Sediment Ammonium Research Articles

Combined Gel Probe and Isotope Labeling Technique for Measuring Dissimilatory Nitrate Reduction to Ammonium in Sediments at Millimeter-Level Resolution

Dissimilatory NO(3)(-) reduction in sediments is often measured in bulk incubations that destroy in situ gradients of controlling factors such as sulfide and oxygen. Additionally, the use of unnaturally high NO(3)(-) concentrations yields potential rather than actual activities of dissimilatory NO(3)(-) reduction. We developed a technique to determine the vertical distribution of the net rates of dissimilatory nitrate reduction to ammonium (DNRA) with minimal physical disturbance in intact sediment cores at millimeter-level resolution. This allows DNRA activity to be directly linked to the microenvironmental conditions in the layer of NO(3)(-) consumption. The water column of the sediment core is amended with (15)NO(3)(-) at the in situ (14)NO(3)(-) concentration. A gel probe is deployed in the sediment and is retrieved after complete diffusive equilibration between the gel and the sediment pore water. The gel is then sliced and the NH(4)(+) dissolved in the gel slices is chemically converted by hypobromite to N(2) in reaction vials. The isotopic composition of N(2) is determined by mass spectrometry. We used the combined gel probe and isotopic labeling technique with freshwater and marine sediment cores and with sterile quartz sand with artificial gradients of (15)NH(4)(+). The results were compared to the NH(4)(+) microsensor profiles measured in freshwater sediment and quartz sand and to the N(2)O microsensor profiles measured in acetylene-amended sediments to trace denitrification.

The Effects of Salinity on Nitrogen Losses from an Oligohaline Estuarine Sediment

Benthic respiration, sediment–water nutrient fluxes, denitrification and dissimilatory nitrate reduction to ammonium (DNRA) were measured in the upper section of the Parker River Estuary from 1993 to 2006. This site experiences large changes in salinity over both short and long time scales. Sediment respiration ranged from 6 to 52 mmol m−2 day−1 and was largely controlled by temperature. Nutrient fluxes were dominated by ammonium fluxes, which ranged from a small uptake of −0.3 to an efflux of over 8.2 mmol N m−2 day−1. Ammonium fluxes were most highly correlated with salinity and laboratory experiments demonstrated that ammonium fluxes increased when salinity increased. The seasonal pattern of DNRA closely followed salinity. DNRA rates were extremely low in March, less than 0.1 mmol m−2 day−1, but increased to 2.0 mmol m−2 day−1 in August. In contrast, denitrification rates were inversely related to salinity, ranging from 1 mmol m−2 day−1 during the spring and fall to less than 0.2 mmol m−2 day−1 in late summer. Salinity appears to exert a major control on the nitrogen cycle at this site, and partially decouples sediment ammonium fluxes from organic matter decomposition.

The Effects of Varying Salinity on Ammonium Exchange in Estuarine Sediments of the Parker River, Massachusetts

We examined the effects of seasonal salinity changes on sediment ammonium (NH4+) adsorption and exchange across the sediment–water interface in the Parker River Estuary, by means of seasonal field sampling, laboratory adsorption experiments, and modeling. The fraction of dissolved NH4+ relative to adsorbed NH4+ in oligohaline sediments rose significantly with increased pore water salinity over the season. Laboratory experiments demonstrated that small (∼3) increases in salinity from freshwater conditions had the greatest effect on NH4+ adsorption by reducing the exchangeable pool from 69% to 14% of the total NH4+ in the upper estuary sediments that experience large (0–20) seasonal salinity shifts. NH4+ dynamics did not appear to be significantly affected by salinity in sediments of the lower estuary where salinities under 10 were not measured. We further assessed the importance of salinity-mediated desorption by constructing a simple mechanistic numerical model for pore water chloride and NH4+ diffusion for sediments of the upper estuary. The model predicted pore water salinity and NH4+ profiles that fit measured profiles very well and described a seasonal pattern of NH4+ flux from the sediment that was significantly affected by salinity. The model demonstrated that changes in salinity on several timescales (tidally, seasonally, and annually) can significantly alter the magnitude and timing of NH4+ release from the sediments. Salinity-mediated desorption and fluxes of NH4+ from sediments in the upper estuary can be of similar magnitude to rates of organic nitrogen mineralization and may therefore be important in supporting estuarine productivity when watershed inputs of N are low.

