Sediment Particulate Organic Carbon Research Articles

Particulate organic carbon sedimentation triggers lagged methane emissions in a eutrophic reservoir

AbstractReservoirs act as carbon sinks when sedimentation of particulate organic carbon (POC) exceeds CO2 and CH4 emissions. Here, we study the poorly explored process where phytoplankton‐derived acidic polysaccharides (APs) aggregate into particulate organic matter, promoting carbon export to sediments. This source of POC in sediments can mineralize to CO2 and CH4 over various timescales. Our research, centered on a Mediterranean reservoir, elucidates phenological trends of APs and POC sedimentation and identifies their predominant drivers. Our findings present synchronic sedimentation patterns of POC and APs but identify a 2‐week delay between POC sedimentation and CH4 emissions. Despite its eutrophic status, our data demonstrate this reservoir's role as a carbon sink, sequestering 4.33 g C m−2 yr−1. This highlights the need to consider various time scales when quantifying carbon budgets in reservoirs.

Effect of Particulate Organic Carbon Deposition on Nitrate Reduction in the Hyporheic Zone

AbstractThe hyporheic zone (HZ), where surface water and groundwater interact in sediments beneath streams, presents unique conditions for nutrient dynamics, such as carbon and nitrogen (N) cycling. Organic carbon (OC) in aquatic systems has two distinct forms: dissolved organic carbon and particulate organic carbon (POC). OC affects N reduction and controls the occurrence of denitrification, a primary process by which nitrate (NO3−) is removed as gas (N2 or N2O) to the atmosphere. When POC is the predominant form of OC in streams, how POC influences NO3− reduction within a HZ remains unclear. We established a new reactive transport model incorporating POC transport and filtration processes to assess how POC deposition affects NO3− removal. Sediment permeability decreases as POC is filtrated in the streambed. Nitrate influx is reduced due to POC‐induced sediment clogging. The deposited POC in the shallow streambed serves as an OC source and supports higher biogeochemical reaction kinetics because OC is an important substrate promoting microbial activities. The filtrated POC pool enhances denitrification, thus causing a higher NO3− removal efficiency. In contrast, the POC pool is typically assumed to be distributed homogeneously in sediments, potentially causing a significant underestimation of stream‐borne NO3− removal. A lower hydraulic conductivity, a smaller POC grain size, and a larger POC filtration efficiency and in‐stream POC concentration allow for extensive POC deposition within the shallow streambed that favors nitrate removal. This study provides a better understanding of N processing and an accurate estimation of NO3− removal potential in HZs.

Terrigenous organic carbon drives methane dynamics in cascade reservoirs in the upper Yangtze China

Methane (CH4) emissions from freshwaters to the atmosphere have a profound impact on global atmospheric greenhouse gas (GHG) concentrations. Anthropogenic footprints such as dam construction and reservoir operation significantly changed the fate and transport of CH4 in freshwaters. The source of particulate organic carbon (POC) in reservoirs is a critical factor controlling CH4 production and emissions. However, little is known of how reservoir operation mediates the transport of POC and regulates CH4 accumulation in cascade hydroelectric reservoirs. Here, spatial and temporal variations in POC and CH4 were explored in the Xiluodu (XLD) and Xiangjiaba (XJB) reservoirs which are deep valley cascade reservoirs located in the main channel of the upper Yangtze River. Based on the δ13C-POC and N/C mole ratio of particulate organic matter, the results of multi-endmember stable isotope mixing models by a Bayesian model showed that terrigenous POC and autochthonous POC accounted for approximately 55% ± 18% and 43% ± 19% (SD, n = 179) of POC, respectively. Together with other hydrological and environmental parameters, we found that the input of terrigenous POC was dominantly influenced by water level variations and flow regulation due to reservoir operation. The cumulative effect of POC caused by cascade dams was not apparent. Terrigenous POC were more likely to drive CH4 accumulation in our study. Evident low level of CH4 in both reservoirs were likely affected by low sedimentation of POC and microbial CH4 oxidation. We hope our study could provide a conceptual framework for further modeling of CH4 dynamics in cascade reservoirs.

