Red Squirrels Research Articles

An assessment of whether age, sex, and reproductive status affect bait uptake by grey squirrels

AbstractThe grey squirrel (Sciurus carolinensis) is an invasive alien species in the United Kingdom (UK). The economic impact of grey squirrels on England and Wales forestry is estimated to be around £37 million ($47 million USD) per year, and the presence of this species has caused the decline of the native red squirrel (Sciurus vulgaris) due to interspecific competition and transmission of diseases. Oral contraceptives, delivered in baits, are being developed to control the number of grey squirrels in the UK. Bait uptake can be affected by many factors that must be understood to develop effective delivery methods. As sexually mature females drive population growth, targeting these females with oral contraceptives should be a priority to maximize the impacts of oral contraceptives on grey squirrel populations. This study investigated whether sex, age, or reproductive status affected bait uptake by grey squirrels. We fitted 138 squirrels with passive integrated transponders (PIT‐tags) in 4 woodland sites in the UK and measured bait uptake using squirrel‐specific bait dispensers (hoppers) fitted with PIT‐tag readers and baited with hazelnut paste and the biomarker rhodamine B for 5 days in 2018 and 2022. Overall, 49% of squirrels consumed bait from the hoppers and bait was most likely to be consumed by reproductively active females. Immature squirrels made more visits per day to hoppers and visited more hoppers per day compared with adults, though the results for immature animals were highly variable. Sex, age, and reproductive status were not found to affect bait uptake in grey squirrels at the density of squirrels (3.9–6.3/ha) and bait hoppers (3/ha) tested in this study. The results confirmed that it should be possible to deliver oral contraceptives equally to different individuals within populations of grey squirrels within a relatively short period. The findings of this study could be used to inform targeted interventions aimed at delivering baits containing contraceptives or vaccines to grey squirrels.

Wildlife-Vehicle Collisions and Mitigation: Current Status and Factor Analysis in South Korea.

Severe habitat loss and fragmentation due to extensive road development have escalated wildlife-vehicle collisions (WVCs) as one of the major causes of wildlife mortality. This study, spanning 9 years from 2009 to 2017, presents comprehensive WVC data in South Korea, including species composition, seasonal and regional patterns, and road factors influencing WVCs, aiming to analyze their impact and propose effective mitigation strategies. We collected WVC data with road variables for 9 years from 4561 km of nationwide monitoring road sections and analyzed the data to understand the relationship between WVCs and road characteristics, as well as species-specific patterns. A nationwide survey identified 13,606 WVCs involving 143 terrestrial vertebrate species, and patterns and models of the top seven mammal species (raccoon dog (Nyctereutes procyonoides), Siberian chipmunk (Eutamias sibiricus), Siberian weasel (Mustela sibirica), water deer (Hydropotes inermis), red squirrel (Sciurus vulgaris), Korean hare (Lepus coreanus), and leopard cat (Prionailurus bengalensis)) were presented. Patterns revealed declines in WVCs overall, except for water deer. Although spatial differences in WVCs seemed linked more to wildlife habitats, certain road features correlated both positively or negatively with WVC frequency, highlighting complexities in the effectiveness of preventative measures. For effective mitigation and prevention of WVCs, comprehensive strategies considering species traits, seasonality, and road types should be implemented.

Holocene mammals (Insectivora, Rodentia, Chiroptera) of Dollsteinhola Cave, Western Norway

The Dolisteinhola cave comprises a sequence of Holocene deposits dating from the late Atlanticum to the first half of the Subboreal period. Climate-sensitive species were found in layers V (Sciurus vulgaris) and layers II - III, IV, IV - V (Apodemus flavicollis). Two humerus of Barbastella barbastellus were also recognised. The faunal assemblage were grouped in three climatic complexes: species which lived both in cold and warm climates; species connected with warmer phases of the climate and species typical for a cold climate.