Effect of organic enrichment and thermal regime on denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in hypolimnetic sediments of two lowland lakes

We analyzed benthic fluxes of inorganic nitrogen, denitrification and dissimilatory nitrate reduction to ammonium (DNRA) rates in hypolimnetic sediments of lowland lakes. Two neighbouring mesotrophic (Ca' Stanga; CS) and hypertrophic (Lago Verde; LV) lakes, which originated from sand and gravel mining, were considered. Lakes are affected by high nitrate loads (0.2–0.7 mM) and different organic loads. Oxygen consumption, dissolved inorganic carbon, methane and nitrogen fluxes, denitrification and DNRA were measured under summer thermal stratification and late winter overturn. Hypolimnetic sediments of CS were a net sink of dissolved inorganic nitrogen (−3.5 to −4.7 mmol m −2 d −1) in both seasons due to high nitrate consumption. On the contrary, LV sediments turned from being a net sink during winter overturn (−3.5 mmol m −2 d −1) to a net source of dissolved inorganic nitrogen under summer conditions (8.1 mmol m −2 d −1), when significant ammonium regeneration was measured at the water–sediment interface. Benthic denitrification (0.7–4.1 mmol m −2 d −1) accounted for up to 84–97% of total NO 3 − reduction and from 2 to 30% of carbon mineralization. It was mainly fuelled by water column nitrate. In CS, denitrification rates were similar in winter and in summer, while in LV summer rates were 4 times lower. DNRA rates were generally low in both lakes (0.07–0.12 mmol m −2 d −1). An appreciable contribution of DNRA was only detected in the more reducing sediments of LV in summer (15% of total NO 3 − reduction), while during the same period only 3% of reduced NO 3 − was recycled into ammonium in CS. Under summer stratification benthic denitrification was mainly nitrate-limited due to nitrate depletion in hypolimnetic waters and parallel oxygen depletion, hampering nitrification. Organic enrichment and reducing conditions in the hypolimnetic sediment shifted nitrate reduction towards more pronounced DNRA, which resulted in the inorganic nitrogen recycling and retention within the bottom waters. The prevalence of DNRA could favour the accumulation of mineral nitrogen with detrimental effects on ecosystem processes and water quality.

The effect of increased nitrate loading on nitrate reduction via denitrification and DNRA in salt marsh sediments

The effects of increased nitrogen loading on denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in marsh sediments were studied in permanently submerged subtidal creek sediments and on the tidally inundated vegetated marsh platform in Plum Island Sound estuary, Massachusetts. DNRA and denitrification in surface sediments were measured at all sites using whole‐core incubations and the isotope pairing technique, which allows distinction between denitrification of water column nitrate and coupled nitrification‐denitrification. On the marsh platform, denitrification was also measured at depth in the rhizosphere, using a new approach that combined the push‐pull method and the isotope pairing technique. In tidal creek sediments, fertilization increased denitrification of water column nitrate by approximately one order of magnitude, and coupled nitrification‐denitrification threefold. Coupled nitrification‐denitrification made a significant contribution to the total N2 production in the unfertilized creek but was of minor importance in the fertilized creek due to increased rates of denitrification of water column nitrate. In the surface sediment of the marsh platform, fertilization increased denitrification of water column nitrate by an order of magnitude during inundation of the marsh platform, about 12% of the day. However, coupled nitrification‐denitrification occurring at depth in the rhizosphere was the main denitrification pathway, accounting for more than 50% of the total N2 production in the fertilized as well as in the reference marsh. DNRA was measured in the surface sediment only, where it was comparable in magnitude to denitrification in the fertilized as well as in the unfertilized marsh.

The effect of increased nitrate loading on nitrate reduction via denitrification and DNRA in salt marsh sediments

The effects of increased nitrogen loading on denitrification and dissimilatory nitrate reduction to ammonium (DNRA) in marsh sediments were studied in permanently submerged subtidal creek sediments and on the tidally inundated vegetated marsh platform in Plum Island Sound estuary, Massachusetts. DNRA and denitrification in surface sediments were measured at all sites using whole-core incubations and the isotope pairing technique, which allows distinction between denitrification of water column nitrate and coupled nitrification-denitrification. On the marsh platform, denitrification was also measured at depth in the rhizosphere, using a new approach that combined the push-pull method and the isotope pairing technique. In tidal creek sediments, fertilization increased denitrification of water column nitrate by approximately one order of magnitude, and coupled nitrification-denitrification threefold. Coupled nitrification-denitrification made a significant contribution to the total N2 production in the unfertilized creek but was of minor importance in the fertilized creek due to increased rates of denitrification of water column nitrate. In the surface sediment of the marsh platform, fertilization increased denitrification of water column nitrate by an order of magnitude during inundation of the marsh platform, about 12% of the day. However, coupled nitrification-denitrification occurring at depth in the rhizosphere was the main denitrification pathway, accounting for more than 50% of the total N2 production in the fertilized as well as in the reference marsh. DNRA was measured in the surface sediment only, where it was comparable in magnitude to denitrification in the fertilized as well as in the unfertilized marsh.