Modelling seabed sediment physical properties and organic matter content in the Firth of Clyde

Abstract. High-quality quantitative maps of seabed sedimentary physical and geochemical properties have numerous research and conservation applications, including habitat and ecosystem modelling, marine spatial planning, and ecosystem service mapping. However, such maps are lacking for many ecologically and economically important marine areas. Using legacy data supplemented by measurements from recent benthic surveys, modelled hydrodynamic variables, and high-resolution bathymetry, quantitative maps for the top 10 cm of seabed sediment were generated via a combination of statistical and machine-learning techniques for the Firth of Clyde, a semi-enclosed coastal sea on the west coast of Scotland. The maps include sediment fractions of mud, sand, and gravel; whole-sediment median grain size; sediment permeability and porosity; rates of natural seabed abrasion; and sediment particulate organic carbon and nitrogen content. Properties were mapped over an unstructured grid so that very high resolutions were achieved close to the coastlines, where sediments may be expected to be spatially heterogeneous. Overall, the maps reveal extensive areas of very low sediment permeability coupled with low rates of natural seabed disturbance. Moreover, muddy sediments in the inner Firth of Clyde, Inchmarnock Water, and the sea lochs are enriched in organic carbon and nitrogen relative to the sediments of the outer Firth of Clyde. As a demonstration of the value of these maps, the standing stock of organic carbon and nitrogen in the surficial sediments of the Clyde was calculated. The Clyde stores 3.42 and 0.33 million t of organic carbon and nitrogen in the top 10 cm of seabed sediment, respectively, substantially contributing to Scotland's coastal and shelf blue carbon stocks. Data products are available from https://doi.org/10.15129/2003faa2-ee93-4c11-bb16-48485f5f136d (Heath and Pace, 2021).

Particulate organic carbon dynamics in the Gulf of Lion shelf (NW Mediterranean) using a coupled hydrodynamic–biogeochemical model

Abstract. The Gulf of Lion shelf (GoL, NW Mediterranean) is one of the most productive areas in the Mediterranean Sea. A 3D coupled hydrodynamic–biogeochemical model is used to study the mechanisms that drive the particulate organic carbon (POC) dynamics over the shelf. A set of observations, including temporal series from a coastal station, remote sensing of surface chlorophyll a, and a glider deployment, is used to validate the distribution of physical and biogeochemical variables from the model. The model reproduces the time and spatial evolution of temperature, chlorophyll a, and nitrate concentrations well and shows a clear annual cycle of gross primary production and respiration. We estimate an annual net primary production of ∼ 200 × 104 t C yr−1 at the scale of the shelf. The primary production is marked by a coast-slope increase with maximal values in the eastern region. Our results show that the primary production is favoured by the inputs of nutrients imported from offshore waters, representing 3 and 15 times the inputs of the Rhône in terms of nitrate and phosphate. In addition, the empirical orthogonal function (EOF) decomposition highlights the role of solar radiation anomalies and continental winds that favour upwellings, and inputs of the Rhône River, in annual changes in the net primary production. Annual POC deposition (27 × 104 t C yr−1) represents 13 % of the net primary production. The delivery of terrestrial POC favours the deposition in front of the Rhône mouth, and the mean cyclonic circulation increases the deposition between 30 and 50 m depth from the Rhône prodelta to the west. Mechanisms responsible for POC export (24 × 104 t C yr−1) to the open sea are discussed. The export off the shelf in the western part, from the Cap de Creus to the Lacaze-Duthiers canyon, represents 37 % of the total POC export. Maximum values are obtained during shelf dense water cascading events and marine winds. Considering surface waters only, the POC is mainly exported in the eastern part of the shelf through shelf waters and Rhône inputs, which spread to the Northern Current during favourable continental wind conditions. The GoL shelf appears as an autotrophic ecosystem with a positive net ecosystem production and as a source of POC for the adjacent NW Mediterranean basin. The undergoing and future increase in temperature and stratification induced by climate change could impact the trophic status of the GoL shelf and the carbon export towards the deep basin. It is crucial to develop models to predict and assess these future evolutions.

