Sediment Samples Research Articles

River Sedimentation Due to Tin Mining Activities in Bangka Island

Sedimentation in rivers is a major issue of environmental damage in the Kepulauan Bangka Belitung Province. In the last two decades, since tin mining was carried out by the community, massive sedimentation has occurred in the river. The purpose of the study is to investigate the characteristics of sediment materials and the effects of illegal tin mining on river sedimentation on Bangka Island. Sediment characteristics can be seen from the distribution of grain size and specific gravity of the bed sediment material and the concentration of suspended sediments seen from their position along the river. Sediment grain size is classified according to the American Geophysical Union. A total of 45 sediment samples spread across 12 rivers in the district capital area on Bangka Island were collected at the end of the rainy season in 2023, and 4 more samples were added in the dry season of 2023 in the Muntok River. The MPM formula was applied to estimate bedload transport and statistical methods were used to estimate suspended sediment rates. Additionally, the sedimentation rates are estimated based on dependable continuous flow with a probability exceeding 50% (Q50%). The study’s findings indicate that Illegal tin mining in Bangka Island has a major impact on river sedimentation. The particle size distribution of bed material sediments does not align with what is typically found in nature, which often exhibits coarser particles upstream and finer downstream. Similarly, in areas downstream of tin mining operations, the concentration of suspended particles increases significantly, up to 12 times higher than natural conditions.

Assessing Trace Metal Contamination and Associated Risks in the Kossan River Ecosystem, Southern Côte d'Ivoire

Trace metals accumulate in aquatic systems and can pose a threat to human health and wildlife. In recent decades, human activity has become the main source of metals in the environment. In order to gain a better understanding of metal contamination in Ivorian rivers impacted by human activity, and to help set up a database, we studied the distribution of arsenics (As), cadmium (Cd), copper (Cu), lead (Pb) and zinc (Zn) in the Kossan River. A total of 21 surface water and sediment samples were taken at 7 stations along the River Kossan between March 2019 and July 2020. Total concentrations of the metals were analyzed by atomic absorption spectroscopy (AAS). Carcinogenic and non-carcinogenic risks were assessed in surface water. Contamination indices such as EF, CF; Igeo and PLI were calculated to determine the level of sediment contamination. Ecological risk indices Er and RI were used to assess the potential risks associated with metals. The concentrations of As, Pb, Cd, Cu and Zn found in surface water samples fell within the following ranges: 2.03 - 17.19, 1.752 - 13.264, 0.067 - 0.774, 17.44 - 2369.11 and 136.72 - 3669.37 µg/L, respectively and in sediment: 0.69 - 4.60, 2.10 - 11.30, 0.13 - 5.00, 1.70 - 28.20 and 4.10 - 90.30 µg/g, respectively. The results showed high levels of As, Cu, Pb and Zn contamination in places, above WHO limits. The calculation of non-carcinogenic and carcinogenic risk indices revealed that arsenic and copper can present major health risks for humans through the consumption of water. Cd concentrations exceeded geochemical background values. The results suggest moderate to very severe Cd contamination of the sediments by anthropogenic origin at certain sampling points. In general, the results of the ecological risk indices revealed low to moderate levels of contamination for metals, with the exception of heavy cadmium contamination in the river. The highest concentrations of trace metals were observed in water and sediment samples collected from stations with high anthropogenic pressure. The continuing intensification of human activity may in the long term present a major risk to man and his environment, hence the need to set up a system for monitoring river watercourses and to develop a system for remediating trace metals in river water such as phytoremediation.

Dioxin-like and estrogenic activity screening in fractionated sediments from a German catchment after the 2021 extreme flood

BackgroundThe flood in July 2021 is considered one of the largest flood disasters in Western Europe in decades, with massive socio-economic consequences. The potential emission and remobilization of anthropogenic pollutants can lead to additional environmental consequences, which need to be addressed in long-term mitigation strategies. The Inde River and its tributary, the Vichtbach River, form a catchment located at the transition from the low mountain ranges of the Eifel to the lowlands of the Lower Rhine Embayment in Germany. The area has been an industrial and mining hotspot for centuries, making it a high-risk area for flood sediment pollution. The present study provides an ecotoxicological screening of flood sediments of the Vicht–Inde catchment to gain an impression of the degree of contamination by organic pollutants by means of in vitro effect-based method. Sediment samples were collected within days after the flood and fractionated prior to biotesting, and supportive instrumental geochemical analysis was performed.ResultsFlood sediments did not reveal estrogenic potential, which was included in the testing strategy as a relevant endpoint for industrial chemicals and untreated wastewater. In contrast, moderate-to-high dioxin-like activity was observed in 70% of the sediment samples with a peak dioxin-like potential at the restored section of the Inde. Overall, four hotspot samples were identified as at risk, which aligned mostly with the high concentration of organic pollutants including PAHs and PCBs. The fractionation allowed the identification of PAHs and their derivates as the most likely toxicity drivers for dioxin-like activity in the sediments of the Vicht–Inde catchment.ConclusionThe results provide first information on the prioritization of hotspot locations at risk for a detailed ecotoxicological profiling and a post-flood monitoring of organic contamination. The identified sinks of contamination in the floodplain areas can be considered a source for remobilization of pollution in future flood events, which is highly relevant for the receiving Rur River.