Nitrogen retention in a floodplain backwater of the upper Mississippi River (USA)

Backwaters connected to large rivers retain nitrate and may play an important role in reducing downstream loading to coastal marine environments. A summer nitrogen (N) inflow-outflow budget was examined for a flow-regulated backwater of the upper Mississippi River in conjunction with laboratory estimates of sediment ammonium and nitrate fluxes, organic N mineralization, nitrification, and denitrification to provide further insight into N retention processes. External N loading was overwhelmingly dominated by nitrate and 54% of the input was retained (137 mg m−2 day−1). Ammonium and dissolved organic N were exported from the backwater (14 and 9 mg m−2 day−1, respectively). Nitrate influx to sediment increased as a function of increasing initial nitrate concentration in the overlying water. Rates were greater under anoxic versus oxic conditions. Ammonium effluxes from sediment were 26.7 and 50.6 mg m−2 day−1 under oxic and anoxic conditions, respectively. Since anoxia inhibited nitrification, the difference between ammonium anoxic–oxic fluxes approximated a nitrification rate of 29.1 mg m−2 day−1. Organic N mineralization was 64 mg m−2 day−1. Denitrification, estimated from regression relationships between oxic nitrate influx versus initial nitrate concentration and a summer lakewide mean nitrate concentration of 1.27 mg l−1, was 94 mg m−2 day−1. Denitrification was equivalent to only 57% of the retained nitrate, suggesting that another portion was assimilated by biota. The high sediment organic N mineralization and ammonium efflux rate coupled with the occurrence of ammonium export from the system suggested a possible link between biotic assimilation of nitrate, mineralization, and export.

Seasonal effects of zebra mussels on littoral nitrogen transformation rates in Gull Lake, Michigan, U.S.A.

Summary 1 Zebra mussels (Dreissena polymorpha) are successful colonisers of lake littoral habitats and they interact strongly with littoral benthos. Previous research suggests that localised areas colonised by zebra mussels may be hotspots of nitrogen (N) cycling. 2 The effects of zebra mussels on nitrification and denitrification rates were examined approximately every other month for 1 year in Gull Lake, Michigan, U.S.A. Littoral sediment was collected from an area free of zebra mussels and distributed into shallow trays; rocks colonised with zebra mussels were placed in half of the trays, while uncolonised rocks were placed in the remaining trays. After an incubation period of 6–8 weeks in the lake, sediment and zebra mussels were collected from the trays, replaced with new sediment and zebra mussels, and placed in the lake for the next interval. In the laboratory, sediment nitrification and denitrification rates were measured for each tray. 3 Sediment nitrification rates did not increase in the presence of zebra mussels; instead nitrification rates were sensitive to changes in water temperature and increased with increasing exchangeable sediment ammonium. In contrast, denitrification rates increased in sediment trays with zebra mussels in the winter when nitrate (NO3−) availability was high and when Chara did not grow in the trays. 4 Sediment denitrification was NO3−-limited in all seasons, regardless of zebra mussel treatment. However, sediment in the presence of zebra mussels responded less to NO3− addition, suggesting that NO3− limitation of denitrification can be reduced by zebra mussel activity. Zebra mussels have a seasonally variable impact on sediment denitrification rates, and this may translate into altered seasonal patterns of N cycling in localised areas of lakes where they are particularly abundant.