Influence of ammonia-water fog formation on ammonia dispersion from a liquid spill

Ammonia is expected to play an important role in the green transition, both as a hydrogen carrier and a zero-emission fuel. The use of refrigerated ammonia is attractive due to its relatively high volumetric energy density and increased safety compared to pressurized solutions. Ammonia is highly toxic, and with new applications and increased global demand come stricter requirements for safe handling. Cold gaseous ammonia following a spill of refrigerated ammonia will in contact with humid air cause fog formation. In an environment rich in ammonia, these droplets will due to ammonia’s strong hygroscopicity consist of considerable amounts of liquid ammonia as well as water. Fog formation affects the ammonia-air density and thus influences the dispersion dynamics, with a potentially significant impact on hazardous zones. In this work, we present a CFD model including an ammonia-water fog formation model based on accurate thermodynamics. This includes modeling the vapor–liquid equilibrium and accounting for the exothermic mixing of ammonia and water. We apply this CFD model to relevant cases and demonstrate the significant impact of the fog. We analyze the effect of varying relative humidity, fog visibility, influence of wind, and pool evaporation rate. Finally, we model the Red Squirrel test 1F and show how the fog formation could have influenced the dispersion behavior.

Assessing the Effects of Habitat Loss and Deterioration on a Red Squirrel Translocation Site: Insights for Future Conservation Management.

Translocations, a conservation tool used to conserve and restore dwindling species, are often associated with high failure rates. Inadequate long-term monitoring of both populations and their introduction sites beyond the initial years post-translocation creates a gap in our understanding of the factors that determine translocation success or failure, resulting in less informed projects in the future. This lack of long-term monitoring is partly caused by the absence of a well-defined framework by which the success of the translocation can be measured, leading to premature and sometimes inaccurate assessments of their outcome. We investigated the long-term outcome of a red squirrel translocation in the west of Ireland, specifically assessing the habitat changes in the translocation site since the introduction in 2005, and their impact on the capacity of the forest to sustain a population of a given size. Using digitised historical map data, we showed that the translocation site experienced a 53% reduction in suitable habitat. Additionally, there was a 41%-81% reduction in the total number of red squirrels the forest could support, according to feeding survey data. Clear-felling, a forest fire and a shift in tree species composition collectively contributed to this decline in site suitability. This investigation underscores the complexity of translocation projects and emphasises the pivotal role of habitat quality in their outcomes. We advocate for detailed habitat assessments during the planning phase, avoidance of unstable habitats as translocation sites, and the implementation of long-term monitoring practices.

Pathogens detected in ticks (Ixodes ricinus) feeding on red squirrels (Sciurus vulgaris) from city parks in Warsaw

The European red squirrel (Sciurus vulgaris) is a common host for Ixodes ricinus ticks in urban and rural habitats, however, studies on ticks and tick-borne pathogens (TBPs) of squirrels have not been conducted in Poland yet. Thus, the aims of the current study were to assess and compare the prevalence and abundance of ticks on red squirrels trapped at two sites in the Warsaw area (in an urban forest reserve and an urban park) and using molecular tools, to assess the genetic diversity of three pathogens (Borrelia burgdorferi sensu lato, Rickettsia and Babesia spp.) in I. ricinus ticks collected from squirrels. For the detection of Rickettsia spp. a 750 bp long fragment of the citrate synthase gltA gene was amplified; for B. burgdorferi s.l. 132f/905r and 220f/824r primers were used to amplify the bacterial flaB gene fragments (774 and 605 bp, respectively) and for Babesia spp., a 550 bpfragment of 18S rRNA gene was amplified. In total, 91 red squirrels were examined for ticks. There were differences in tick prevalence and mean abundance of infestation in squirrels from the urban forest reserve and urban park. Three species of B. burgdorferi s.l., Rickettsia spp., and Babesia microti were detected in ticks removed from the squirrels. Our results broaden knowledge of S. vulgaris as an important host for immature I. ricinus stages and support the hypothesis that red squirrels act as a reservoir of B. burgdorferi. Moreover, we conclude that red squirrels may also play a role in facilitating the circulation of other pathogens causing serious risk of tick-borne diseases in natural and urban areas.

An assessment of seasonal bait uptake by individual grey squirrels to develop a delivery system for oral contraceptives.