A study on the response of carbon cycle system in the Pearl River Estuary to riverine input variations

Abstract Human activities associated with estuaries have already affected estuarine carbon cycles and flows. Especially with rapid development and urbanization, widespread wastewater treatment plants in watersheds have altered the amounts and proportions of riverine nutrients and organic carbon, which has strongly impacted carbon dynamics and budgets in coastal oceans. In this study, a well-validated carbon cycle model was used to reveal the response of carbon dynamics to reasonable estimated disturbance to riverine inputs (i.e., nutrients, dissolved organic carbon (DOC) and particulate organic carbon (POC)) in the Pearl River Estuary (PRE). Scenario results demonstrate the distinct response patterns and spatial variability of carbon dynamics. Specifically, with phytoplankton blooms and biological production closely linked to riverine nutrients, riverine nutrient alterations mainly impact photosynthesis in the PRE, especially in the lower part of the PRE. As DOC fuels bacterial respiration in the water column, heterotrophic respiration is particularly sensitive to riverine DOC disturbances. POC not only relates to light penetration in turbid estuarine waters, which impacts photosynthesis, but also undergoes deposition, which affects the biochemical reactions in the sediment. Thus, perturbations to riverine POC input led to significant changes in both biological production and sediment dissolved inorganic carbon (DIC) release. Multiple linear regression results reveal that both net community production and sediment DIC release flux modulate the variations of air-sea CO2 flux in the PRE, which highlights the roles of terrestrial POC input and deposition in a shallow estuary. When delivered into the PRE, a high proportion of POC tends to be deposited and contribute to sediment DIC release or carbon sequestration, while a significant fraction of riverine DOC is transported offshore to shelf regions. This study underscores the impacts of intensive human activities on carbon cycle system in coastal oceans and the importance of terrestrial organic carbon reduction and nutrient control in upstream basins.

Modeling Hydrologic Controls on Particulate Organic Carbon Contributions to Beach Aquifer Biogeochemical Reactivity

AbstractThe intertidal zone of beach aquifers hosts biogeochemical transformations of terrestrially derived nutrients that are mediated by reactive organic carbon from seawater infiltration. While dissolved organic carbon is often assumed the sole reactive organic carbon component, advected and entrapped particulate organic carbon (POC) is also capable of supporting chemical reactions. Retarded advection of POC relative to groundwater flow forms pools of reactive carbon within beach sediments that support biogeochemical reactions as dissolved solutes move across them due to transient groundwater flow. In this work, we simulate the contribution of POC to beach reactions and identify parameters that control its relative contribution using a groundwater flow model (SEAWAT) and reactive transport model (PHT3D). Results show transient contributions of POC to denitrification, as the spatial extent of the saline circulation cell varies over time due to changing hydrologic factors. A decrease in POC retardation and an increase in tidal amplitude during POC deposition resulted in POC expansion, which increased the relative contributions of POC to beach reactivity. Decreased hydraulic conductivity and increased tidal amplitude post‐deposition decreased the utilization of POC for denitrification by allowing the oxic, saline water to completely encompass the pool of POC. Results highlight that POC is an intermittently utilized source of carbon that displays complex spatial relationships with groundwater flow conditions and overall beach biogeochemistry. This work demonstrates that POC may be a periodically important but overlooked contributor to biogeochemical reactions in carbon‐poor beach aquifers.

Reconstructing organic matter sources and rain rates in the southern West Pacific Warm Pool during the transition from the deglaciation period to early Holocene

Transient features in the organic carbon content of deep-sea sediment cores resulting from changes in the flux and/or quality of sedimentary organic matter are not uncommon. We examined the geochemical characteristics of sediments retrieved with a gravity corer from the northwestern Solomon Sea (3908 m water depth), southern West Pacific Warm Pool (WPWP). δ13C and δ15N of sedimentary organic matter, together with TOC/TN data suggest that the organic material is characterized by a mixture of marine and terrestrial origins with a higher contribution from marine algae. The data were analyzed with an inverse non-steady-state reaction-transport model to examine the variability and magnitude of particulate organic carbon (POC) flux to the seafloor during the transition between the deglaciation period and early Holocene. Measured POC content and porewater NO3−, NH4+, DIC and SO42− concentrations were used to constrain the model. Hindcast results revealed that POC flux decreased from 75 to 37.5 μg cm−2 yr−1 during the deglaciation–early Holocene transition. The rate of POC degradation in the present setting is slightly lower compared to that in the pre-Holocene setting. The synchronous decline in the relative contribution of terrestrial organic matter input and rapid sea level rise during this transition suggest that sea level, rather than surface productivity, is the dominant factor controlling the POC deposition flux in the Solomon Sea. This is conceivable because the sampling site is proximal to high-relief islands with high rainfall, a well-developed submarine canyon system and narrow and steep continental margins. Consequently, we suggest that deep-water basins in proximity to similar high-relief mountainous islands in the tropical Pacific may represent important sinks for terrestrial organic material, especially during sea level lowstands.

