Scientific Complementary Metal Oxide Semiconductor Research Articles

Near-infrared in vivo imaging system for dynamic visualization of lung-colonizing bacteria in mouse pneumonia.

Conventional animal models of infectious diseases have traditionally relied upon average assessments involving numerous individuals, meaning they do not directly reflect changes in the pathology of an individual. Moreover, in recent years, ethical concerns have resulted in the demand to reduce the number of animals used in such models. Although in vivo imaging offers an effective approach for longitudinally evaluating the pathogenesis of infectious diseases in individual animals, a standardized method has not yet been established. To our knowledge, this study is the first to develop a highly versatile in vivo pulmonary bacterial quantification system utilizing near-infrared luminescence, plasmid-mediated expression of firefly luciferase in bacteria, and a scientific complementary metal-oxide semiconductor camera. Our research holds promise as a useful tool for assessing the efficacy of therapeutic drugs and pathogenesis of infectious diseases.

Design of an Airborne Low-Light Imaging System Based on Multichannel Optical Butting

For the purpose of achieving long-range, high-resolution, and ultra-wide-swath airborne earth imaging at extremely low-light levels (0.01 Lux), a low-light imaging system built on multi-detector optical butting was researched. Having decomposed the system’s specifications and verified its low-light imaging capability, we proposed to employ an optical system with a large relative aperture and low distortion and achieve imaging through the field-of-view (FOV) butting facilitated by eight 1080P high-sensitivity scientific complementary metal-oxide semiconductor (SCMOS) detectors. This paper elaborates on the design concept of the mechanical configuration of the imaging system; studies the calculation method of the structural parameters of the reflection prism; provides mathematical expressions for geometric parameters, such as the length and width of the splicing prism; and designs in detail the splicing structure of six reflection prisms for eight-channel beam splitting. Based on the design and computational results, a high-resolution, wide-swath imaging system for an ambient illuminance of 0.01 Lux was developed. Exhibiting a ground sampling distance (GSD) of 0.5 m (at a flight height of 5 km), this low-light imaging system keeps the FOV overlap ratio between adjacent detectors below 3% and boasts an effective image resolution of 4222 × 3782. The results from flight testing revealed that the proposed imaging system is capable of generating wide-swath, high-contrast resolution imagery under airborne and low-light conditions. As such, the way the system is prepared can serve as a reference point for the development of airborne low-light imaging devices.

Secondary scintillation yield from GEM electron avalanches in - and --isobutane for CYGNO — Directional Dark Matter search with an optical TPC

CYGNO is an international collaboration with the aim of operating a ▪ optical time projection chamber (TPC) for directional Dark Matter (DM) searches and solar neutrino spectroscopy, to be deployed at the Laboratori Nazionali del Gran Sasso (LNGS). A ▪/▪ (60/40) mixture is used, along with a triple Gas Electron Multiplier (GEM) cascade to amplify the ionisation signal. The scintillation produced in the electron avalanches is read out using a scientific complementary metal–oxide–semiconductor (sCMOS) camera. This solution has proven to provide very high sensitivity to interactions in the few ▪ energy range. The inclusion of a hydrogen-based gas will offer an even lighter target, resulting in a more efficient energy transfer in a DM particle collision, and consequently, a lower detection threshold. Additionally, longer track lengths of light nuclear recoils are easier to detect with a clearer direction. However, the addition of such gas will contribute to quenching the scintillation, jeopardizing the TPC performance. In this work, we demonstrate the feasibility of adding 1% to 5% isobutane to the ▪/▪ (60/40) mixture by measuring the respective absolute scintillation yield output. The overall scintillation produced in the charge avalanches is not drastically suppressed by quenching due to the isobutane addition. The presence of Penning transfer from excited He atoms to isobutane molecules increases the number of electrons in the avalanches, partially compensating for the loss of scintillation due to quenching. For the highest applied GEM voltage, the total number of photons produced in the avalanche per ▪ deposited in the absorption region presents a decrease of only a factor of about three, from 2.30(20)×104 to 8.2(4)×103▪, as the isobutane content increases from 0 to 5%. The quantification of the visible component of the scintillation shows that isobutane quenches both visible and ultraviolet (UV) photons emitted by ▪/▪.

