not directly impact the outcome variable and must also be uncorrelated with nonmeasured variables. However, in practice, IVs are likely to be invalid. The existing methods can lead to large bias relative to standard errors in situations with many weak and invalid instruments. In this paper, we derive a LASSO procedure for the k-class IV estimation methods in the linear IV model. In addition, we propose the jackknife IV method by using LASSO to address the problem of many weak invalid instruments in the case of heteroscedastic data. The proposed methods are robust for estimating causal effects in the presence of many invalid and valid instruments, with theoretical assurances of their execution. In addition, two-step numerical algorithms are developed for the estimation of causal effects. The performance of the proposed estimators is demonstrated via Monte Carlo simulations as well as an empirical application. We use Mendelian randomization as an application, wherein we estimate the causal effect of body mass index on the health-related quality of life index using single nucleotide polymorphisms as instruments for body mass index.

Frontal EEG correlation based human emotion identification and classification.

Humans express their feelings and intentions of their actions or communication through emotions. Recent advancements in technology involve machines in human communication in day-to-day life. Thus, understanding of human emotions by machines will be very helpful in assisting the user in a far better way. Various physiological and non-physiological signals can be used to make the machines to recognize the emotion of a person. The identification of emotional content in the signals is crucial to understand emotion and the machines act with emotional intelligence at appropriate times, thus providing a better human machine interaction with emotion identification system and mental health monitoring for psychiatric patients. This work includes the creation of an emotion EEG dataset, the development of an algorithm for identifying the emotion elicitation segments in the EEG signal, and the classification of emotions from EEG signals. The EEG signals are divided into 3s segments, and the segments with emotional content are selected based on the decrease in correlation between the frontal electrodes. The selected segments are validated with the facial expressions of the subjects in the appropriate time segments of the face video. EEGNet is used to classify the emotion from the EEG signal. The classification accuracy with the selected emotional EEG segments is higher compared to the accuracy using all the EEG segments. In subject-specific classification, an average accuracy of 80.87% is obtained from the network trained with selected EEG segments, and 70.5% is obtained from training with all EEG segments. In subject-independent classification, the accuracy of classification is 67% and 63.8% with and without segment selection, respectively. The proposed method of selection of EEG segments is validated using the DEAP dataset, and classification accuracies and F1-scores of subject dependent and subject-independent methods are presented.

AI tool for predicting MGMT methylation in glioblastoma for clinical decision support in resource limited settings.

Glioblastoma is an aggressive brain cancer with a poor prognosis. The O6-methylguanine-DNA methyltransferase (MGMT) gene methylation status is crucial for treatment stratification, yet economic constraints often limit access. This study aims to develop an artificial intelligence (AI) framework for predicting MGMT methylation. Diagnostic magnetic resonance (MR) images in public repositories were used for training. The algorithm created was validated in data from a single institution. All images were segmented according to widely used guidelines for radiotherapy planning and combined with clinical evaluations from neuroradiology experts. Radiomic features and clinical impressions were extracted, tabulated, and used for modeling. Feature selection methods were used to identify relevant phenotypes. A total of 100 patients were used for training and 46 for validation. A total of 343 features were extracted. Eight feature selection methods produced seven independent predictive frameworks. The top-performing ML model was a model post-Least Absolute Shrinkage and Selection Operator (LASSO) feature selection reaching accuracy (ACC) of 0.82, an area under the curve (AUC) of 0.81, a recall of 0.75, and a precision of 0.75. This study demonstrates that integrating clinical and radiotherapy-derived AI-driven phenotypes can predict MGMT methylation. The framework addresses constraints that limit molecular diagnosis access.

Computer-aided diagnosis for China-Japan Friendship Hospital classification of necrotic femurs using statistical shape and appearance model based on CT scans.

The purpose of this study is to quantify the three-dimensional (3D) structural morphology, bone mineral density (BMD) distribution, and mechanical properties of different China-Japan Friendship Hospital (CJFH) classification types and assist clinicians in classifying necrotic femurs accurately. In this study, 41 cases were classified as types L2 and L3 based on CT images. Then, 3D Statistical Shape and Appearance Models (SSM and SAM) were established, and 80 principal component (PC) modes were extracted from the SSM and SAM as the candidate features. The bone strength of each case was also calculated as the candidate feature using finite element analysis (FEA). Support vector machine (SVM) and Extreme Gradient Boosting (XGBoost) were used to establish 10 machine learning models. Feature selection methods were used to screen the candidate features. The performance of each model was evaluated based on sensitivity, specificity, accuracy, and the area under the receiver operating characteristic (ROC) curve. This resulted in a SVM model for CJFH classification with the performance: accuracy of 87.5%, sensitivity of 85.0%, specificity of 76.0%, and AUC of 94.2%. This study provided effective machine learning models for assisting in diagnosing CJFH types, increasing the objectivity of the diagnosis. They may have great potential for application in clinical assessments of CJFH classification.