Connected macroalgal‐sediment systems: blue carbon and food webs in the deep coastal ocean

AbstractMacroalgae drive the largest CO2 flux fixed globally by marine macrophytes. Most of the resulting biomass is exported through the coastal ocean as detritus and yet almost no field measurements have verified its potential net sequestration in marine sediments. This gap limits the scope for the inclusion of macroalgae within blue carbon schemes that support ocean carbon sequestration globally, and the understanding of the role their carbon plays within distal food webs. Here, we pursued three lines of evidence (eDNA sequencing, Bayesian Stable Isotope Mixing Modeling, and benthic‐pelagic process measurements) to generate needed, novel data addressing this gap. To this end, a 13‐month study was undertaken at a deep coastal sedimentary site in the English Channel, and the surrounding shoreline of Plymouth, UK. The eDNA sequencing indicated that detritus from most macroalgae in surrounding shores occurs within deep, coastal sediments, with detritus supply reflecting the seasonal ecology of individual species. Bayesian stable isotope mixing modeling [C and N] highlighted its vital role in supporting the deep coastal benthic food web (22–36% of diets), especially when other resources are seasonally low. The magnitude of detritus uptake within the food web and sediments varies seasonally, with an average net sedimentary organic macroalgal carbon sequestration of 8.75 g C·m−2·yr−1. The average net sequestration of particulate organic carbon in sediments is 58.74 g C·m−2·yr−1, the two rates corresponding to 4–5% and 26–37% of those associated with mangroves, salt marshes, and seagrass beds, systems more readily identified as blue carbon habitats. These novel data provide important first estimates that help to contextualize the importance of macroalgal‐sedimentary connectivity for deep coastal food webs, and measured fluxes help constrain its role within global blue carbon that can support policy development. At a time when climate change mitigation is at the foreground of environmental policy development, embracing the full potential of the ocean in supporting climate regulation via CO2 sequestration is a necessity.

Aragonite dissolution kinetics and calcite/aragonite ratios in sinking and suspended particles in the North Pacific

The lack of consensus on CaCO3 dissolution rates and calcite to aragonite production and export ratios in the ocean poses a significant barrier for the construction of global carbon budgets. We present here a comparison of aragonite dissolution rates measured in the lab vs. in situ along a transect between Hawaii and Alaska using a 13C labeling technique. Our results show a general agreement of aragonite dissolution rates in the lab versus in the field, and demonstrate that aragonite, like calcite, shows a non-linear response of dissolution rate as a function of saturation state (Ω). Total carbon fluxes along the N. Pacific transect in August 2017, as determined using sediment traps, account for 11∼23 weight % of total mass fluxes in the upper 200 m, with a PIC (particulate inorganic carbon) /POC (particulate organic carbon) mole ratio of 0.2∼0.6. A comparison of fluxes at depths of 100 m and 200 m indicates that 30∼60% PIC dissolves between these depths with 20∼70% attenuation in POC fluxes. The molar ratio of PIC to POC loss is 0.29. The simultaneous loss of PIC and POC in the upper 200 m potentially indicates PIC dissolution driven by organic matter respiration, or metazoan/zooplankton consumption. The calcite/aragonite ratio in trap material is significantly lower in the subtropical gyre than in the subarctic gyre. Aragonite fluxes vary from 0.07 to 0.38 mmolm−2day−1 at 100 m, and 0.06 to 0.24 mmolm−2day−1 at 200 m along the North Pacific transect, with no specific trend over latitude. The identification of suspended PIC mineral phases by Raman spectroscopy shows the presence of aragonite below 3000 m in the subtropical gyre, but none in the subpolar gyre. These multiple lines of evidence suggest that predictions based on a strictly thermodynamic view of aragonite dissolution, combined with measured aragonite fluxes, underestimate observed alkalinity excess and measured PIC attenuation in sinking particles. Our measured aragonite flux combined with our inorganic dissolution rate only account for 9% and 0.2% of the excess alkalinity observed in the North Pacific (Feely et al., 2004), assuming aragonite sinking rates of 1 mday−1 and 100 mday−1, respectively. However, respiration-driven dissolution or metazoan/zooplankton consumption, indicated by the simultaneous attenuation of PIC and POC in sediment traps, is able to generate the magnitude of dissolution suggested by observed excess alkalinity.