In-line Raman imaging of mixing by herringbone grooves in microfluidic channels.

The control over fluid flow achievable in microfluidic devices creates opportunities for applications in many fields. In simple microchannels, flow is purely laminar when one solvent is used, and hence, achieving reliable mixing is an important design consideration. Integration of structures, such as grooves, into the channels to act as static mixers is a commonly used approach. The mixing induced by these structures can be validated by determining concentration profiles in microfluidic channels following convergence of solvent streams from separate inlets. Spatially resolved characterisation is therefore necessary and requires in-line analysis methods. Here we report a line-focused illumination approach to provide operando, spatially resolved Raman spectra across the width of channels in the analysis of single- and multi-phase liquid systems and chemical reactions. A scientific complementary metal oxide semiconductor (sCMOS) sensor is used to overcome smearing encountered during spectral readout of images with CCD sensors. Isotopically labelled probes, in otherwise identical flow streams, show that z-confocality limits the spatial resolution and certainty as to the extent of mixing that can be achieved. These limitations are overcome using fast chemical reactions between reagents entering a microchannel in separate solvent streams. We show here that the progression of a chemical reaction, for which only the product is observable, is a powerful approach to determine the extent of mixing in a microchannel. Specifically resonance enhancement of Raman scattering from a product formed allows for determination of the true efficiency of mixing over the length and width of microchannels. Raman spectral images obtained by line-focused illumination show onset of mixing by observing the product of reagents entering from the separate inlets. Mixing is initially off-centre and immediately before the apex of the first groove of the static mixer, and then evolves along the entire width of the channel after a full cycle of grooves.

An Aluminum-coated sCMOS Sensor for X-Ray Astronomy

In recent years, tremendous progress has been made on scientific Complementary Metal Oxide Semiconductor (sCMOS) sensors, making them a promising device for future space X-ray missions. We have customized a large-format sCMOS sensor, G1516BI, dedicated for X-ray applications. In this work, a 200 nm thick aluminum layer is successfully sputtered on the surface of this sensor. This Al-coated sensor, named EP4K, shows consistent performance with the uncoated version. The readout noise of the EP4K sensor is around 2.5 e− and the dark current is less than 0.01 e− pixel−1 s−1 at −30°C. The maximum frame rate is 20 Hz in the current design. The ratio of single pixel events of the sensor is 45.0%. The energy resolution can reach 153.2 eV at 4.51 keV and 174.2 eV at 5.90 keV at −30°C. The optical transmittance of the aluminum layer is approximately 10−8 to 10−10 for optical lights from 365 to 880 nm, corresponding to an effective aluminum thickness of around 140 to 160 nm. The good X-ray performance and low optical transmittance of this Al-coated sCMOS sensor make it a good choice for space X-ray missions. The Lobster Eye Imager for Astronomy, which has been working in orbit for about one year, is equipped with four EP4K sensors. Furthermore, 48 EP4K sensors are used on the Wide-field X-ray Telescope on the Einstein Probe satellite, which will be launched at the end of 2023.

Optimal sparsity allows reliable system-aware restoration of fluorescence microscopy images.

Fluorescence microscopy is one of the most indispensable and informative driving forces for biological research, but the extent of observable biological phenomena is essentially determined by the content and quality of the acquired images. To address the different noise sources that can degrade these images, we introduce an algorithm for multiscale image restoration through optimally sparse representation (MIRO). MIRO is a deterministic framework that models the acquisition process and uses pixelwise noise correction to improve image quality. Our study demonstrates that this approach yields a remarkable restoration of the fluorescence signal for a wide range of microscopy systems, regardless of the detector used (e.g., electron-multiplying charge-coupled device, scientific complementary metal-oxide semiconductor, or photomultiplier tube). MIRO improves current imaging capabilities, enabling fast, low-light optical microscopy, accurate image analysis, and robust machine intelligence when integrated with deep neural networks. This expands the range of biological knowledge that can be obtained from fluorescence microscopy.