Organochlorine pesticides and polychlorinated biphenyls in sediments of the Lanzhou reach of Yellow River (China): Spatial distribution, sources and risk assessment

Knowledge about sediment levels and sources of persistent organic pollutants (POPs) in Lanzhou section Yellow River remains limited. Organochlorine pesticides (OCPs) and polychlorinated biphenyls (PCBs) levels in 12 sediment samples from this region were measured by GC/MS. OCPs concentrations ranged from 85.6 to 202 ng/g, while PCBs levels varied between 3.08 and 32.3 ng/g. Our findings demonstrated a significant correlation between these pollutants and total organic matter (TOC), highlighting TOC's role in pollutants distribution. Notably, OCPs and PCBs levels were higher in the eastern section, following the water flow direction. The primary OCPs components were hexachlorocyclohexane (HCH) and dichlorodiphenyltrichloroethane (DDT), whereas PCBs were dominated by perchlorinated compound. Source identification indicated that OCPs primarily originated from historical residues and recent applications, while industrial activities as significant PCBs sources. Sediment quality guidelines and health risk assessments indicated negligible environmental risk. This study providing valuable insights on sediment pollution control and management strategies.

Identification of Pops Organic Compounds in Sediment in the Cisangkuy Watershed Using GC-MS Analysis Method

The Cisangkuy Watershed is a tributary of the Upper Citarum River located in the Bandung Basin, West Java. Based one previous research, one organic pollution in the Cisangkuy Watershed is the presence of POPs (Persistent Organic Pollutants) compounds. POPs are organic compounds that can last a very long time in the environment (persistent) and have toxic properties for organisms. This study aims to identify and analyse the organic content of POPs and sediments in the Cisangkuy Watershed, as well as to analyse the source of pollutants and categorise them based on the Stockholm Convention on Persistent Organic Pollutants. Identification of POPs compounds using gas chromatography-mass spectrometry (GC-MS) technique. Sediment sampling was conducted by grab sampling that involved 20 sampling points from upstream to downstream of the Cisangkuy Watershed (CS-1 to CS-20). Samples were collected from 9 sub-districts. The research location shows that the land activities at the sampling point include asphalt hot mix, pharmaceutical, textile, and manufacturing industries. The results showed the presence of 1,2-Benzenedicarboxylic acid, mono (2-ethylhexyl) ester, 4,8,12-Tetradecatrienenitrile, 5,9,13-trimethyl-, and 2-Hexyl-1-octanol compounds at sampling points from upstream to downstream. These compounds were derived from chemical industry effluents, fossil fuel combustion, and agricultural activities. The compounds are classified as ‘industrial waste’ and ‘industrial waste with antibiotic properties’ by the Stockholm Convention on Organic Waste Management.

Interplay of natural and anthropogenic factors in sediment dynamics and trace element distribution in Güllük Gulf, western Türkiye: A comprehensive geochemical and hydrodynamic analysis

Güllük Gulf, located in the southeastern Aegean Sea, is significantly impacted by diverse human activities, including urban development, tourism, and intensive aquaculture. This study aims to assess the spatial distribution of trace metals in the Gulf's sediments, identify their sources, and evaluate their environmental impacts to inform effective management strategies. It also examines sediment transport patterns, which are crucial in influencing the distribution and concentration of pollutants. Establishing background concentration levels for various elements provides a baseline to assess pollution levels and identify deviations due to anthropogenic impact. Sediment samples were collected from 45 stations and analyzed for grain size, organic carbon, carbonate content, and concentrations of 26 elements. Contamination was assessed using indices such as Enrichment Factor (EF), Geoaccumulation Index (Igeo), Contamination Factor (Cf), Degree of Contamination (Cdeg), Pollution Load Index (PLI), Modified Pollution Index (MPI), and Toxic Risk Index (TRI). Statistical analyses, including Principal Component Analysis (PCA) and Cluster Analysis (CA), were used to identify pollution sources. Results indicated that Güllük Gulf's sediments are predominantly sandy, with significant silt and clay fractions in sheltered bays. Organic carbon content averaged 1.68%, with higher values near urban and aquaculture areas. Trace metal concentrations exhibited notable spatial variability, with elevated levels of Pb, Cu and Zn in specific areas, indicating both natural and anthropogenic sources. PCA identified five significant factors contributing to metal presence, linking them to lithogenic origins, aquaculture activities, and industrial inputs. TRI results showed moderate toxic risk in Asin Bay, primarily due to Ni, As and Cr. The sediment transport model of Güllük Gulf, crucial in understanding regional pollution dynamics, revealed a complex interplay of hydrodynamic forces. The study underscores the significant environmental impact of human activities on sediment quality in Güllük Gulf. Elevated trace metal levels near aquaculture sites emphasize the need for stringent environmental management practices. Effective strategies should include regular monitoring, sustainable aquaculture practices, and stakeholder engagement to mitigate environmental impacts and preserve the Gulf's ecological integrity. This comprehensive approach provides crucial insights for future research and environmental management policies aimed at addressing the complex challenges facing Güllük Gulf.