Globally, human-wildlife conflicts continue to increase, owing to human population growth and expansion. Many of these conflicts concern the impacts of invasive non-native species. In the UK, the invasive, non-native grey squirrel Sciurus carolinensis negatively affects tree health and has caused the decline of the native red squirrel Sciurus vulgaris. Oral contraceptives are being developed to manage the impacts of the grey squirrel. To be effective, contraceptives will need to be deployed at a landscape scale, and will require a delivery system that is practical and economically viable. Understanding grey squirrel feeding behaviour is important so that delivery methods can be designed so that a sufficient number oftarget individuals receive an effective contraceptive dose at a time of year that will ensure their infertility throughout peak times of breeding. The main aims of this study were to assess how sex, season, squirrel density and bait point density influenced; (1) the probability of a squirrel visiting a feeder and (2) the amount of bait consumed from feeders. Field trials were conducted on six woodland populations of squirrels in three seasons, with four days of bait deployment via purpose-designed squirrel-specific bait hoppers with integrated PIT-tag readers. It was possible to deliver multiple doses on most days to most male and female grey squirrels, with bait deployment more likely to be effective in spring, immediately before the second annual peak in squirrel breeding, followed by winter, immediately before the first peak in breeding. The results from this study could be used to design methods for delivering oral contraceptive baits to grey squirrels in the future and the methods used could be applied to other small mammal species and other bait delivery systems. © 2024 Crown copyright and The Author(s). Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry. This article is published with the permission of the Controller of HMSO and the King's Printer for Scotland.

Finite element analysis of feeding in red and gray squirrels (Sciurus vulgaris and Sciurus carolinensis).

Invasive gray squirrels (Sciurus carolinensis) have replaced the native red squirrel (Sciurus vulgaris) across much of Great Britain over the last century. Several factors have been proposed to underlie this replacement, but here we investigated the potential for dietary competition in which gray squirrels have better feeding performance than reds and are thus able to extract nutrition from food more efficiently. In this scenario, we hypothesized that red squirrels would show higher stress, strain, and deformation across the skull than gray squirrels. To test our hypotheses, we created finite element models of the skull of a red and a gray squirrel and loaded them to simulate biting at the incisor, at two different gapes, and at the molar. The results showed similar distributions of strains and von Mises stresses in the two species, but higher stress and strain magnitudes in the red squirrel, especially during molar biting. Few differences were seen in stress and strain distributions or magnitudes between the two incisor gapes. A geometric morphometric analysis showed greater deformations in the red squirrel skull at all bites and gapes. These results are consistent with our hypothesis and indicate increased biomechanical performance of the skull in gray squirrels, allowing them to access and process food items more efficiently than red squirrels.

Urbanisation has impacted the population genetic structure of the Eurasian red squirrel in Japan within a short period of 30 years

Human activities often induce maladaptive effects in urban wildlife, such as increased inbreeding and decreased gene flow, consequently leading to a loss of biodiversity. Although maladaptive effects are commonly reported in urban wildlife, some wildlife species are not affected. Understanding the conditions and factors that affect the genetic structure of wildlife is crucial for its conservation in urban environments. Eurasian red squirrels Sciurus vulgaris in Obihiro City, Hokkaido, Japan, have settled in large residential lots with a high risk of vehicle collisions for approximately 30 years, raising the possibility that the urban population would be genetically isolated from nearby rural populations and may experience a rapid decrease in genetic diversity. In this study, we analysed the population structure, genetic distance, and nucleotide diversity of squirrels in the Obihiro area using genome-wide single nucleotide polymorphisms (SNPs). Principal component analysis and ADMIXTURE showed that urban and rural squirrel populations formed distinct clusters with intermediate urban and rural boundary populations. Genetic distances between the urban populations were greater than that of other pairs. Nucleotide diversities were lower in urban populations than in other populations, suggesting limited gene flow between urban and other populations, possibly due to urbanisation. The change in the genetic characteristics of urban squirrel populations during this short period demonstrates the strong impact of urbanisation. Our findings suggest that a genome-wide approach to the genetic structure of wildlife contributes to its conservation in urban environments.