Range-Gated LIDAR Utilizing a LiNbO3 (LN) Crystal as an Optical Switch

In this paper, a range-gated LIDAR system utilizing an LN crystal as the electro-optical switch and a SCMOS (scientific complementary metal oxide semiconductor) imaging device is designed. To achieve range-gated operations, we utilize two polarizers and an LN (LiNbO3) crystal to form an electro-optical switch. The optical switch is realized by applying a pulse voltage at both ends of the crystal due to the crystal’s conoscopic interference effect and electro-optical effect. The advantage of this system is that low-bandwidth detectors, such as a CMOS and a CCD (charge-coupled device), can be used to replace conventional high-bandwidth detectors, such as an ICCD (intensified charge-coupled device), and it displays better imaging performance under specific conditions at the same time. However, after using an electro-optical crystal as an optical switch, a new inhomogeneity error will be introduced due to the conoscopic interference effect of the electro-optical crystal, resulting in a range error for the LIDAR system. To reduce the influence of inhomogeneity error on the system, this paper analyzes the sources of inhomogeneity error caused by the electro-optical crystal and calculates the crystal’s inhomogeneity mathematical expression. A compensation method is proposed based on the above inhomogeneity mathematical expression. An experimental LIDAR system is constructed in this paper to verify the validity of the compensation method. The experimental results of the range-gated LIDAR system show that in a specific field of view (2.6 mrad), the LIDAR system has good imaging performance; its ranging standard deviation is 3.86 cm and further decreases to 2.86 cm after compensation, which verifies the accuracy of the compensation method.

Toward High‐Throughput Single‐Spin Optically Detected Magnetic Resonance Spectroscopy with Spatially Programmable Laser Illumination

AbstractThe single nitrogen‐vacancy (NV) centers in diamond are shown as a quantum sensor with broad applications in nanoscale sensing of magnetic field, electric field, temperature, and strain. However, the basic technique, namely, optically detected magnetic resonance to manipulate and measure single NV centers needs to be highly sped up for broad and practical applications. Here, this work shows a parallel optically detected magnetic resonance (ODMR) platform of single NV centers including the programmable excitation laser spots generated by a digital micromirror device, a four‐channel uniform microwave delivery, and the fluorescence detector based on scientific complementary metal–oxide–semiconductor camera. In the viewing field of 26 µm, hundreds of distinguishable fluorescent spots are addressed and 413 NV center spots are recognized. The magnetic resonance spectrum, Rabi oscillation, and spin echo of each NV center spot are measured in parallel. As a result, a preliminary speedup of ≈20‐fold is achieved compared to the confocal‐based ODMR and can be further extended to thousands of folds after updating the digital micromirror device and camera.

High-speed and wide-field nanoscale table-top ptychographic EUV imaging and beam characterization with a sCMOS detector.

We present high-speed and wide-field EUV ptychography at 13.5 nm wavelength using a table-top high-order harmonic source. Compared to previous measurements, the total measurement time is significantly reduced by up to a factor of five by employing a scientific complementary metal oxide semiconductor (sCMOS) detector that is combined with an optimized multilayer mirror configuration. The fast frame rate of the sCMOS detector enables wide-field imaging with a field of view of 100 µm × 100 µm with an imaging speed of 4.6 Mpix/h. Furthermore, fast EUV wavefront characterization is employed using a combination of the sCMOS detector with orthogonal probe relaxation.

Improving the X-Ray Energy Resolution of a Scientific CMOS Detector by Pixel-level Gain Correction

Scientific Complementary Metal Oxide Semiconductor (sCMOS) sensors are finding increasingly more applications in astronomical observations, thanks to their advantages over charge-coupled devices such as a higher readout frame rate, higher radiation tolerance, and higher working temperature. In this work, we investigate the performance at the individual pixel level of a large-format sCMOS sensor, GSENSE1516BSI, which has 4096 × 4096 pixels, each of 15 μm in size. To achieve this, three areas on the sCMOS sensor, each consisting of 99 × 99 pixels, are chosen for the experiment. The readout noise, conversion gain and energy resolutions of the individual pixels in these areas are measured from a large number (more than 25,000) of X-ray events accumulated for each of the pixels through long time exposures. The energy resolution of these pixels can reach 140 eV at 6.4 keV at room temperature and shows a significant positive correlation with the readout noise. The accurate gain can also be derived individually for each of the pixels from its X-ray spectrum obtained. Variations of the gain values are found at a level of 0.56% statistically among the 30 thousand pixels in the areas studied. With the gain of each pixel determined accurately, a precise gain correction is performed pixel by pixel in these areas, in contrast to the standardized ensemble gain used in the conventional method. In this way, we could almost completely eliminate the degradation of energy resolutions caused by gain variations among pixels. As a result, the energy resolution at room temperature can be significantly improved to 124.6 eV at 4.5 keV and 140.7 eV at 6.4 keV. This pixel-by-pixel gain correction method can be applied to all kinds of CMOS sensors, and is expected to find interesting applications in X-ray spectroscopic observations in the future.