Detangling past and modern zinc anthropogenic source contributions in an urbanized coastal river by combining elemental, isotope and speciation approaches

The accumulation of trace metals in the environmental compartments of coastal rivers is a global and complex environmental issue, requiring multiple tools to constrain the various anthropogenic sources and biogeochemical processes affecting the water quality of these environments. The Valao fluvio-estuarine system (Rio de Janeiro, Brazil) presents a challenging case of a coastal river contaminated by both modern and historical anthropogenic metal sources, located in the land and in the intra-estuary, continuously mixed by tidal cycles. This study employed a combination of spatial distribution analysis of trace metals including gadolinium (Gd), zinc (Zn) isotopic analyses, and X-ray absorption spectroscopy (XAS) to distinguish between these sources. The concentrations of metals in both dissolved (water samples) and surficial sediment compartments (Suspended Particulate Matter and sediment samples) display an overall enrichment trend from upstream to downstream. Multivariate statistical analysis allows to discriminate geogenic elements derived from watershed geology (Ti, K, and Mg) vs anthropogenic contaminants from urban runoff and domestic sewage discharges (Cu, Cr, Pb, Zn, and Gd); and legacy metal contaminants (Zn and Cd) remobilized from ancient metallurgical wastes and transported upstream in the estuary during tidal cycles. The anthropogenic Gd concentration in the dissolved compartment increases along the watercourse, highlighting continuous ongoing sewage discharge. Zinc solid speciation also indicates that Zn contribution from legacy metallurgy waste is primarily associated with sulfide-Zn and Zn-phyllosilicate in the outlet estuary, while in upstream sediments of fluvio-estuarine system, Zn is found bound to organic matter. Zinc isotope systematically reveals a progressive downstream shift to heavier isotope compositions. Upstream, the relatively pristine site and the urbanized section of the river exhibit a relatively uniform δ66/64Zn value (+0.20 ± 0.07 ‰) in suspended particulate matter (SPM) and surficial sediments. These results indicate that domestic sewage discharges contribute to Zn enrichment in sediments of the Valao fluvio-estuarine system but without modifying its isotope signature in sediments. The sediment of the downstream estuarine section shows a heavier δ66/64Zn value (+0.48 ± 0.08 ‰), indicating the strong influence of the intra-estuarine source identified as the historical metallurgic contamination. An integrated view of the geochemical tracers allows thus inferring that the untreated sewage and legacy metallurgical contamination are the primary sources of anthropogenic Zn contamination. It highlights the progressive mixing along the estuarine gradient under tidal dynamics. The influence of the former source continuously expands from the headland towards the estuary.

Green and sensitive method combining ultrasonic solvent extraction, stir bar sorptive extraction and thermal desorption-gas chromatography–tandem mass spectrometry for determination of organotin compounds in sediment

A method integrating ultrasonic solvent extraction (USE) and stir bar sorptive extraction (SBSE) with thermal desorption-gas chromatography–tandem mass spectrometry (TD-GC–MS/MS) was developed and validated for determining critical organotin compounds (OTCs)—tributyltin (TBT) and triphenyltin (TPhT)—in sediment. In preparing a 0.5 g sediment sample, two 1-min cycles of US bath solvent extraction (using equal parts CH3COOH and MeOH), were followed by derivatization with NaBEt4 in the presence of a methanolic-aqueous solution of CH3COONa and SBSE for 1 h, achieving analyte recoveries of 64–94 %. Matrix-matched internal standard calibration and the use of an isotopically labelled recovery standard corrected for analyte losses and matrix effect (ME), ensuring accurate results for triorganotins. However, the method was not suitable for mono- and diorganotins due to low and anomalous recoveries caused by ME. Miniaturizing and optimizing the sample preparation reduced chemicals use and waste, contributing to the method being deemed ’an excellent green analysis’ by the Analytical Eco-Scale assessment. The method achieved a limit of quantification (LOQ) of 0.081 ng g−1 and an expanded uncertainty (U) value of 15 % for TBT, meeting the environmental quality standards (EQS) criteria of the European Union Water Framework Directive. Its applicability was demonstrated through the analysis of actual sediment samples and natural matrix certified reference materials.