Biomass of plankton and macrobenthos and benthic species diversity in relation to environmental gradients in a nationwide coastal survey

Using Korean coastal survey data, we examined the relationships between plankton and benthic biomass and environmental parameters. The nitrate in coastal waters was mainly derived from the influx of fresh water, whereas much of the ammonium originated from decomposing organic matter in the sediments and river discharge. Phytoplankton and zooplankton concentrations were positively related to the amount of suspended particulate matter (SPM), but decline when SPM becomes high (> 10 ppm). Particulate organic carbon (POC) comprised about 40% of the SPM, suggesting that organic matters associated with river-borne sediments and re-suspended particles are a large source of coastal water POC. Zooplankton abundance was more closely related to the distribution of phytoplankton than to that of POC. Benthic biomass showed a dome-shaped relationship with the water column POC concentration, but no clear relationship with sediment POC distribution. The biodiversity of macrobenthic animals gradually decreases when POC exceeds 1% of the sediment weight. Reduction of siltation and POC could lead to enhanced benthic–pelagic coupling via increased plankton biomass and productivity, as well as overall increased benthic diversity in coastal environments.

Organic carbon recycling in Baltic Sea sediments – An integrated estimate on the system scale based on in situ measurements

In situ measured benthic fluxes of dissolved inorganic carbon (DIC), a proxy for organic carbon (OC) oxidation or recycling rates, are used together with burial rates based on measured sediment accumulation rates (SAR) and vertical distribution of OC in the sediment solid phase to construct a benthic OC budget for the Baltic Sea system. The large variability in recycling rates (4.3 ± 0.87–33 ± 17 mmol C m−2 d−1) and burial rates (1.2 ± 0.8–5.9 ± 1.8 mmol C m−2 d−1) between different sub-basins and between different depositional areas within the basins is accounted for in the budget. Our results indicate that sediments in the Baltic Sea have much higher recycling rates and lower burial rates of OC than previously found. The sediment budget calculations show that 22 ± 7.8 Tg C yr−1 of OC is recycled to the water column due to organic matter oxidation, while long term burial amounts to 1.0 ± 0.3 Tg C yr−1. For the Baltic Sea as a whole, 96% of the particulate OC (POC) deposited on the sea floor (23 ± 7.8 Tg C yr−1; the sum of recycling and burial) is recycled back to the water column. However, the burial efficiency (i.e. the fraction buried of the total deposition) shows large variability between the different basins (2.5–16%). The total benthic POC deposition is approximately 20% higher than the estimated POC source originating from primary production in the water column and riverine input. This difference is likely within the uncertainty range of our budget calculations, however it indicates that the POC sources might be underestimated. The results from this study enhance the understanding of OC delivery, deposition and cycling in the Baltic Sea, and help improving existing Baltic OC budgets.

Modelling biogeochemical processes in sediments from the north-western Adriatic Sea: response to enhanced particulate organic carbon fluxes

Abstract. This work presents the result of a study carried out in the north-western Adriatic Sea, by combining two different types of biogeochemical models with field sampling efforts. A longline mussel farm was taken as a local source of perturbation to the natural particulate organic carbon (POC) downward flux. This flux was first quantified by means of a pelagic model of POC deposition coupled to sediment trap data, and its effects on sediment bioirrigation capacity and organic matter (OM) degradation pathways were investigated constraining an early diagenesis model by using original data collected in sediment porewater. The measurements were performed at stations located inside and outside the area affected by mussel farm deposition. Model-predicted POC fluxes showed marked spatial and temporal variability, which was mostly associated with the dynamics of the farming cycle. Sediment trap data at the two sampled stations (inside and outside of the mussel farm) showed average POC background flux of 20.0–24.2 mmol C m−2 d−1. The difference of organic carbon (OC) fluxes between the two stations was in agreement with model results, ranging between 3.3 and 14.2 mmol C m−2 d−1, and was primarily associated with mussel physiological conditions. Although restricted, these changes in POC fluxes induced visible effects on sediment biogeochemistry. Observed oxygen microprofiles presented a 50 % decrease in oxygen penetration depth (from 2.3 to 1.4 mm), accompanied by an increase in the O2 influx at the station below the mussel farm (19–31 versus 10–12 mmol O2 m−2 d−1) characterised by higher POC flux. Dissolved inorganic carbon (DIC) and NH4+ concentrations showed similar behaviour, with a more evident effect of bioirrigation underneath the farm. This was confirmed through constraining the early diagenesis model, of which calibration leads to an estimation of enhanced and shallower bioirrigation underneath the farm: bioirrigation rates of 40 yr−1 and irrigation depth of 15 cm were estimated inside the shellfish deposition footprint versus 20 yr−1 and 20 cm outside. These findings were confirmed by independent data on macrofauna composition collected at the study site. Early diagenesis model results indicated a larger organic matter mineralisation below the mussel farm (11.1 versus 18.7 mmol m−2 d−1), characterised by similar proportions between oxic and anoxic degradation rates at the two stations, with an increase in the absolute values of oxygen consumed by OM degradation and reduced substances re-oxidation underneath the mussel farm.