Compact high repetition rate Thomson parabola ion spectrometer.

We present the development of a compact Thomson parabola ion spectrometer capable of characterizing the energy spectra of various ion species of multi-MeV ion beams from >1020W/cm2 laser produced plasmas at rates commensurate with the highest available from any of the current and near-future PW-class laser facilities. This diagnostic makes use of a polyvinyl toluene based fast plastic scintillator (EJ-260), and the emitted light is collected using an optical imaging system coupled to a thermoelectrically cooled scientific complementary metal-oxide-semiconductor camera. This offers a robust solution for data acquisition at a high repetition rate, while avoiding the added complications and nonlinearities of micro-channel plate based systems. Different ion energy ranges can be probed using a modular magnet setup, a variable electric field, and a varying drift-distance. We have demonstrated operation and data collection with this system at up to 0.2Hz from plasmas created by irradiating a solid target, limited only by the targeting system. With the appropriate software, on-the-fly ion spectral analysis will be possible, enabling real-time experimental control at multi-Hz repetition rates.

Rapid nanometer-precision autocorrelator.

The precise measurement of a target depth has applications in biophysics and nanophysics, and non-linear optical methods are sensitive to intensity changes on very small length scales. By exploiting the high sensitivity of an autocorrelator's dependency on path length, we propose a technique that achieves ≈30 nm depth precision for each pixel in 30 seconds. Our method images up-converted pulses from a non-linear crystal using a sCMOS (scientific Complementary Metal-Oxide-Semiconductor) camera and converts the intensity recorded by each pixel to a delay. By utilising statistical estimation theory and using the data from a set of 32×32 pixels, the standard error (SE) of the detected delay falls below 1 nm after 30 seconds of measurement. Numerical simulations show that this result is extremely close to what can be achieved with a shot-noise-limited source and is consistent with the precision that can be achieved with a sCMOS camera.

X-ray performance of a small pixel size sCMOS sensor and the effect of depletion depth

In recent years, scientific Complementary Metal Oxide Semiconductor (sCMOS) devices have been increasingly applied in X-ray detection, thanks to their attributes such as high frame rate, low dark current, high radiation tolerance and low readout noise. We tested the basic performance of a backside-illuminated (BSI) sCMOS sensor, which has a small pixel size of 6.5 μm × 6.5 μm. At a temperature of -20°C, The readout noise is 1.6 e-, the dark current is 0.5 e-/pixel/s, and the energy resolution reaches 204.6 eV for single-pixel events. The effect of depletion depth on the sensor's performance was also examined, using three versions of the sensors with different deletion depths. We found that the sensor with a deeper depletion region can achieve a better energy resolution for events of all types of pixel splitting patterns, and has a higher efficiency in collecting photoelectrons produced by X-ray photons. We further study the effect of depletion depth on charge diffusion with a center-of-gravity (CG) model. Based on this work, a highly depleted sCMOS is recommended for applications of soft X-ray spectroscopy.

Temperature measurement and simulation analysis of heaterless hollow cathode during start-up process

Monochromatic radiation thermometry is used to quantify temperature distribution during the start-up process for a heaterless hollow cathode. A transparent cathode is designed to facilitate the transmission of thermally and spontaneously radiated photons from the interior of the structure and their reception by the detection equipment. The relative radiation intensities can be obtained by the developed measurement equipment, which consists of an scientific complementary metal oxide semiconductor camera and a 780 nm narrow-band filter, and then transformed into temperature distributions calibrated by a two-color pyrometer. The current and voltage characteristics of the anode and keeper and plasma image captured by the high-speed camera are used to analyze the thermal evolution mechanism. A 2D extended fluid model coupling with a thermal model is also developed and used to help clarify the thermal deposition variation at different locations. These results provide further support for the hypothesis that thermal deposition of ions and electrons, thermal conduction, and thermal radiation all affect the rate of change in temperature of various components.