Potential use of gammarus (Pontogammarus maeoticus) and shrimp (Palaemon elegans) as biomonitors of microplastics pollution in coastal environments

Microplastics (MPs) pose a significant threat to marine ecosystems, necessitating robust biomonitoring to assess aquatic risks and inform effective policymaking. In this study we investigated MPs pollution in gammarus (Pontogammarus maeoticus), shrimp (Palaemon elegans), sediment and water samples of southern coast of the Caspian Sea to assess the potential use of these two crustaceans as biomonitors of MPs pollution, bioconcentration of MPs in organisms’ tissue and the pollution risks of MPs in environmental matrices. Samples were collected from 6 stations during June to August 2023. MPs were found in all compartments with an average of 100 ± 45.34 items/kg dry weight, 0.45 ± 0.06 items/L, 0.38 ± 0.21 items/individual or 0.58 ± 0.34 items/g wet weight (ww) and 0.26 ± 0.15 items/individual or 8.69 ± 7.88 items/g ww, for sediments, seawaters, P. elegans and P. maeoticus, respectively. MPs were prevailed by class 300−1000 μm in size, polyamide in polymer, fiber in shape and black in color. P. maeoticus and P. elegans did not meet the selection criteria as MPs biomonitors. However, bioconcentration factor (BCF) illustrated that both crustaceans can absorb and accumulate MPs from their surrounding water (BCF >1). Based on contamination factors (CF) values, sampling stations were polluted with MPs (1 ≤ CF < 6). The overall pollution load index (PLI) for sediment and seawater stations were 2.47 and 1.88, respectively, indicating minor contamination with MPs in the risk level I. Current research provides useful information on MPs pollution in crustaceans species and the risk level of MPs in environmental matrices that can be suitable for bioaccumulation hazard assessment and future monitoring programs.

Resting Cysts of the Toxic Dinoflagellate Gymnodinium catenatum (Dinophyceae) Ubiquitously Distribute along the Entire Coast of China, with Higher Abundance in Bloom-Prone Areas

Blooms of Gymnodinium catenatum have occurred occasionally in different areas of China and caused tremendous economic loss and even threatened human health. Not only is G. catenatum an important harmful-algal-bloom (HAB)-causing species, but also the only gymnodinioid dinoflagellate known to produce paralytic shellfish poisoning toxins (PSTs). Due to the germination of resting cysts, which often initiates blooms, the distribution and abundance of cysts in sediments and particularly the confirmation of cyst beds are important information for understanding and predicting dinoflagellate blooms. In this research, 199 sediment samples were collected from China’s coastal seas, ranging from the Beidaihe in the Bohai Sea (BS) to the southernmost sample from the Nansha Islands of the South China Sea (SCS). TaqMan quantitative PCR (qPCR) assays with species-specific primers and probes were developed to specifically detect the distribution and abundance of cysts in the 199 samples. The detection revealed that G. catenatum cysts were widely present in the sediments (126 of the 199 samples), with 93.55%, 74.65%, 42.37%, and 50% of the samples detected positively from the BS, YS, ECS and SCS, respectively, and covering the vast sea area from Nansha Islands to the Beidaihe area. The single-cyst morpho-molecular identification in the samples from Beidaihe confirmed the existence of G. catenatum cysts in the BS, and the positive detections of G. catenatum cysts using the qPCR methods. While G. catenatum cysts were widely distributed in all four seas of China, the average abundance was relatively low (1.0 cyst per gram of wet sediment). Three samples from the East China Sea (ECS), however, contained G. catenatum cysts at a relatively higher level (23 cysts g−1 wet sediment) than other sea areas, suggesting a pertinence of cyst abundance to the frequent occurrences of G. catenatum blooms in the area during recent years. Collectively, for G. catenatum being such an important toxic and HAB-causing species globally, the ubiquitous distribution of its cysts along the coastal waters of China and higher abundance in the bloom-prone areas warns us of a risk that cyst beds, although currently low in abundance, may seed HABs in any and many sea areas of China at any forthcoming year, and particularly those areas with records of frequent HABs outbreaks in the past.

Diversity of Clostridioides difficile PCR ribotypes isolated from freshwater sediments depends on the isolation method.