Novel statistically equivalent signature-based hybrid feature selection and ensemble deep learning LSTM and GRU for chronic kidney disease classification

Chronic kidney disease (CKD) involves numerous variables, but only a few significantly impact the classification task. The statistically equivalent signature (SES) method, inspired by constraint-based learning of Bayesian networks, is employed to identify essential features in CKD. Unlike conventional feature selection methods, which typically focus on a single set of features with the highest predictive potential, the SES method can identify multiple predictive feature subsets with similar performance. However, most feature selection (FS) classifiers perform suboptimally with strongly correlated data. The FS approach faces challenges in identifying crucial features and selecting the most effective classifier, particularly in high-dimensional data. This study proposes using the Least Absolute Shrinkage and Selection Operator (LASSO) in conjunction with the SES method for feature selection in CKD identification. Following this, an ensemble deep-learning model combining long short-term memory (LSTM) and gated recurrent unit (GRU) networks is proposed for CKD classification. The features selected by the hybrid feature selection method are fed into the ensemble deep-learning model. The model’s performance is evaluated using accuracy, precision, recall, and F1 score metrics. The experimental results are compared with individual classifiers, including decision tree (DT), Random Forest (RF), logistic regression (LR), and support vector machine (SVM). The findings indicate a 2% improvement in classification accuracy when using the proposed hybrid feature selection method combined with the LSTM and GRU ensemble deep-learning model. Further analysis reveals that certain features, such as HEMO, POT, bacteria, and coronary artery disease, contribute minimally to the classification task. Future research could explore additional feature selection methods, including dynamic feature selection that adapts to evolving datasets and incorporates clinical knowledge to enhance CKD classification accuracy further.

Hyperspectral imaging in neurosurgery: a review of systems, computational methods, and clinical applications.

Accurate identification between pathologic (e.g., tumors) and healthy brain tissue is a critical need in neurosurgery. However, conventional surgical adjuncts have significant limitations toward achieving this goal (e.g., image guidance based on pre-operative imaging becomes inaccurate up to 3cm as surgery proceeds). Hyperspectral imaging (HSI) has emerged as a potential powerful surgical adjunct to enable surgeons to accurately distinguish pathologic from normal tissues. We review HSI techniques in neurosurgery; categorize, explain, and summarize their technical and clinical details; and present some promising directions for future work. We performed a literature search on HSI methods in neurosurgery focusing on their hardware and implementation details; classification, estimation, and band selection methods; publicly available labeled and unlabeled data; image processing and augmented reality visualization systems; and clinical study conclusions. We present a detailed review of HSI results in neurosurgery with a discussion of over 25 imaging systems, 45 clinical studies, and 60 computational methods. We first provide a short overview of HSI and the main branches of neurosurgery. Then, we describe in detail the imaging systems, computational methods, and clinical results for HSI using reflectance or fluorescence. Clinical implementations of HSI yield promising results in estimating perfusion and mapping brain function, classifying tumors and healthy tissues (e.g., in fluorescence-guided tumor surgery, detecting infiltrating margins not visible with conventional systems), and detecting epileptogenic regions. Finally, we discuss the advantages and disadvantages of HSI approaches and interesting research directions as a means to encourage future development. We describe a number of HSI applications across every major branch of neurosurgery. We believe these results demonstrate the potential of HSI as a powerful neurosurgical adjunct as more work continues to enable rapid acquisition with smaller footprints, greater spectral and spatial resolutions, and improved detection.

Comparison of automatic and physiologically-based feature selection methods for classifying physiological stress using heart rate and pulse rate variability indices.