Compact laboratory-based X-ray microscope enabling nondestructive 3D structure acquisition of mouse nephron with high speed and better user accessibility.

X-ray microscopes adopting computed tomography enable nondestructive 3D visualization of biological specimens at micron-level resolution without conventional 2D serial sectioning that is a destructive/laborious method and is routinely used for analyzing renal biopsy in clinical diagnosis of kidney diseases. Here we applied a compact commercial system of laboratory-based X-ray microscope to observe a resin-embedded osmium-stained 1-mm strip of a mouse kidney piece as a model of renal biopsy, toward a more efficient diagnosis of kidney diseases. A reconstructed computed tomography image from several hours of data collection using CCD detector allowed us to unambiguously segment a single nephron connected to a renal corpuscle, which was consistent with previous reports using serial sectioning. Histogram analysis on the segmented nephron confirmed that the proximal and distal tubules were distinguishable on the basis of their X-ray opacities. A 3D rendering model of the segmented nephron visualized a convoluted structure of renal tubules neighboring the renal corpuscle and a branched structure of efferent arterioles. Furthermore, another data collection using scientific complementary metal-oxide semiconductor detector with a much shorter data acquisition time of 15 min provided similar results from the same samples. These results suggest a potential application of the compact laboratory-based X-ray microscope to analyze mouse renal biopsy.

Microscope alignment using real-time Imaging FCS

Modern electron-multiplying charge-coupled device (EMCCD) and scientific complementary metal-oxide semiconductor (sCMOS) cameras read out fluorescence data with single-molecule sensitivity at thousands of frames per second. Exploiting these capabilities in full requires data evaluation in real time. The direct camera-read-out tool presented here allows access to the data while the camera is recording. This provides simplified and accurate alignment procedures for total internal reflection fluorescence microscopy (TIRFM) and single-plane illumination microscopy (SPIM), and simplifies and accelerates fluorescence experiments. The tool handles a range of widely used EMCCD and sCMOS cameras and uses imaging fluorescence correlation spectroscopy for its evaluation. It is easily extendable to other camera models and other techniques and is a base for automated TIRFM and SPIM data acquisition.

X-Ray Performance of a Customized Large-format Scientific CMOS Detector

In recent years, the performance of Scientific Complementary Metal Oxide Semiconductor (sCMOS) sensors has been improved significantly. Compared with charge-coupled Device sensors, sCMOS sensors have various advantages, making them potentially better devices for optical and X-ray detection, especially in time-domain astronomy. After a series of tests of sCMOS sensors, we proposed a new dedicated high-speed, large-format X-ray detector in 2016 cooperating with Gpixel Inc. This new sCMOS sensor has a physical size of 6 cm × 6 cm, with an array of 4096 × 4096 pixels and a pixel size of 15 μm. The frame rate is 20.1 fps under current condition and can be boosted to a maximum value around 100 fps. The epitaxial thickness is increased to 10 μm compared to the previous sCMOS product. We show the results of its first taped-out product in this work. The dark current of this sCMOS is lower than 10 e− pixel−1 s−1 at 20°C, and lower than 0.02 e− pixel−1 s−1 at −30°C. The fixed pattern noise and the readout noise are lower than 5 e− in high-gain situation and show a small increase at low temperature. The energy resolution reaches 180.1 eV (3.1%) at 5.90 keV for single-pixel events and 212.3 eV (3.6%) for all split events. The continuous X-ray spectrum measurement shows that this sensor is able to response to X-ray photons from 500 eV to 37 keV. The excellent performance, as demonstrated from these test results, makes sCMOS sensor an ideal detector for X-ray imaging and spectroscopic application.