Nitrogen isotopic exchange during maturation of organic matter

The definition of kerogen as the insoluble fraction of sedimentary organic matter leads to the assumption that all of its chemical constituents are autochthonous. Evidence is presented that some of the organic N in kerogen derives from allochthonous mobile and chemically reactive N species (e.g., ammonium, HCN and low molecular weight organic N containing compounds) that are delivered by migrating fluids to stationary kerogen. Reactions of humic compounds (e.g., protokerogen) with ammonium in soil and sediment are facilitated biologically. At higher temperatures, reactions between kerogen in rocks and N containing compounds in mobile fluids are driven geochemically. N isotopic exchange between kerogen and NH4+ or NH3 is evident from experiments where 15N enriched ammonium chloride solutions and source rocks containing kerogen types I, II, IIS and III were heated over 5 years at temperatures of 100, 144 and 196°C. The resulting data corroborate earlier results from hydrous pyrolysis experiments (330°C for up to 144h) and prove that ammonium is readily converted abiogenically to organic N in kerogen at temperatures that approach those in naturally maturing sediments. The propensity of different types of kerogen to react with NH4+ or NH3 increases in the order II<I<IIS<III. Ammonium ion mobility in formation fluids and the ability to isotopically interact with kerogen makes them an effective isotopic buffer for sedimentary organic N. Isotopic exchange tends to homogenize the isotopic compositions of participating pools of N and thus limits the isotopic ranges of organic and inorganic N. Recognition of N exchange in thermally matured sediments offers fresh perspectives and opportunities to constrain the extent and pathways of N containing geofluid migration, especially when synoptically characterizing organic and mineral bound N moieties across gradients of thermal maturity.

Shading by an invasive macrophyte has cascading effects on sediment chemistry

The submersed freshwater macrophyte Utricularia inflata is a recent invader of Adirondack Mountain lakes (NY, USA). Previous experiments suggested that U. inflata can indirectly change nutrient cycling in Adirondack lake ecosystems by reducing the growth of native isoetid macrophytes, which in turn affects sediment chemistry. A 13-week greenhouse experiment was conducted to test the hypothesis that shading can explain the detrimental effect of U. inflata on the native short-statured isoetid, Eriocaulon aquaticum. Eriocaulon aquaticum has a dense root system that oxidizes sediment by releasing oxygen; it also takes up carbon dioxide from sediment. Growth and asexual reproduction of E. aquaticum grown under shaded conditions was reduced significantly compared to an unshaded control (P < 0.001). Shading resulted in sediment changes: redox potential fell from 216 mV in the absence of shading to 76 mV under four layers of shade cloth (P < 0.0001). Shading also increased the concentration of extractable sediment ammonium (P < 0.01), as well as carbon dioxide concentrations (P < 0.0001) and pH of porewater (P < 0.05). The effect of U. inflata on the native isoetids and consequently on sediment chemistry closely matched the impact of shade cloth with similar light attenuation. Our results indicate that the principal mechanism by which U. inflata affects native isoetids and sediment chemistry is shading.

Effects of oxygen and nitrate on nutrient release from profundal sediments of a large, oligo-mesotrophic reservoir, Lake Mathews, California

Lake Mathews is a large, oligo-mesotrophic reservoir located in Southern California. The reservoir has elevated levels of nitrate and periodically experiences hypolimnetic anoxia. Experimental sediment-water chamber incubations and reservoir water quality monitoring were conducted to evaluate how oxygen and nitrate in overlaying water affect nutrient release from profundal sediments and internal nutrient loading. In experimental incubations, under nitrate-free anoxic conditions, sediment nutrient release rates were 3.4 ± 0.8 mg-P/m2 ·d for phosphate and 2.8 ± 1.2 mg-N/m2 ·d for ammonia (average ± standard deviation; n = 6). Oxygen repressed phosphate release and greatly diminished ammonia release from sediments in experimental incubations while nitrate only repressed phosphate release. Similar nutrient release dynamics were observed in the reservoir. Nutrient release rates estimated from seasonal nutrient profiles collected from the reservoir were 3.4 mg-P/m2 ·d for phosphate and 2.5 mg-N/m2 ·d for ammonia. Ammonia accumulation in the hypolimnion commenced with the onset of anoxic conditions, but phosphate accumulation did not start until nitrate disappeared from bottom waters approximately 6 weeks later. The time lag decreased total internal phosphorus loading by approximately 25% relative to hypothetical nitrate-free conditions. Laboratory and field data show that both oxygen and nitrate repress sediment phosphate release, likely via the maintenance of an oxidized surficial sediment layer that retains phosphate in iron-oxide complexes. However, only oxygen and not nitrate was effective in decreasing sediment ammonia release, likely by enhancing biological nitrification and assimilation in surficial sediments under oxic conditions. A number of in-lake management strategies have been developed to inhibit internal nutrient loading including calcium nitrate addition, aluminum sulfate addition, and oxygenation. In our view, the deliberate addition of nitrate to lakes and reservoirs poses several risks that must be carefully considered when evaluating strategies to control sediment phosphorus release.