Assessing the strategic role of urban green spaces for habitat connectivity in multi-family residential plots

Urban green spaces are key for maintaining and restoring habitat connectivity within cities. Despite substantial investigations on the contribution to connectivity of different types of urban green spaces, the specific contribution of green spaces located in multifamily residential (MFR) plots has yet to be assessed. Estimating this contribution is crucial given the multiple roles fulfilled by these green spaces in urban planning. To achieve this goal, we focused on four taxa: the European hedgehog (Erinaceus europaeus), the Red squirrel (Sciurus vulgaris), forest passerine birds and moths. We assessed the potential habitat connectivity for each taxon across the metropolitan urban area of Lyon (France), with landscape graphs built using 1-metre resolution land cover maps. Considering the current state as a reference, we then designed five land cover change scenarios affecting habitat distribution in the MFR plots: (i) maximum and (ii) minimum theoretical connectivity (references), (iii) improve quality of existing green spaces, (iv) improve quantity of green spaces with sub-optimal quality and, (v) maximum restoration (management scenarios). The taxon- and scenario-specific impacts highlight the crucial contribution of private spaces to habitat connectivity. For all taxa, while the MFR only cover 8 % of the study area, connectivity would increase by up to 60 % if these plots were greened. In contrast, sealing these plots could reduce overall connectivity by up to 40 %. The interpolation of local connectivity metrics for each habitat patch and each MFR plot allowed us to identify the most relevant plots for urban greening. Because our approach can improve habitat connectivity at different scales, from neighbourhoods to entire urban areas, it could prove useful for landscape planning in most urban settings.

Eurasian red squirrels (Sciurus vulgaris) and mesocarnivores in a Mongolian protected area

Abstract Prey-predator interactions across time and space strongly influence many animal communities. This study unveils the first insights into the ecology of the Eurasian red squirrel (Sciurus vulgaris) in Mongolia, and specifically in Bogd Khan Mountain Strictly Protected Area. We used by-catch data obtained from camera traps to analyze activity patterns and potential interactions with mammalian predators. Red squirrels exhibited primarily diurnal activity with occasional nocturnal forays, while potential predators like foxes (Vulpes vulpes, Vulpes corsac) and martens (Martes foina, Martes zibellina) displayed cathemeral and nocturnal patterns, respectively. The diurnal Pallas’s cat (Otocolobus manul) showed the greatest activity overlap with squirrels. Suggesting predator avoidance behavior potentially mediated by olfactory cues, squirrel activity was negatively impacted by marten presence, which was in turn potentially affected by human disturbance. We highlight the need for further investigations, particularly regarding the dietary composition of Pallas’s cats in forested habitats and the broader ecological implications of human disturbance on predator–prey dynamics within this crucial conservation area.

Camera traps equipped with macro lenses as a tool for monitoring arboreal small mammals: a case study in an agroecosystem (NE Italy)

Despite their increasing use, camera traps as a monitoring tool for arboreal small mammals leave room for further improvements to increase their effectiveness. In the summer of 2023, we conducted a small mammal survey in a wooded area of a lowland agroecosystem in the Veneto region, using standard camera traps equipped with macro lenses for close-up shooting. This camera trap technique made it possible to contact three species of small mammals in the tree-shrub layer: Eurasian red squirrel Sciurus vulgaris, wood mouse Apodemus sylvaticus, and black rat Rattus rattus. The use of macro lenses combined with the standard camera trapping technique made it possible to obtain better quality images and more information even on smaller species compared to more traditional camera traps.

'Ripple effects' of urban environmental characteristics on cognitive performances in Eurasian red squirrels.