Clostridioides difficile is an intestinal pathogen of humans and animals. In community-associated infections, the environment is suggested to play a significant role in overall transmission routes. Although the prevalence of C. difficile in freshwater and soil has been widely studied, little is known about its presence in sediments. In this study, we tested 15 sediment samples collected from various freshwater sources. C. difficile was isolated from all sampled sites, yielding a total of 171 strains grouped into 26 ribotypes, with 001/072 and 014/020 being the most prevalent. Genome sequencing of 37 isolates from 17 PCR ribotypes confirmed the presence of highly related strains in the geographically distant and unlinked water samples. Eight divergent PCR ribotypes from clades C-II and C-III were found in six samples. In each sample, the unbound fraction (supernatant after sediment wash) and bound fraction (sonicated sediment sample) were subjected to enrichment. Sonication was only slightly better than washing in terms of sample positivity (14 positive samples with sonication and 11 with washing). However, sonication substantially increased the diversity of the PCR ribotypes obtained (23 in sonicated samples vs nine in washed samples). In conclusion, sediments are a rich source for investigating the diversity of environmental C. difficile, including isolates from divergent lineages. Selection of the isolation method can significantly impact the diversity of captured PCR ribotypes.IMPORTANCEClostridioides difficile, a pathogenic bacterium that can cause intestinal infections in humans and animals, thrives in the gut but also disperses widely through spores found in the environment. Clinical and environmental strains often overlap with common PCR ribotypes, which are consistently isolated worldwide. Environmental studies have mostly focused on water and soil, but sediments have been very poorly studied. In this study, we investigated the presence of C. difficile in various freshwater sediments and evaluated the effectiveness of two different isolation approaches on positivity rates and strain diversity. C. difficile was found to be highly prevalent in sediments, with an isolation rate of 100%. Sonication proved to be more effective than simple washing for capturing a greater diversity of PCR ribotypes. Overall, this study underscores the widespread presence of C. difficile in freshwater sediments and emphasizes the importance of continued surveillance and monitoring to understand its ecology and transmission dynamics.

Unpuzzling spatio-vertical and multi-media patterns of aniline accelerators/antioxidants in an urban estuary

Aniline accelerators and antioxidants (AAs) are high-production-volume industrial additives that have recently attracted emerging concern given their ubiquity in environmental compartments and the associated (eco)toxic effects. Nonetheless, available information on the multi-media behavior of AAs and their transformation products (TPs) remains scarce. Therefore, we determined the residues of twenty-four AA(TP)s in paired dissolved phases (i.e., filtered water), suspended particulate matter (SPM), and sediment samples collected from the Yangtze River Estuary (YRE), a highly urbanized estuary in the East China. The median total concentrations of targeted compounds were 0.73 ng/g dw, 34.4 ng/L, and 39.6 ng/L in sediments, surface and bottom water, respectively. Diphenylamine (DPA) was the most abundant congener in SPM, while 1,3-diphenylguanidine (DPG) and dicyclohexylamine (DChA) dominated in the dissolved phases and sediments. Various anthropogenic emissions and (a)biotic degradation may collectively shape the matrix-specific accumulation patterns and spatial trends of these compounds across the YRE. However, the vertical patterns of AA(TP)s were obscure, probably due to the estuarine hydrodynamics and/or the modest sample size. The SPM fractions of AA(TP)s in water (Ф: 7.9–100%) and the sediment sorption coefficients (KOC: 0.01–6.56) both positively correlated with their hydrophobicity as indicated by the octanol-water partition coefficient (KOW). Moreover, risk quotients implied moderate to high aquatic toxicity posed by several AA(TP)s at certain YRE sites. The estimated total annual fluxes of our analytes transported via water and sediments towards the East China Sea were 5.90–365.5 tons and 4.23–1,100 kg, respectively. This work provides a systematic investigation of multi-media processes and ecological risks of AA(TP)s in a highly-urbanized estuary, contributing to holistic comprehension of these emerging contaminants in estuarine environments.

Yunchengibacter salinarum gen. nov., sp. nov., a novel bacterium of the family Kordiimonadaceae isolated from sediment in Yuncheng salt lake.

A Gram-stain-negative, aerobic, motile and rod-shaped bacterium, the color of the bacterial colony ranges from light yellow to yellow, designated YC-2023-2T, was isolated from sediment sample of Yuncheng salt lake. Growth occurred at 15-45℃ (optimum 37℃), pH 6.0-9.0 (optimum pH 7.0-8.0) and with 0-8.0% NaCl (w/v, optimum 2.0%). The phylogenetic analysis based on 16S rRNA gene sequences showed that strain YC-2023-2T belonged to the family Kordiimonadaceae. The closely related members were Gimibacter soli 6D33T (92.38%), Kordiimonas lipolytica M41T (91.88%), Eilatimonas milleporae DSM 25217T (91.88%) and Kordiimonas gwangyangensis JCM 12864T (91.84%). The genome of strain YC-2023-2T was 2957513 bp, and the genomic DNA G+C content was 63.91%. The main respiratory quinone was Q-10 and the major fatty acids (>10%) were iso-C15:0, C16:0, C19:0 cyclo ω8c, Summed Feature 8 (C18:1 ω6c or C18:1 ω7c) and Summed Feature 9 (iso-C17:1 ω9c or C16:0 10-methyl). The major polar lipids consisted of phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol, unidentified glycolipid, unidentified lipid, and two unidentified aminolipids. Based on the phylogenetic, phenotypic and chemotaxonomic characteristics, strain YC-2023-2T is proposed to represent a novel species of a novel genus named Yunchengibacter salinarum gen. nov., sp. nov., within the family Kordiimonadaceae. The type strain is YC-2023-2T (= GDMCC 1.4502T = KCTC 8546T).

