Scanning Tunneling Microscopy Break Junction Research Articles

Regulating the Single-Molecule Conductance of Corroles by the Substituents on the B-Site

Although the tetrapyrrolic macrocycle system provides a promising platform for building molecular devices, investigating the relationship between the conductance and the substituents is still a challenge. Here, three A2B type corroles with the substituents exhibiting electron-withdrawing and electron-donating effects on B-site are prepared. The single-molecule conductance results via the scanning tunneling microscope break junction (STM-BJ) technique demonstrate that the single-molecule conductance of corroles is suppressed by the electron-withdrawing substituent while it is enhanced by the electron-donating substituent, which is attributed to the change of the energy gap between the HOMO and LUMO.

Controlling Charge Transport in Molecular Wires through Transannular π-π Interaction.

This paper describes the influence of the transannular π-π interaction in controlling the carrier transport in molecular wires by employing the STM break junction technique. Five pentaphenylene-based molecular wires that contained [2.2]paracyclophane-1,9-dienes (PCD) as the building block were prepared as model compounds. Functional substituents with different electronic properties, ranging from strong acceptors to strong donors, were attached to the top parallel aromatic ring and used as a gate. It was found that the carrier transport features of these molecular wires, such as single-molecule conductance and a charge-tunneling barrier, can be systematically controlled through the transannular π-π interaction.

Structure Identification for Force-Induced Reaction Using Single-Molecule Conductance Measurement

Structure Identification for Force-Induced Reaction Using Single-Molecule Conductance Measurement

A metal alkynyl molecular wire with PN ligands: Synthesis, isomerization, physical properties and single-molecule conductance

As new candidates for organometallic molecular wires, we designed a ruthenium trans-di(alkynyl) molecular wire 1H, trans-Ru(PN)2(C≡CC≡C-H)2, with the two mixed phosphine-pyridine supporting ligands (PN: 2-diphenylphosphinomethyl-6-methylpyridine). While two stereo-isomers with the syn and anti configurations were possible, the syn isomers of triisopropylsilylbutadiynyl precursors syn-1TIPS and syn-1H were prepared in direct and stereo-selective manners. Electrochemical analysis of syn-1TIPS revealed a virtually reversible redox wave with the potential cathodically shifted compared to that of the bis(diphosphine) analogue 2TMS, trans-Ru(dppe)2(C≡CC≡C-SiMe3)2. The density functional theoretical (DFT) study supports the similarity of the electronic structures of 1 and 2 with the HOMOs being close to the Fermi energy level of gold electrodes. STM-break junction measurements of Au-syn-1-Au (Au: gold electrode) revealed high single-molecule conductance (1.9 × 10–2G0), which is comparable to that of Au-2-Au. Calculations on the basis of the DFT-non equilibrium Green’s function method also support the experimental results. Notably, the molecular junction Au- syn-1-Au can be formed from syn-1H through C-H activation and formation of Au-C bonds without any pre-functionalization in contrast to the bis(diphosphine) analogue 2H, which requires terminal gold functionalization.

In-situ label-free single-molecule dynamic detection of thermal-reversible reactions

Direct monitoring of chemical reactions under external thermal control at the single-molecule scale remains highly challenging. Herein we report the first example of in-situ label-free single-molecule detection of a thermal-reversible Diels-Alder (DA) reactions using the scanning tunneling microscopy break junction (STM-BJ) technique equipped with a thermocouple mounted under the substrate with feedback control. The initial and final conductance states in single-molecule junctions based on the reaction can be reversibly switched in-situ between two different temperature levels. Furthermore, quantitative statistical analysis of the single-molecule reaction dynamics reveals that orientated external electric fields can selectively accelerate the forward DA reaction more than three times while having no impact on the reverse reaction. This finding emphasizes the potential of electric fields in selectively manipulating chemical reactions. The combined theoretical calculations suggest that the applied electric fields stabilize the dipole of the transition state and therefore reduce the energy barrier of the forward reaction. The integration of reversible reactions into nanocircuits not only provides an efficient strategy to manipulate chemical reactions but also offers new opportunities for designing functional molecular-scale devices such as transistors and switches.

Synthesis and crystal structures of rhodium acetate paddle‐wheel complexes with anchor group‐functionalised and hydrogen bond‐supported axial ligands

AbstractWe report the synthesis and X‐ray structures of four Rh2(OAc)4(LAx)2 (OAc=acetate, CH3COO−) paddle‐wheel complexes (C1−C4) with methylthio‐modified axial ligands LAx derived from benzamidine (L1), anilinopyrimidine (L2) or isothiourea (L3, L4) that are capable of forming N−H⋅⋅⋅O hydrogen bonds to the equatorially bridging acetate ligands. This was done with the aim to suppress dissociation of the axial ligands and to make the complexes amenable to single‐molecule conductance measurements in a scanning tunneling microscope break‐junction (STM‐BJ) setup. The characteristic spectroscopic features (NMR, IR, vis), crystal structures, the hydrogen‐bonding motifs and a DFT‐based screening of their frontier molecular orbitals are presented. Our calculations suggest that hydrogen‐bonding stabilises axial ligand binding by 15 kJ/mol to 30 kJ/mol and that the HOMO of the rhodium paddle‐wheels is closer to the Au work function than the LUMO, so that the rhodium paddle‐wheels are expected to constitute hole conductors.