Combined use of radiocarbon and stable carbon isotope to constrain the sources and cycling of particulate organic carbon in a large freshwater lake, China

The concentrations and isotopic compositions of dissolved inorganic carbon (DIC) and particulate organic carbon (POC) were measured in order to better constrain the sources and cycling of POC in Lake Fuxian, the largest deep freshwater lake in China. Model results based on the combined δ13C and Δ14C, showed that the average lake-wide contributions of autochthonous POC, terrestrial POC, and resuspended sediment POC to the bulk POC in Lake Fuxian were 61%, 22%, and 17%, respectively. This indicated autochthonous POC might play a dominant role in sustaining large oligotrophic lake ecosystem. A mean 17% contribution of resuspended sediment POC to the bulk POC implied that sediment might have more significant influence on aquatic environment and ecosystem than previously recognized in large deep lakes. The contributions of different sources POC to the water-column POC were a function of the initial composition of the source materials, photosynthesis, physical regime of the lake, sediment resuspension, respiration and degradation of organic matter, and were affected indirectly by environmental factors such as light, temperature, DO, wind speed, turbidity, and nutrient concentration.This study is not only the first systematic investigation on the radiocarbon and stable isotope compositions of POC in large deep freshwater lake in China, but also one of the most extensive radiocarbon studies on the ecosystem of any great lakes in the world. The unique data constrain relative influences of autochthonous POC, terrestrial POC, and resuspended sediment POC, and deepen the understanding of the POC cycling in large freshwater lakes. This study is far from comprehensive, but it serves to highlight the potential of combined radiocarbon and stable carbon isotope for constraining the sources and cycling of POC in large lake system. More radiocarbon investigations on the water-column POC and the aquatic food webs are necessary to illuminate further the fate of autochthonous POC, terrestrial POC, and resuspended sediment POC, and their eco-environmental effects.

Modeling studies of dissolved organic matter cycling in Santa Barbara Basin (CA, USA) sediments

Here we describe new reaction-transport models for the cycling of dissolved organic matter (DOM, both dissolved organic carbon [DOC] and dissolved organic nitrogen [DON]) in anoxic marine sediments, and apply these models to data from Santa Barbara Basin sediment cores (maximum depth of 4.6m). Model results show that most organic carbon (and nitrogen) flow in the sediments occurs through reactive DOM intermediates that turn over rapidly to produce inorganic remineralization end-products. Refractory DOM is also produced, and the vast majority of this refractory DOM is not remineralized and either escapes as a benthic flux across the sediment–water interface or is buried. Except near the sediment surface, refractory DOM represents >95% of the total pore water DOM. Pore water DOM appears to be consistently depleted in nitrogen as compared to its source organic matter, which may be the result of differential production of carbon- versus nitrogen-containing refractory DOM during remineralization.Refractory DOC (DOCr) in Santa Barbara Basin sediment pore waters is largely produced from degradation of sediment particulate organic carbon (POC). In addition, there is an upward basal flux of DOCr that is strongly depleted in 14C (−810‰). The Δ14C value of DOCr varies according to its source, ranging from +60‰ (a component of surface sediment POC enriched with radiocarbon from nuclear weapons testing in the 1960’s) to −810‰ (the basal DOC flux). Each contributes to the DOCr benthic flux, which has a weighted-average Δ14C value of −40‰. The model-determined DOCr benthic flux is roughly half of the total DOC benthic flux, consistent with observations in the literature that sediments are a source of both labile and refractory DOC to bottom waters. These results support previous arguments that sediment benthic fluxes represent an important source of refractory DOC to the oceans. The benthic flux of refractory DOC from these sediments may also contribute pre-aged DOC to the water column if the different sub-components of the anoxic pore water DOCr pool with differing radiocarbon ages have differing reactivities in the oxic marine water column.