Antibiotic residues in the cirata reservoir, Indonesia and their effect on ecology and the selection for antibiotic-resistant bacteria

Antibiotic residues, their mixture toxicity, and the potential selection for antibiotic-resistant bacteria could pose a problem for water use and the ecosystem of reservoirs. This study aims to provide a comprehensive understanding of the occurrence, concentration, distribution, and ecological risks associated with various antibiotics in the Cirata reservoir, Indonesia. In our water and sediment samples, we detected 24 out of the 65 antibiotic residues analyzed, revealing a diverse range of antibiotic classes present. Notably, sulphonamides, diaminopyrimidine, and lincosamides were frequently found in the water, while the sediment predominantly contained tetracyclines and fluoroquinolones. Most antibiotic classes reached their highest concentrations in the water during the dry season. However, fluoroquinolones and tetracyclines showed their highest concentrations in the water during the wet season. Ecotoxicological risk assessments indicated that the impact of most antibiotic residues on aquatic organisms was negligible, except for fluoroquinolones. Looking at the impact on cyanobacteria, however, varying risks were indicated, ranging from medium to critical, with antibiotics like sulfamethoxazole, ciprofloxacin, norfloxacin, and lincomycin posing substantial threats. Among these, ciprofloxacin emerged as the antibiotic with the strongest risk. Furthermore, fluoroquinolones may have the potential to contribute to the selection of antibiotic-resistant bacteria. The presence of mixtures of antibiotic residues during the wet season significantly impacted species loss, with Potentially Affected Fraction of Species (msPAF) values exceeding 0.75 in almost 90% of locations. However, the impact of mixtures of antibiotic residues in sediment remained consistently low across all locations and seasons. Based on their occurrences and associated risks, 12 priority antibiotic residues were identified for monitoring in the reservoir and its tributaries. Moreover, the study suggests that river inflow serves as the most significant source of antibiotic residues in the reservoir. Further investigations into the relative share attribution of antibiotic sources in the reservoir is recommended to help identify effective interventions.

Geographic distribution of modern dinoflagellate cysts in surface sediments of the Arabian Sea: significance of taxa and morphometry as potential ecological indicators.

Studies on dinoflagellate cysts in the Arabian Sea (AS) are limited to the coastal waters, but no information from the deeper depths. The dinoflagellate cyst assemblages in surface sediment samples (0-2cm) from the deeper depths (up to ~ 4500m) of central (oxygen minimum zone (OMZ)) and southeastern (oligotrophic) AS revealed that the relatively good numbers of cyst concentrations reach deeper depths of OMZ (3505m) and oligotrophic (4368m) regions, but the former harbored more cyst concentrations than the latter. The cyst concentration and species count (including HAB species) recorded here are lower compared to the eastern (EAS) and western (WAS) AS, but the autotrophic cyst dominance (74-83%) at deeper depths is in contrast with the heterotrophic dominance in coastal AS. Of the recorded 41 cyst species (belonging to 18 genera), four species (cyst of Cladopyxis sp., Operculodinium janduchenei, Stelladinium bifurcatum, and Protoperidinium monospinum) from the deepest part of oligotrophic AS form the first report. In contrast, Spiniferites and Lingulodinium cysts were common occurrences. Taxonomic comparison with literature revealed (i) the prevalence of more cosmopolitan species (32 species) which could be due to the prevalence of large and small-scale lateral transport of cysts in oligotrophic regions followed by OMZ and coastal regions, respectively, and (ii) very few region-specific species, i.e., cyst of Protoperidinium latissimum, Lejeunecysta sabrina, cyst of Protoperidinium denticulatum in EAS and Impagidinium patulum, and I. strialatum, in WAS. Interestingly, variability in the morphometry was evident between the coastal and open oceans in some cosmopolitan cysts, e.g., Operculodinium centrocarpum and Lingulodinium machaerophorum. These findings from the less studied pelagic regions will contribute to the growing knowledge of dinoflagellate cyst distribution patterns and highlight the significance of cyst taxa and morphology as potential ecological indicators for AS.