Urban areas are expanding exponentially, leading more species of wildlife living in urban environments. Urban environmental characteristics, such as human disturbance, induce stress for many wildlife and have been shown to affect some cognitive traits, such as innovative problem-solving performance. However, because different cognitive traits have common cognitive processes, it is possible that urban environmental characteristics may directly and indirectly affect related cognitive traits (the ripple effect hypothesis). We tested the ripple effect hypothesis in urban Eurasian red squirrels residing in 11 urban areas that had different urban environmental characteristics (direct human disturbance, indirect human disturbance, areas of green coverage and squirrel population size). These squirrels were innovators who had previously repeatedly solved a food extraction task (the original task). Here, we examined whether and how urban environmental characteristics would directly and indirectly influence performance in two related cognitive traits, generalisation and (long-term) memory. The generalisation task required the innovators to apply the learned successful solutions when solving a similar but novel problem. The memory task required them to recall the learned solution of the original task after an extended period of time. Some of the selected urban environmental characteristics directly influenced the task performance, both at the population level (site) and at individual levels. Urban environmental characteristics, such as increased direct and indirect human disturbance, decreased the proportion of success in solving the generalisation task or the memory task at the population (site) level. Increased direct human disturbance and less green coverage increased the solving efficiency at individual levels. We also found an indirect effect in one of the urban environmental characteristics, indirect human disturbance, in the generalisation task, but not the memory task. Such an effect was only seen at the individual level but not at the population level; indirect human disturbance decreased the first original latency, which then decreased the generalisation latency across successes. Our results partially support the ripple effect hypothesis, suggesting that urban environmental characteristics are stressors for squirrels and have a greater impact on shaping cognitive performance than previously shown. Together, these results provide a better understanding of cognitive traits that support wildlife in adapting to urban environments.

Evolutionary lability of food caching behaviour in mammals.

Food hoarding provides animals access to resources during periods of scarcity. Studies on mammalian caching indicate associations with brain size, seasonality and diet but are biased to a subset of rodents. Whether the behaviour is generalizable at other taxonomic scales and/or is influenced by other ecological factors is less understood. Population density may influence food caching due to food competition or pilferage, but this remains untested in a comparative framework. Using phylogenetic analyses, we assessed the role of morphology (body and brain size), climate, diet breadth and population density on food caching behaviour evolution at multiple taxonomic scales. We also used a long-term dataset on caching behaviour of red squirrels (Tamiasciurus fremonti) to test key factors (climate and population density) on hoarding intensity. Consistent with previous smaller scale studies, we found the mammalian ancestral state for food caching was larderhoarding, and scatterhoarding was derived. Caching strategy was strongly associated with brain size, population density and climate. Mammals with larger brains and hippocampal volumes were more likely to scatterhoard, and species living at higher population densities and in colder climates were more likely to larderhoard. Finer-scale analyses within families, sub-families and tribes indicated that the behaviour is evolutionary labile. Brain size in family Sciuridae and tribe Marmotini was larger in scatterhoarders, but not in other tribes. Scatterhoarding in tribe Marmotini was more likely in species with lower population densities while scatterhoarding in tribe Sciurini was associated with warmer climates. Red squirrel larderhoarding intensity was positively related to population density but not climate, implicating food competition or pilferage as an important mechanism mediating caching behaviour. Our results are consistent with previous smaller-scale studies on food caching and indicate the evolutionary patterns of mammalian food caching are broadly generalizable. Given the lability of caching behaviour as evidenced by the variability of our results at finer phylogenetic scales, comparative analyses must consider taxonomic scale. Applying our results to conservation could prove useful as changes in population density or climate may select for different food caching strategies and thus can inform management of threatened and endangered species and their habitats.

WILDbase: towards a common database to improve wildlife disease surveillance in Europe.

BackgroundTo be better prepared for emerging wildlife-borne zoonoses, we need to strengthen wildlife disease surveillance.AimThe aim of this study was to create a topical overview of zoonotic pathogens in wildlife species to identify knowledge gaps and opportunities for improvement of wildlife disease surveillance.MethodsWe created a database, which is based on a systematic literature review in Embase focused on zoonotic pathogens in 10 common urban wildlife mammals in Europe, namely brown rats, house mice, wood mice, common voles, red squirrels, European rabbits, European hedgehogs, European moles, stone martens and red foxes. In total, we retrieved 6,305 unique articles of which 882 were included.ResultsIn total, 186 zoonotic pathogen species were described, including 90 bacteria, 42 helminths, 19 protozoa, 22 viruses and 15 fungi. Most of these pathogens were only studied in one single animal species. Even considering that some pathogens are relatively species-specific, many European countries have no (accessible) data on zoonotic pathogens in these relevant animal species. We used the Netherlands as an example to show how this database can be used by other countries to identify wildlife disease surveillance gaps on a national level. Only 4% of all potential host-pathogen combinations have been studied in the Netherlands.ConclusionsThis database comprises a comprehensive overview that can guide future research on wildlife-borne zoonotic diseases both on a European and national scale. Sharing and expanding this database provides a solid starting point for future European-wide collaborations to improve wildlife disease surveillance.