This study evaluates the effectiveness of four machine Learning algorithms in classifying physiological stress using Heart Rate Variability (HRV) and Pulse Rate Variability (PRV) time series, comparing an automatic feature selection based on Akaike's criterion to a physiologically-based feature selection approach. Linear Discriminant Analysis, Support Vector Machines, K-Nearest Neighbors and Random Forest were applied on ten HRV and PRV indices from time, frequency and information domains, selected with the two feature selection approaches. Data were collected from 127 healthy individuals during different stress conditions (rest, postural and mental stress). Our results highlight that, while specific stress classification is feasible, distinguishing between postural and mental stress remains challenging. The used classifiers exhibited similar performance, with automatic Akaike Information Criterion-based feature selection proving overall better than the physiology-driven approach. Additionally, PRV-based features performed comparably to HRV-based ones, indicating their potential in outpatient monitoring using wearable devices. The obtained findings help to determine the most relevant HRV/PRV features for stress classification, potentially useful to highlight different physiological mechanisms involved during both challenges accompanied by a shift in the sympathovagal balance. The proposed approach may have implications for advancing stress assessment methodologies in clinical settings and real-world contexts for well-being evaluation.

Multi-Frequency Microwave Sensing System with Frequency Selection Method for Pulverized Coal Concentration

The accurate measurement of pulverized coal concentration (PCC) is crucial for optimizing the production efficiency and safety of coal-fired power plants. Traditional microwave attenuation methods typically rely on a single frequency for analysis while neglecting valuable information in the frequency domain, making them susceptible to the varying sensitivity of the signal at different frequencies. To address this issue, we proposed an innovative frequency selection method based on principal component analysis (PCA) and orthogonal matching pursuit (OMP) algorithms and implemented a multi-frequency microwave sensing system for PCC measurement. This method transcended the constraints of single-frequency analysis by employing a developed hardware system to control multiple working frequencies and signal paths. It measured insertion loss data across the sensor cross-section at various frequencies and utilized PCA to reduce the dimensionality of high-dimensional full-path insertion loss data. Subsequently, the OMP algorithm was applied to select the optimal frequency signal combination based on the contribution rates of the eigenvectors, enhancing the measurement accuracy through multi-dimensional fusion. The experimental results demonstrated that the multi-frequency microwave sensing system effectively extracted features from the high-dimensional PCC samples and selected the optimal frequency combination. Filed experiments conducted on five coal mills showed that, within a common PCC range of 0–0.5 kg/kg, the system achieved a minimum mean absolute error (MAE) of 1.41% and a correlation coefficient of 0.85. These results indicate that the system could quantitatively predict PCC and promptly detect PCC fluctuations, highlighting its immediacy and reliability.

Abstract A031: Harnessing the potential of circulating tumour cells for precision diagnostics via multiplexed imaging of the levels and subcellular localizations of over 50 cell identity, state and signaling markers per cell

Abstract Due to their longitudinal accessibility through liquid biopsy, circulating tumour cells (CTCs) hold huge potential as sources of molecular information capable of underpinning precision diagnostics in cancer. Yet key methodological limitations have thus far constrained the practical utility of CTCs as diagnostic analytes, including: a) reliance on positive CTC selection strategies that can bias against distinctive CTC subpopulations (e.g. low EpCAM, low size, low density), and; b) standard fluorescence imaging methods that capture only 4-6 molecular markers per cell. Since 3-4 markers are required to identify CTCs with even moderate confidence, such low marker plexity acutely restricts derivation of additional molecular insights about the cellular states and molecular signals that may be driving disease. Yet these insights are essential to guide selection of optimal therapies, to adapt therapeutic strategies as cycles of resistance arise, and even to stratify patients to the trials needed to expand the therapeutic arsenal. To overcome these challenges and harness the potential of CTCs for precision diagnostics, we have developed a comprehensive pipeline for CTC isolation, storage and batch processing via multiplexed immunofluorescence imaging of 50+ molecular markers per cell. These markers illuminate CTC identity, state (epithelial vs mesenchymal vs stemness), fate (proliferation, death, senescence) and signalling (spanning ∼10 alternate ‘driver’ signalling pathways), providing truly unprecedented molecular insights per CTC, across heterogeneous CTC populations, and regarding potential therapeutic targets. Downstream single-cell quantitative image analyses enable robust but adaptable computational parsing of CTC identity, removing false-positive and false-negative instances otherwise resulting from standard 4-plex CTC definitions (e.g. DAPI, CD45, EpCAM, pan-Cytokeratin) and complementing our upstream use of negative selection methods that capture the full, unbiased diversity of CTCs. The remaining 40+ markers facilitate integrated analyses of relationships between CTC state, fate and signalling pathways, capturing not only protein and phospho-protein expression levels per cell, but also variations in subcellular localisation that constitute additional layers of functional regulation not captured by most omics methods. Excitingly, when combined with machine learning, our approach can discern therapy- resistant cell subpopulations with over 98% accuracy in models of prostate cancer therapy resistance. We are now assessing CTC diversity across patients ranging from treatment naïve to advanced castrate-resistance prostate cancers. Overall, our unique high-plexity analysis now enables interrogation of detailed states, signals and dependencies in each patient CTC, providing the foundations for next-generation precision diagnostics to continuously match individual patients to optimal therapies at each stage of their disease journey. We believe this marks a significant step towards harnessing the true potential of CTCs for precision diagnostics. Citation Format: John G Lock, Tim J Mann, Ye Zheng, Tanzila Khan, Daniel Neumann, Alexander James, Therese Becker, Tara Roberts. Harnessing the potential of circulating tumour cells for precision diagnostics via multiplexed imaging of the levels and subcellular localizations of over 50 cell identity, state and signaling markers per cell [abstract]. In: Proceedings of the AACR Special Conference: Liquid Biopsy: From Discovery to Clinical Implementation; 2024 Nov 13-16; San Diego, CA. Philadelphia (PA): AACR; Clin Cancer Res 2024;30(21_Suppl):Abstract nr A031.