Seasonal Influence of the Needle Rush Juncus roemarianus on Saltmarsh Pore Water Geochemistry

Previous studies have shown that saltmarsh macrophytes have a significant influence on sediment biogeochemistry, both through radial release of oxygen from roots and also via primary production and release of labile organic exudates from roots. To assess the seasonal influence of the needle rush, Juncus roemarianus, on saltmarsh sediment geochemistry, pore waters and sediments were collected from the upper 50 cm of two adjacent sites, one unvegetated and the other vegetated by Juncus roemarianus, in a Georgia saltmarsh during winter and summer. Pore waters collected at 1- to 2-cm intervals were analyzed for pH, alkalinity, dissolved phosphate, ammonium, Fe(II), Fe(III), Mn(II), sulfide, sulfate, and organic carbon. Sediments were collected at 5-cm intervals and analyzed for iron distribution in the solid phase using a two-step sequential extraction. The upper 50 cm of the sediment pore waters are mostly sulfidic during both winter and summer. The pore water and sediment geochemistry suggest organic matter degradation is coupled mostly to Fe(III) and sulfate reduction. In summer, there is greater accumulation of alkalinity, sulfide, ammonium, and phosphate in the pore waters and lower levels of ascorbate extractable Fe, which is presumed to be comprised primarily of readily reducible Fe(III) oxides, in the sediments, consistent with higher organic matter degradation rates in summer compared to winter. Lower pH, alkalinity, ammonium, and sulfide concentrations in sediments with Juncus, compared to nearby unvegetated sediments, is consistent with release of oxygen into the Juncus rhizosphere, especially during summer.

Importance of submarine groundwater discharge as a source of nutrients for the Neuse River Estuary, North Carolina

Seepage rate and chemical composition of groundwater discharge entering the Neuse River Estuary (NRE) were quantified over an annual cycle from July 2005 through June 2006. Lee type seepage meters were deployed at eight locations within the NRE to quantify the amount of submerged groundwater discharge (SGD) entering the system. Sediment porewater nitrate (NO3−), ammonium (NH4+), and phosphate (PO4−3) were also quantified at each of these locations to determine groundwater chemical composition. Seepage rates for the system ranged from 0.004 to 0.035 m3 m−2 d−1. Both the average and median value for the system-wide SGD were 0.01 m3 m−2d−1. There were no significant differences between upstream and downstream seepage rates or between those at the north and south side of the estuary. Seepage rates varied greatly in time and space. Discharging groundwater was NO3− deplete but highly enriched in NH4+. Porewater PO4−3 levels varied but were usually present below Redfield values due to NH4+ enrichment. SGD nutrient loading represented a small part of watershed nitrogen and phosphorus loading, 0.8% and 1.0%, respectively.

Origins and temporal scales of hypoxia on the Louisiana shelf: Importance of benthic and sub-pycnocline water metabolism

Hypoxic-to-anoxic conditions (2–0 mg O 2 l − 1 ) occur in the bottom waters of the northern Gulf of Mexico on the Louisiana shelf west of the Mississippi river delta during late spring and summer where the rate of oxygen consumption exceeds its rate of input from physical transport plus photosynthetic generation. Although consumption of oxygen in the water column primarily via oxic respiration is an important process, the loss of oxygen at and near the seafloor may also be an important sink contributing to seasonal low oxygen conditions in the relatively shallow overlying waters in this region. Associated with the flux of oxygen into the sediments is the flux of nutrients out of the sediments from the remineralization of sedimentary organic matter via a number of possible electron acceptors. The nutrients that are released from the sediment can potentially stimulate further primary production. This can lead to generation of oxygen in the water column and production of organic matter, much of which can be transported to the seafloor where it again becomes a sink for oxygen. A non-steady-state data driven numeric benthic–pelagic model was developed to investigate the role of sediment and water-column metabolism in the development of hypoxia on the Louisiana shelf. The model simulations bare out the importance of sediment oxygen demand as the primary sink for oxygen at the beginning and end of a hypoxic event on the shelf, but once hypoxia has developed, the sediments, now isolated from the oxygen-rich surface waters, are driven into a more anoxic mode, becoming more dependent on sulfate and metal reduction. As a result, the bottom water near the pycnocline becomes the major sink for oxygen. Model simulations also suggest that there is a delay of several weeks between metabolite production (especially ammonium) and its efflux from the sediments. Thus the maximum sediment ammonium export occurs in September and October in time to fuel autumnal phytoplankton production, thereby continuing a biogeochemical cycle that expands the temporal and spatial scales of hypoxia on the Louisiana shelf.