3-D numerical modelling of methane hydrate accumulations using PetroMod

Within the German gas hydrate initiative SUGAR, a new 2-D/3-D module simulating the biogenic generation of methane from organic matter and the formation of gas hydrates has been developed and included in the petroleum systems modelling software package PetroMod®. Typically, PetroMod® simulates the thermogenic generation of multiple hydrocarbon components (oil and gas), their migration through geological strata, finally predicting oil and gas accumulations in suitable reservoir formations. We have extended PetroMod® to simulate gas hydrate accumulations in marine and permafrost environments by the implementation of algorithms describing (1) the physical, thermodynamic, and kinetic properties of gas hydrates; and (2) a kinetic continuum model for the microbially mediated, low temperature degradation of particulate organic carbon in sediments. Additionally, the temporal and spatial resolutions of PetroMod® were increased in order to simulate processes on time scales of hundreds of years and within decimetres of spatial extension. In order to validate the abilities of the new hydrate module, we present here results of a theoretical layer-cake model. The simulation runs predict the spatial distribution and evolution in time of the gas hydrate stability field, the generation and migration of thermogenic and biogenic methane gas, and its accumulation as gas hydrates.

Decrease in CO2 efflux from northern hardwater lakes with increasing atmospheric warming.

Boreal lakes are biogeochemical hotspots that alter carbon fluxes by sequestering particulate organic carbon in sediments and by oxidizing terrestrial dissolved organic matter to carbon dioxide (CO2) or methane through microbial processes. At present, such dilute lakes release ∼1.4petagrams of carbon annually to the atmosphere, and this carbon efflux may increase in the future in response to elevated temperatures and increased hydrological delivery of mineralizable dissolved organic matter to lakes. Much less is known about the potential effects of climate changes on carbon fluxes from carbonate-rich hardwater and saline lakes that account for about 20 per cent of inland water surface area. Here we show that atmospheric warming may reduce CO2 emissions from hardwater lakes. We analyse decadal records of meteorological variability, CO2 fluxes and water chemistry to investigate the processes affecting variations in pH and carbon exchange in hydrologically diverse lakes of central North America. We find that the lakes have shifted progressively from being substantial CO2 sources in the mid-1990s to sequestering CO2 by 2010, with a steady increase in annual mean pH. We attribute the observed changes in pH and CO2 uptake to an atmospheric-warming-induced decline in ice cover in spring that decreases CO2 accumulation under ice, increases spring and summer pH, and enhances the chemical uptake of CO2 in hardwater lakes. Our study suggests that rising temperatures do not invariably increase CO2 emissions from aquatic ecosystems.

Carbon and biogenic silica export influenced by the Amazon River Plume: Patterns of remineralization in deep-sea sediments

The Amazon River Plume delivers freshwater and nutrients to an otherwise oligotrophic western tropical North Atlantic (WTNA) Ocean. Plume waters create conditions favorable for carbon and nitrogen fixation, and blooms of diatoms and their diazotrophic cyanobacterial symbionts have been credited with significant CO2 uptake from the atmosphere. The fate of the carbon, however, has been measured previously by just a few moored or drifting sediment traps, allowing only speculation about the full extent of the plume's impact on carbon flux to the deep sea. Here, we used surface (0.5m) sediment cores collected throughout the Demerara Slope and Abyssal Plain, at depths ranging from 1800 to 5000m, to document benthic diagenetic processes indicative of carbon flux. Pore waters were extracted from sediments using both mm- and cm-scale extraction techniques. Profiles of nitrate (NO3) and silicate (Si(OH)4) were modeled with a diffusion-reaction equation to determine particulate organic carbon (POC) degradation and biogenic silica (bSi) remineralization rates. Model output was used to determine the spatial patterns of POC and bSi arrival at the sea floor. Our estimates of POC and Si remineralization fluxes ranged from 0.16 to 1.92 and 0.14 to 1.35mmolm−2d−1, respectively. A distinct axis of POC and bSi deposition on the deep sea floor aligned with the NW axis of the plume during peak springtime flood. POC flux showed a gradient along this axis with highest fluxes closest to the river mouth. bSi had a more diffuse zone of deposition and remineralization. The impact of the Amazon plume on benthic fluxes can be detected northward to 10°N and eastward to 47°W, indicating a footprint of nearly 1millionkm2. We estimate that 0.15TmolCy−1 is remineralized in abyssal sediments underlying waters influenced by the Amazon River. This constitutes a relatively high fraction (~7%) of the estimated C export from the region.; the plume thus has a demonstrable impact on Corg export in the western Atlantic. Benthic fluxes under the plume were comparable to and in some cases greater than those observed in the eastern equatorial Atlantic, the southeastern Atlantic, and the Southern Ocean.