Boom and bust: the effects of masting on seed predator range dynamics and trophic cascades

AbstractAimSpatiotemporal variation in resource availability is a strong driver of animal distributions. In the northern hardwood and boreal forests of the northeastern United States, tree mast events provide resource pulses that drive the population dynamics of small mammals, including the American red squirrel (Tamiasciurus hudsonicus), a primary songbird nest predator. This study sought to determine whether mast availability ameliorates their abiotic limits, enabling red squirrel elevational distributions to temporarily expand and negatively impact high‐elevation songbirds.LocationNortheastern United States.MethodsWe used two independent datasets to evaluate our hypotheses. First, we fit a dynamic occupancy model using data from camera trap surveys to evaluate red squirrel distributional responses to pulses in the tree mast. We also assessed population responses using systematic auditory surveys analysed with an open‐population binomial mixture model. Further, we used modelled red squirrel abundance in nest‐survival models to evaluate whether their abundance is correlated with the daily nest survival of three songbird species.ResultsThe tree mast provided a critical resource pulse that resulted in a two‐fold increase in the annual elevational distribution of red squirrels. The elevational distribution of red squirrels ranged from a minimum of ~450 m (range: 663–1145 m asl) following two consecutive years without a masting event to a maximum of over 1000 m (range: 443–1545 m asl) after a large mast event. The daily nest survival of three songbird species tended to decline with an increase in the abundance of red squirrels.Main ConclusionsTree mast is a central biological phenomenon in many temperate and boreal forests. This study reveals how this resource pulse results in range changes in a small mammal that is both a seed and bird predator, as well as prey for many carnivores. Thus, understanding this phenomenon can inform the conservation and management of northern forests, including breeding songbirds.

Short Study on Ecological Pictures in Walden

Walden is a literary masterpiece written by American writer Henry David Thoreau (1817-1862), which records his living alone in Walden Pond, far away from money-obsessed society, embracing the simple life of nature with his heart, and demonstrating the harmonious ecological beauty of Walden Pond. In this novel, Thoreau vividly shows the harmonious and interdependent relationship between man and nature through the ecological pictures of the delicious evening and red squirrel in the Walden Pond, and emphasizes the unique spiritual value given by nature to human beings. This paper attempts to use literature research and graphic marking ways to appreciate the harmonious atmosphere of delicious night in Walden Pond and the lively state of red squirrels in winter from the Angle of plot and animal description. By combining theory with practice, the conclusion of this paper is: human beings should overcome the limitations of anthropocentrism, protect animals, respect nature, and establish a “community of love” with nature, the concept of harmonious coexistence between humans and nature, or they will be punished by nature. In-depth exploration and interpretation of Walden Pond is of great significance for enhancing people’s awareness of ecological crisis, promoting ecological governance, helping people rationally view the relationship between man and nature, and respecting and protecting nature.