Determination of microplastics in sediment, water, and fish across the Orange-Senqu River basin

Microplastics are increasingly recognised as posing a significant environmental threat across systems. Their pervasive presence in freshwater poses a serious concern, given the heavy reliance of both humans and biodiversity on healthy, functioning freshwater ecosystems. Acknowledgment of the potential risks led the transboundary Orange-Senqu River Commission (ORASECOM) to include sampling for microlitter (primarily microplastics) in riverine sediment, surface water, and fishes, across Southern Africa as part of the third Joint Basin Survey (JBS3) in 2021. The aim was to establish a first, basin-wide estimate of microlitter contamination across compartments, setting a baseline for further monitoring. The survey showed that the abundance of microlitter in riverine sediment (0 – 4000 particles.kg-1 dry weight (dw)) and riverine water (1.00 ± 0.71 – 69.75 ± 68.55 SD items.L-1) varied considerably between sample sites, with no correlation between the two. The abundance of microlitter in fishes was low (average of 0.7 ± 0.4 items.individual-1). Course resolution analyses suggested that microlitter concentrations in riverine sediment and riverine water at each site did not correlate with land use directly upstream, though variation in microlitter abundance did isolate some hotspots of contamination. Discharge data collected from nine gauging stations near sampling sites confirmed that low flows prevailed in the system during the study, with high flows occurring approximately 5 months prior during the summer months. There is some variation in river flow across the catchment which is a likely driver of microlitter transport. This was evident in the polymer composition for sediment and water samples. Based on the average discharge at each gauging station and microlitter concentrations measured in riverine water, the estimated microlitter load ranged from ∼889 particles.s-1 to ∼17.9 million particles.s-1, with a substantial amount ending likely up in the mudbelt adjacent to the Orange River mouth. This assessment provides a first insight into the characterisation and distribution of microlitter in multiple compartments across the Orange-Senqu River basin. Overall, the findings highlight the need for continued monitoring across compartments at catchment scales to improve our understanding of microplastic pathways into and within riverine systems.

The evolution and relationship of the Yellow Sea warm current and the Yellow Sea Cold Water Mass since the Mid-Holocene and possible ENSO influences

The Yellow Sea Warm Current (YSWC) and Yellow Sea Cold Water Mass (YSCWM) are crucial components of Yellow Sea oceanic dynamics. Investigating their historical relationships since the mid-Holocene, as demonstrated by modern observations, is highly important. We reconstructed their evolution using 37 surface sediment samples and core Z1 from the Yellow Sea. Basic end-member analysis of core sediment grain sizes revealed that end-member two had a dominant peak at 12 μm, indicating the evolution of the YSWC. The analysis of the structure of benthic foraminiferal communities in surface sediments indicated that the combination of Ammonia ketienziensis, Hanzawaia nipponica, and Astrononion italicum serves as a reliable indicator of the evolution of the YSCWM. By integrating sedimentological and micro-palaeontological evidence with published organic geochemical findings, we elucidated high-resolution evolutionary records of the YSWC and YSCWM since the mid-Holocene. Our findings indicate that the YSWC underwent rapid intensification with significant fluctuations during ∼6.0–3.9 ka. It then decreased to modern levels between ∼3.9 ka and ∼1.9 ka, remaining relatively stable during ∼1.9–0.0 ka, with enhancements noted at ∼1.4 ka and ∼0.3 ka. The YSCWM evolved synchronously with the YSWC after ∼6.0 ka, weakened and then strengthened during ∼6.0–1.9 ka, and maintained relative stability during ∼1.9–0.0 ka, with decreases observed at ∼1.4 ka and ∼0.3 ka. The YSWC and YSCWM exhibited opposite changes, similar to modern oceanographic patterns, except for synchronous variations during ∼4.0–3.9 ka, when the YSCWM was formally established. The decoupling of the YSCWM and the YSWC during ∼4.0–3.9 ka and the significant enhancements of the YSCWM at ∼2.5 ka and ∼2.0 ka when the YSWC slightly weakened are associated with the substantial influence of the ENSO climate phenomena on the coastal regions of East Asia from ∼4.0 ka to ∼1.9 ka. We propose that the YSCWM is more sensitive to ENSO, potentially making it more suitable for reconstructing the palaeoceanography and palaeoclimatology of the Yellow Sea.

Microbial dynamics, chemical profile, and bioactive potential of diverse Egyptian marine environments from archaeological wood to soda lake