Planktonic processes contribute significantly to the organic carbon budget of a coastal fish-culturing area

We assessed the role of planktonic processes, in comparison to allochthonous input from fish cages and sedimentary loss, in the organic carbon (OC) budget of the water column in a semi-enclosed fish-culturing area (culturing red sea bream Pagrus major and yellow tail Seriola quinqueradiata). The sedimentation rate of particulate organic carbon (POC) at the fish-cage sta- tion was an average of 1.5 times that at non-cage stations. There was no significant difference in photosynthesis or respiration rates between fish-cage and non-cage stations. Annual allochtho- nous OC input in the form of leftover feed and fish feces was estimated to be 5 or 10 times that of autochthonous OC input by planktonic photosynthesis. In contrast, POC derived from phytoplank- ton accounted for a significant part (8 to 61%) of total POC sedimentation. As to sinks of OC in the water column, annual planktonic respiration was twice as high as sedimentary loss at the fish- cage station. The plankton community tended to act as a source of OC in spring and summer and as an OC sink in fall and winter. The present study shows that a significant part of allochthonous and autochthonous OC input is respired by plankton and that the remaining OC input is deposited on the seafloor of fish-culturing areas.

Functioning of the planktonic ecosystem on the Gulf of Lions shelf (NW Mediterranean) during spring and its impact on the carbon deposition: a field data and 3-D modelling combined approach

Abstract. A coupled hydrodynamic-biogeochemical modelling is developed to address main mechanisms that drive the particulate organic carbon (POC) deposition in the Gulf of Lions (NW-Mediterranean). Low-salinity water (LSW, salinity <37.5) lenses detached from the Rhone River plume under specific wind conditions tend to favour the biological productivity and provide a good opportunity for validating a planktonic ecosystem modelling. A specific calibration dedicated to river plume ecosystems is then proposed and validated using in situ measurements within such LSW lens (BIOPRHOFI cruise – May 2006) and on the Gulf of Lions. During spring 2006, the POC deposition is maximal on the prodelta area and within the coastal area in the Gulf of Lions. Organic detritus mostly contribute to the total POC deposition (82–92%) whereas the contribution of living organisms (microphytoplankton) appears lower than 17%. Exploring both influences of terrestrial inputs from the Rhone River and planktonic ecosystems on the POC deposition on the shelf, we estimated that the contribution of terrestrial POM inputs to the total POC deposition is lower than 17% at the shelf scale during the study period, with maxima during peak discharges of the Rhone River. The main deposition area of terrestrial POC is found in the vicinity of the river mouth in agreement with sediment data. On the other hand, a remarkable influence of marine biological processes on the POC deposition is highlighted further on the shelf (from 60 to 80 m depth). A tight feedback between zooplankton and POM contents in the water column is proposed to explain the control of POC deposition by zooplankton: terrestrial POM inputs would favour the development of living organisms through photosynthesis and grazing processes increasing the retention of organic matter within the food web. By favouring the development of large-sized zooplankton, LSW lenses may have paradoxically a negative impact on the carbon deposition on the shelf. In the same way, peak discharges of the Rhone River finally increase the gradient of POC deposition between the prodelta and the offshore area in the Gulf of Lions. The biogenic elements from the Rhone River are then exported further offshore through advection of zooplankton communities on the Gulf of Lions shelf.