The relationship between Chironomus plumosus burrows and the spatial distribution of pore‐water phosphate, iron and ammonium in lake sediments

Summary1. To study the influence of chironomids on the distribution of pore‐water concentrations of phosphate, iron and ammonium, we conducted a laboratory experiment using mesocosms equipped with two‐dimensional pore‐water samplers, filled with lake sediment and populated with different densities of Chironomus plumosus.2. Specially designed mesocosms were used in the study. A 6‐mm deep space between the front plate and the pore‐water sampler at the back plate was just thick enough to allow the chironomids to live undisturbed, yet thin enough to force all the burrows into a two‐dimensional plane.3. The courses of the burrows were observed during the experiment as oxidised zones surrounding them, as well as being identified with an X‐ray image taken at the end of the experiment.4. We investigated the relationship between C. plumosus burrows and spatial patterns of pore‐water composition. Concentrations of the three ions were significantly less around ventilated burrows (54% to 24%), as bioirrigation caused a convective exchange of pore‐water enriched with dissolved species compared with the overlying water, and also because oxygen imported into the sediment resulting in nitrification of ammonium, oxidation of iron(II) and a co‐precipitation of phosphate with Fe(III) oxyhydroxides.5. In mesocosms with chironomids, new (redox) interfaces occurred with diffusive pore‐water gradients perpendicular to the course of burrows and the site of major phosphate, ammonium and iron(II) release shifted from the sediment surface to the burrow walls.

Inhibition of ammonia release from anoxic profundal sediments in lakes using hypolimnetic oxygenation

Ammonia is an important compound in freshwater ecosystems. It can stimulate phytoplankton growth, exhibit toxicity to aquatic biota, and exert an oxygen demand in surface waters. In productive lakes, ammonia commonly accumulates in bottom waters in conjunction with the onset of anoxic conditions, thereby degrading lake water quality. Sediment cores from 12 lakes and reservoirs were incubated in experimental chambers to examine how dissolved oxygen levels impact sediment release of ammonia. Sediments from all sites released ammonia under anoxic conditions. Release rates for oligo/mesotrophic, meso/eutrophic, and eutrophic/hypereutrophic sites were <5, 5–10, and >15 mg-N m −2 day −1, respectively. Under oxic conditions, ammonia release was negligible in sediments from oligotrophic and mesotrophic sites, and generally lower or reversed in sediments from eutrophic sites. Ammonia release under anoxic conditions is the result of ammonia build up in sediments due to a loss of biological nitrification and a decrease in ammonia assimilation by anaerobic microorganisms. Lake oxygenation, the dissolution of pure oxygen gas into surface waters, can improve water quality in the bottom of thermally stratified lakes, and potentially in shallow lakes, by eliminating sediment ammonia release through the maintenance of a well-oxygenated sediment–water interface.

Nitrogen dynamics in sediment during water level manipulation on the Upper Mississippi River

AbstractNitrogen (N) has been linked to increasing eutrophication in the Gulf of Mexico and as a result there is increased interest in managing and improving water quality in the Mississippi River system. Water level reductions, or ‘drawdowns’, are being used more frequently in large river impoundments to improve vegetation growth and sediment compaction. We selected two areas of the Upper Mississippi River system (Navigation Pool 8 and Swan Lake) to examine the effects of water level drawdown on N dynamics. Navigation Pool 8 experienced summer drawdowns in 2001 and 2002. Certain areas of Swan Lake have been drawn down annually since the early 1970s where as other areas have remained inundated. In the 2002 Pool 8 study we determined the effects of sediment drying and rewetting resulting from water level drawdown on (1) patterns of sediment nitrification and denitrification and (2) concentrations of sediment and surface water total N (TN), nitrate, and ammonium (NH). In 2001, we only examined sediment NH and TN. In the Swan Lake study, we determined the long‐term effects of water level drawdowns on concentrations of sediment NH and TN in sediments that dried annually and those that remained inundated. Sediment NH decreased significantly in the Pool 8 studies during periods of desiccation, although there were no consistent trends in nitrification and denitrification or a reduction in total sediment N. Ammonium in sediments that have dried annually in Swan Lake appeared lower but was not significantly different from sediments that remain wet. The reduction in sediment NH in parts of Pool 8 was likely a result of increased plant growth and N assimilation, which is then redeposited back to the sediment surface upon plant senescence. Similarly, the Swan Lake study suggested that drawdowns do not result in long term reduction in sediment N. Water level drawdowns may actually reduce water retention time and river‐floodplain connectivity, while promoting significant accumulation of organic N. These results indicate that water level drawdowns are probably not an effective means of removing N from the Upper Mississippi River system. Copyright © 2006 John Wiley &amp; Sons, Ltd.