Seasonal variation in the activity pattern of red squirrels and their mammalian predators

Camera traps are a powerful tool to monitor the activity pattern of species over long time periods. Camera data can be used to analyze activity patterns of or temporal niche partitioning among species. Temporal niche partitioning plays an important role for species coexistence and is under constant evolutionary pressure from predator-prey relationships. Our study aimed to investigate temporal shifts in activity patterns of red squirrels and two mammalian predators, red fox and marten (Martes spec.). Previous studies yielded different activity patterns for these species depending on location, season, predator-prey interactions, and food- availability. We used camera traps to monitor the activity of squirrels, red fox and martens throughout a whole year in a mountainous forest in southwestern Germany. We also investigated a possible difference in activity among different color morphs as coloration in mammals is often associated with concealment, for squirrels, however, such an effect could not be demonstrated so far. We found a diurnal activity for squirrels in all seasons with a bimodal activity pattern during spring, trimodal in summer and unimodal in fall and winter. Activity patterns did not differ between black and red color morphs. The activity of the squirrels showed only low to moderate overlaps with fox and marten, but there was still slight variation among seasons. Activity overlaps were higher in spring and summer, which coincides with breeding season. Our results suggest that predators might adjust their activity during squirrel breeding season to increase the chance of preying on their offspring. Squirrels in turn could benefit by minimizing the activity overlap during wintertime when they are highly visible to predators as trees are leaf-free or even snow might enhance the contrast between them and their background. Lastly, our results indicate that temporal niche portioning among red squirrel, red fox and martens might be rather fine scaled.

Long-term, medium-term and acute stress response of urban populations of Eurasian red squirrels affected by different levels of human disturbance.

Animals in urban areas often encounter novel and potentially stressful conditions. It is important to understand how wildlife cope with anthropogenic disturbance. To investigate this specific adaptation we live-trapped squirrels in two study sites in Warsaw: a forest reserve and an urban park and we estimated stress responses at three levels: long-term and medium-term stress (the level of stress hormones, i.e. cortisol and cortisone concentrations, in hair and feces) and acute reaction to human-induced stress (measured during handling with the aid of the three indices: breath rate, struggle rate, and vocalization). According to GLMM models no difference in the stress hormones level was found between the two populations. The only differences in cortisol concentrations clearly depended on the season, i.e. being higher in autumn and winter comparying to other seasons. There was no influence of sex, or reproductive status on stress hormones. Forest squirrels had significantly higher breath rates, suggesting they were more stressed by handling. There was no difference in the struggle rate between study areas, this index was mostly affected by season (i.e. being highest in winter). First-trapped squirrels vocalized less than during the subsequent trappings. Assumingly, during the first, and more stressful trapping, squirrels used 'freezing' and/or little vocalization, while during next captures they used alarm calls to warn conspecifics. Overall, we showed that the two squirrel populations differed only in terms of their breath rate. This suggests that they did not differ in medium-term and long-term stress in general, but they can differ in acute response to handling. This also suggests that both populations were similarly affected by environmental factors. The lack of clear effects may also be due to population heterogeneity. Thus, in order to assess the effects of anthropogenic stressors a broader range of indicators and diverse analytical methods, including behavioral analyses, should be employed.

Ancient Mycobacterium leprae genome reveals medieval English red squirrels as animal leprosy host

Leprosy, one of the oldest recorded diseases in human history, remains prevalent in Asia, Africa, and South America, with over 200,000 cases every year.1,2 Although ancient DNA (aDNA) approaches on the major causative agent, Mycobacterium leprae, have elucidated the disease's evolutionary history,3,4,5 the role of animal hosts and interspecies transmission in the past remains unexplored. Research has uncovered relationships between medieval strains isolated from archaeological human remains and modern animal hosts such as the red squirrel in England.6,7 However, the time frame, distribution, and direction of transmissions remains unknown. Here, we studied 25 human and 12 squirrel samples from two archaeological sites in Winchester, a medieval English city well known for its leprosarium and connections to the fur trade. We reconstructed four medieval M.leprae genomes, including one from a red squirrel, at a 2.2-fold average coverage. Our analysis revealed a phylogenetic placement of all strains on branch 3 as well as a close relationship between the squirrel strain and one newly reconstructed medieval human strain. In particular, the medieval squirrel strain is more closely related to some medieval human strains from Winchester than to modern red squirrel strains from England, indicating a yet-undetected circulation of M.leprae in non-human hosts in the Middle Ages. Our study represents the first One Health approach for M.leprae in archaeology, which is centered around a medieval animal host strain, and highlights the future capability of such approaches to understand the disease's zoonotic past and current potential.