A knowledge empowered graph learning feature selection method based on variation propagation effect representation and analysis for human-centric manufacturing systems

As the construction goals of manufacturing systems shift from Industry 4.0 to Industry 5.0, the development goals of manufacturing systems have also shifted from technology driven to human-centric. Feature Selection (FS) of manufacturing systems plays an important role in helping human control and upgrade manufacturing system quality. However, due to the propagation of variations in manufacturing systems, traditional FS methods cannot accurately select the key features that have an important disturbance to quality indicator. In this paper, a process knowledge-enabled FS method is proposed to obtain key features of quality indictor (QI) that would cause bias of prediction model accuracy. Firstly, a process representation learning algorithm embedded in the process knowledge graph is proposed, which represents the manufacturing variation propagation process during the manufacturing process. Secondly, a feature importance evaluation algorithm based on disturbance intensity judgment rules is proposed to evaluate the importance of process features. Finally, the top k important features are selected as key features based on feature importance ranking. Experimental results demonstrate the proposed method outperforms state-of-art and classic methods in four evaluated indicators. Moreover, the four indicators of MSE, MAE, RMSE, and R 2 have respectively increased by 18%, 16%, 18%, and 33% with 7 features compared to the cutting-edge method.

New winter common wheat variety ‘Saban’ for the middle Volga Region

Winter wheat in the Republic of Tatarstan is sown annually on an area of more than 300 K hectares. The purpose of the current work was to develop a new variety ‘Saban’ and characterize its ability to produce high yields and grain quality in the northern regions of the Middle Volga region. The study was conducted on the fields of the Tatarsky RIA, SSU of the FRC KazRC of RAS in 2020–2022. Seeds were laid in ‘black’ fallow at the optimal time. The variety ‘Saban’ was developed by the method of individual selection from a hybrid population obtained from crossing the varieties ‘Kazanskaya 285’ and ‘Bezenchukskaya 380’. On average, over three years of testing, winter resistance was 88 %, and the plant height was 74 cm, which is 9.7 cm lower than that of the standard variety ‘Kazanskaya 560’. Lodging resistance was 8.7 points with a coefficient of variation of 6.66 %. The variety ‘Saban’ is of the intensive type, responsive to the application of complex fertilizers. The variety was better than the standard variety ‘Kazanskaya 560’ in productivity by 0.64 t/ha. Under arid conditions of 2021 the variety yielded 4.20 t/ha, which was 0.65 t/ha more than the standard variety did. This result was due to the productive stem density and a large number of grains per ear. The variety produced heavy kernels, its nature weight was 770–802 g/l. Crude protein percentage in grain ranged from 13.2 % to 15.2 %, and gluten varied from 27.0 % to 29.7 %. The variety formed high indicators of rheological qualities, such as 301 u.a. of flour strength, and 59 % of valorimetric estimation. The general baking assessment for three years of study was 4.5 points. The variety can be recommended for cultivation in the Middle Volga region of the Russian Federation from 2024.