Mangrove ecosystems are some of the most productive and important sinks for sediment globally. Recently, there has been an increasing interest in possible causes of stress in mangroves, such as nutrient limitation, high salinity, solar radiation and temperature. We measured different factors casing stress and determined how they influenced oxidative stress and growth biomarkers in six study sites dominated by mangroves; Al Lith, South Jeddah, Dahban, Thuwal, Rabigh and Mastorah. Significant differences (P < 0.05) were recorded in water salinities and temperatures, nitrogen and phosphorus content in sediments, and antioxidant enzyme activities in different study sites. The highest salinity (40.75 ‰) and temperature (29.32°C) were recorded in the Rabigh mangrove stand, which corresponds to the lowest dissolved oxygen (5.21 mg/L). Total organic carbon, total nitrogen and total phosphorus in sediment across the study areas were in the order Rabigh>Thuwal>Dahban>Al Lith>South Jeddah>Mastorah. Total nitrogen in mangrove leaves at Rabigh was the highest and about 1.3 times higher than the total nitrogen in South Jeddah mangrove ecosystem, very different from the ratio of total nitrogen in the sediments at Rabigh and South Jeddah mangrove ecosystems. The average values of δ13C (-17.60‰) and δ15N (2.84‰) in the six mangrove ecosystems, and the highest δ13C (-13.62‰) and δ15N (4.39‰) at Rabigh in the sediments suggest that nutrient input differed among study sites. Higher nutrient levels at Rabigh mangrove ecosystem were attributed to restricted circulation, camel grazing and land runoff with agricultural waste during seasonal flooding events. However, N limitation and possibly salinity contributed to stress in Al Lith, South Jeddah, Dahban, Thuwal, Rabigh, and Mastorah mangrove ecosystems. Salinity (r = 0.9012) contribute more to stress at Rabigh.