Ptychography at the carbon K-edge

Ptychography is a coherent diffraction imaging technique that measures diffraction patterns at many overlapping points on a sample and then uses an algorithm to reconstruct amplitude and phase images of the object and probe. Here, we report imaging, spectroscopy and linear dichroism ptychographic measurements at the carbon K-edge. This progress was achieved with a new generation of scientific Complementary Metal Oxide Semiconductor (sCMOS) X-ray cameras with an uncoated image sensor which has fast image transfer and high quantum efficiency at the carbon K-edge. Reconstructed amplitude and phase contrast images, C 1s spectral stacks, and X-ray linear dichroism of carbon nanotubes at the carbon K-edge were measured with ptychography. Ptychography and conventional Scanning Transmission X-ray Microscopy (STXM) are compared using results acquired from the same area. Relative to STXM, ptychography provides both improved spatial resolution and improved image quality. We used defocus ptychography, with an X-ray beam spot size of 1.0 micron, in order to reduce radiation damage and carbon deposition. Comparable spatial resolution was achieved to that of ptychography performed with a focused beam. Ptychography at the carbon K-edge offers unique opportunities to perform high resolution spectromicroscopy on organic materials important in medicine, biology, environmental science and energy materials.

Single-shot experiments at the soft X-FEL FERMI using a back-side-illuminated scientific CMOS detector.

The latest Complementary Metal Oxide Semiconductor (CMOS) 2D sensors now rival the performance of state-of-the-art photon detectors for optical application, combining a high-frame-rate speed with a wide dynamic range. While the advent of high-repetition-rate hard X-ray free-electron lasers (FELs) has boosted the development of complex large-area fast CCD detectors in the extreme ultraviolet (EUV) and soft X-ray domains, scientists lacked such high-performance 2D detectors, principally due to the very poor efficiency limited by the sensor processing. Recently, a new generation of large back-side-illuminated scientific CMOS sensors (CMOS-BSI) has been developed and commercialized. One of these cost-efficient and competitive sensors, the GSENSE400BSI, has been implemented and characterized, and the proof of concept has been carried out at a synchrotron or laser-based X-ray source. In this article, we explore the feasibility of single-shot ultra-fast experiments at FEL sources operating in theEUV/soft X-ray regime with an AXIS-SXR camera equipped with the GSENSE400BSI-TVISB sensor. We illustrate the detector capabilities by performing a soft X-ray magnetic scattering experiment at the DiProi end-station of the FERMI FEL. These measurements show the possibility of integrating this camera for collecting single-shot images at the 50 Hz operation mode of FERMI with a cropped image size of 700× 700 pixels. The efficiency of the sensor at a working photon energy of 58 eV and the linearity over the large FEL intensity have been verified. Moreover, on-the-fly time-resolved single-shot X-ray resonant magnetic scattering imaging from prototype Co/Pt multilayer films has been carried out with a time collection gain of 30 compared to the classical start-and-stop acquisition method performed with the conventional CCD-BSI detector available at the end-station.

A Novel Technique for Full-Field Deformation and Temperature Measurement by Ultraviolet Imaging: Experimental Design and Preliminary Results

Synchronous measurement of full-field temperature and deformation at high temperature especially more than 1273 K is of much significance especially for part applications of turbine structures and materials. Non-contact optical methods attract more and more attention, however, current methods all face different challenges, such as strong light reflection on the surface of the specimen, disturbing radiation from environment, complex equipment setup, limited measured temperature not higher than 900 ℃ and so on. In this work, we develop an innovative technique to overcome some current problems. The measurement system employing an ultraviolet (UV) imaging system is composed of a scientific complementary metal oxide semiconductor (sCMOS) camera, a lens and a UV bandpass filter. The UV bandpass filter was used for thermal radiation elimination to acquire high quality images at elevated temperatures for deformation field calculation suitable for digital image correlation (DIC) method. The UV sensitive sCMOS camera without using active illumination was employed to collect enough UV radiation energy and eliminate the interference of the external ambient light, which is applicable for high accuracy temperature field measurement. Our system can realize the synchronous capture of image and temperature acquisition with passive UV imaging system at temperature not lower than 1473K. The feasibility of the method was verified through heating molybdenum (Mo) and Ni-based superalloy IC21 materials. The temperature fields of Mo measured by the established imaging system up to 1835 K with error less than 0.25% showed the effectiveness for temperature measurement. The estimated deformation and temperature field of Ni-based superalloy IC21 up to 1473 K with measured temperature error less than 0.5% demonstrated well the great potential of the UV imaging system in simultaneous measurement of temperature and deformation fields at elevated temperatures.