Halophilic archaea are a unique group of microorganisms that thrive in high–salt environments, exhibiting remarkable adaptations to survive extreme conditions. Archaeological wood and El–Hamra Lake serve as a substrate for a diverse range of microorganisms, including archaea, although the exact role of archaea in archaeological wood biodeterioration remains unclear. The morphological and chemical characterizations of archaeological wood were evaluated using FTIR, SEM, and EDX. The degradation of polysaccharides was identified in Fourier transform infrared analysis (FTIR). The degradation of wood was observed through scanning electron microscopy (SEM). The energy dispersive X–ray spectroscopy (EDX) revealed the inclusion of minerals, such as calcium, silicon, iron, and sulfur, into archaeological wood structure during burial and subsequent interaction with the surrounding environment. Archaea may also be associated with detected silica in archaeological wood since several organosilicon compounds have been found in the crude extracts of archaeal cells. Archaeal species were isolated from water and sediment samples from various sites in El–Hamra Lake and identified as Natronococcus sp. strain WNHS2, Natrialba hulunbeirensisstrain WNHS14, Natrialba chahannaoensis strain WNHS9, and Natronococcus occultus strain WNHS5. Additionally, three archaeal isolates were obtained from archaeological wood samples and identified as Natrialba chahannaoensisstrain W15, Natrialba chahannaoensisstrain W22, and Natrialba chahannaoensisstrain W24. These archaeal isolates exhibited haloalkaliphilic characteristics since they could thrive in environments with high salinity and alkalinity. Crude extracts of archaeal cells were analyzed for the organic compounds using gas chromatography–mass spectrometry (GC–MS). A total of 59 compounds were identified, including free saturated and unsaturated fatty acids, saturated fatty acid esters, ethyl and methyl esters of unsaturated fatty acids, glycerides, phthalic acid esters, organosiloxane, terpene, alkane, alcohol, ketone, aldehyde, ester, ether, and aromatic compounds. Several organic compounds exhibited promising biological activities. FTIR spectroscopy revealed the presence of various functional groups, such as hydroxyl, carboxylate, siloxane, trimethylsilyl, and long acyl chains in the archaeal extracts. Furthermore, the archaeal extracts exhibited antioxidant effects. This study demonstrates the potential of archaeal extracts as a valuable source of bioactive compounds with pharmaceutical and biomedical applications.

Eco-toxic Risk Assessment of microplastics in water and sediment across Nigeria Offshore, Gulf of Guinea.

Globally, the environmental impacts of microplastics (MPs) as emerging pollutants have drawn a lot of attention. This study aimed to assess the distribution and associated potential ecotoxic risk of MPs in the water and sediment of Nigeria's offshore waters. Water and sediment samples were collected from sixteen (16) stations in October 2023 and analysed using Attenuated Total Reflectance-Fourier Transform Infrared (ATR-FTIR) spectroscopy and stereomicroscopy. For physical characterization, the composition of MPs in sediment and water was 73 particles/kg and 48 particles/L, respectively, while the ATR-FTIR composition at the Eastern Zone (EZ) was 705 particles/L and 1033 particles/kg, the Central Zone (CZ) was 212 particles/L and 338 particles/kg, and the Western Zone (WZ) was 223 particles/L and 218 particles/kg. The identified MPs shapes were filaments, plastic films, fibre, and microbeads. Polychloroprene (CR) (18.10% and 16.86%) at EZ and CZ and polyvinyl alcohol (PVA) (20.64%) at WZ were most abundant in sediment, respectively. In comparison, PVA (22.3%, 22.2%, and 21.08%) was most abundant across EZ, CZ, and WZ in water. The polymer-based plastic contamination factors (ppCf) and pollution load index (pPLI) showed low contamination and pollution load, and the polymer risk index (pRi) showed medium and low risk in water and sediment, respectively. The polymer ecological risks index (pERI) showed a high-risk level (pERI: 1,001-10,000) in water and sediment across the EZ, CZ, and WZ of the Nigerian offshore waters. In marine environments, an extensive environmental monitoring program and trend forecasting for microplastics are crucial. This study will provide theoretical and technical support for developing efficient legislation or policy on the prevention and control of plastic pollution.

Year-round monitoring of antibiotic-resistant bacteria in pristine uppermost stream and estimation of pollution sources

Studies on the conditions and pollution routes of antibiotic-resistant bacteria (ARB) in rivers can help provide countermeasures against the spread of ARB. This study focused on the pristine uppermost stream of a river, where Escherichia coli (E. coli) and enterococci were detected, although the stream flows through a pristine forest catchment. Antibiotic resistance of E. coli and enterococci isolated from the river water, riverbed sediment, and feces of waterside animals, such as birds and Mustelidae, were investigated throughout the year in the pristine uppermost sites. Antibiotic resistance was present in 1.4% (7/494) of the E. coli strains and 3.0% (24/812) of the enterococcal strains, and was low throughout the year. Although antibiotic resistance of bacteria isolated from feces was not detected in this watershed, the prevalence of multidrug-resistant E. coli was 0.4% (1/246) and 0.6% (1/172) in river water and riverbed sediment samples, respectively were observed. The presence of extended-spectrum β-lactamase (ESBL)-producing E. coli was confirmed in river water samples, and genomic analysis revealed that the samples possessed the CTX-M-15 group. Multidrug-resistant strains and ESBL-producing strains were classified as phylogroups B1 and A, respectively, which are E. coli phenotypes isolated from wild animals. Pulsed-field gel electrophoresis revealed analysis targeting enterococci that strains isolated from river water and bird feces were in the same cluster with 100% similarity. Therefore, bird feces are a source of enterococci in the uppermost stream of the river. Because multidrug-resistant bacteria and ESBL-producing bacteria were present in the pristine uppermost stream of the pristine river, urgent elucidation of the spreading routes of ARB is important.