Water and sediment quality at mussel (Unionidae) habitats in the Ochlockonee River of Florida and Georgia

Water chemical analyses, porewater and whole sediment chemical analyses, and pore- water and whole sediment toxicity testing were performed as part of a combined effort between the US Fish and Wildlife Service and the US Geological Survey. These analyses were used to predict impaired stream sites that may impede a healthy natural riverine community. The analyses also revealed differences between sites that currently support and those that have ceased to support mus- sel populations. We estimated risk scores for the riverine community based on water and sediment characteristics. To identify and rank habitat in need of restoration, the risk estimation was derived by comparing collected data to water quality standards, sediment quality guidelines and toxicity test controls. High-risk scores often coincided with areas that no longer support historical freshwater mussel populations. Based on the data collected, factors thought to impede the existence of a natural riverine community included: sediment toxicity (porewater and whole sediment), sediment lead, sediment manganese, sediment ammonia, and low dissolved oxygen.

The significance of fixed ammonium in Palaeozoic sediments for the generation of nitrogen-rich natural gases in the North German Basin

In contrast to predominantly hydrocarbon-rich natural gases in the western part of the Central European Basin (CEB), accumulations of natural gases from the eastern part of the North German Basin (NGB) are nitrogen-rich with up to 90% N2. This study is focused on the behaviour of fixed ammonium in clay minerals of organic-rich Palaeozoic sediments in the eastern part of the NGB as a major source of nitrogen-rich natural gases. Carboniferous shales have been investigated for a better understanding of nitrogen fixing during diagenesis, storage during burial and release during devolatilization processes or fluid–rock interactions. The total nitrogen contents in the studied Carboniferous shales of the NGB reach up to 2700 ppm with an inorganic fixed portion (in the form of NH4+–N) of more than 60%. The results of this study indicate an increasing proportion of the mineralogically fixed ammonium with increasing thermal maturity and storage up to catagenetic conditions. The isotopic composition of fixed-NH4 is relatively homogeneous in the majority of the shales and ranges from +1 to +3.5‰. In contrast, samples from the basin centre show a significant decrease in ammonium contents down to 460 ppm coupled with a shift in δ15N up to +5.6‰ suggesting a release of nitrogen on a large scale. Calculation of nitrogen loss and isotopic fractionation indicate that more than 30% of nitrogen was released as ammonium probably as a consequence of fluid-rock interaction with highly saline brines.

Sediment and Water Nutrient Characteristics in Patches of Submerged Macrophytes in Running Waters

(1) The relative importance of sediments and water as nutrient sources for submerged macrophytes in running waters is poorly understood. Here we present water and sediment nutrient characteristics within macrophyte patches in Bavarian rivers. (2) No significant differences between early (June/July) and late summer (August/September) sediment nutrient characteristics could be detected within macrophyte patches. Therefore, a single sediment sample per macrophyte patch was considered to be sufficient for characterising nutrient concentrations during the main growing season in running waters. (3) Sediment TP (total phosphorus) is not a useful parameter for predicting trophic status in running waters. Sediment porewater SRP (soluble reactive phosphorus) concentration is not correlated to water body SRP or TP concentration; nor is it correlated with sediment TP content. Potamogeton coloratus, a oligotrophic species, is associated with low overlying and porewater SRP concentrations but high sediment TP content. Eutrophic species, such as Potamogeton pectinatus, are associated with low sediment TP. (4) It is hypothesized that Chara hispida primarily takes up sediment ammonia for nitrogen nutrition. (5) Nutrient characteristics of the water body and the sediment of eight macrophyte species in Bavarian rivers are described.