Single-Molecule Tunneling Sensors for Nitrobenzene Explosives.

The tunneling current through the single-molecule junctions principally offers the ultimate solution for chemical and biochemical sensing via the interactions between probes and target analytes at the single-molecule level. However, it remains unexplored to achieve the sensitive and selective detection of targeted analytes using single-molecule junction techniques due to the challenge in quantitative evaluation of sensing sensitivity and selectivity. Herein, we demonstrate a single-molecule tunneling sensor for the highly sensitive and selective detection of nitrobenzene explosives using scanning tunneling microscope break junction (STM-BJ). Taking advantage of π-π stacking interactions between the molecular probes and nitrobenzene explosives, we use a spectral clustering algorithm to assign the signal of probes and π-stacked probes for sensitively detecting the targeted analytes and the distinguishable conductance change of probes when interacting with different nitroaromatic explosive compounds for selective detection. We find that pronounced conductance changes up to 0.8 orders of magnitude when the probes interact with TNT. Also, we obtain a sensitivity of up to ∼10 pM for TNT and high sensitivity for eight TNT analogues. Combined with theoretical calculations, we discover that the harness of the destructive quantum interference of the probe M1OH after interacting with TNT leads to high selectivity in sensing with TNT. Our work demonstrates the great potential of the single-molecule tunneling current for environmental sensing molecules with high selectivity and sensitivity.

σ-dominated charge transport in sub-nanometer molecular junctions

Quantum tunneling conductance of molecular junctions originates from the charge transport through the π-orbitals (π-transport) and the σ-orbitals (σ-transport) of the molecules, but the σ-transport can not be observed due to the more rapid decay of the tunneling conductance in the σ-system compared to that in the π-system. Here, we demonstrate that dominant σ-transport can be observed in π-conjugated molecular junctions at the sub-nanometer scale using the scanning tunneling microscope break junction technique (STM-BJ). We have found that the conductance of meta-connected picolinic acid, which mainly occurs by σ-transport, is ∼35 times higher than that of its para-isomer, which is entirely different from what is expected from π-transport through these systems. Flicker noise analysis reveals that the transport through the meta-connection exhibits more through-bond transport than the para-counterpart and density functional theory (DFT) shows that the σ-system provides the dominant transport path. These results reveal that the σ-electrons, rather than the π-electrons, can dominate charge transport through conjugated molecular junctions at the sub-nanometer scale, and this provides a new avenue toward the future miniaturization of molecular devices and materials.

Studying single molecule electrochemistry with scanning tunneling microscope break-junction technique

The fundamental principle of molecular electronics is to comprehend electrical properties of single molecules connected between two probe electrodes. In recent years, substantial advances in this field have been made to underpin experimental and theoretical understanding of single molecule electrochemistry. By using scanning tunneling microscope (STM) break-junction technique, the switching events of electrical current from single molecule bridge tuning by electrochemical gating are investigated to uncover the relationship between electrochemical electron transfer and charge transport processes in chemical and biological molecule junctions. In this short review, we outline the latest works of single molecule electrochemistry studied with STM break-junction technique from Nongjian Tao's group, and share the insights on the opportunities and challenges for future research.

Recent Advances in Single-Molecule Sensors Based on STM Break Junction Measurements

Single-molecule recognition and detection with the highest resolution measurement has been one of the ultimate goals in science and engineering. Break junction techniques, originally developed to measure single-molecule conductance, recently have also been proven to have the capacity for the label-free exploration of single-molecule physics and chemistry, which paves a new way for single-molecule detection with high temporal resolution. In this review, we outline the primary advances and potential of the STM break junction technique for qualitative identification and quantitative detection at a single-molecule level. The principles of operation of these single-molecule electrical sensing mainly in three regimes, ion, environmental pH and genetic material detection, are summarized. It clearly proves that the single-molecule electrical measurements with break junction techniques show a promising perspective for designing a simple, label-free and nondestructive electrical sensor with ultrahigh sensitivity and excellent selectivity.

Photoconductance from the Bent-to-Planar Photocycle between Ground and Excited States in Single-Molecule Junctions.

Single-molecule conductance measurements for 9,14-diphenyl-9,14-dihydrodibenzo[a,c]phenazine (DPAC) may offer unique insight into the bent-to-planar photocycle between the ground and excited states. Herein, we employ DPAC derivative DPAC-SMe as the molecular prototype to fabricate single-molecule junctions using the scanning tunneling microscope break junction technique and explore photoconductance dependence on the excited-state structural/electronic changes. We find up to ∼200% conductance enhancement of DPAC-SMe under continuous 340 nm light irradiation than that without irradiation, while photoconductance disappears in the case where structural evolution of the DPAC-SMe is halted through macrocyclization. The in situ conductance modulation as pulsed 340 nm light irradiation is monitored in the DPAC-SMe-based junctions alone, suggesting that the photoconductance of DPAC-SMe stems from photoinduced intramolecular planarization. Theoretical calculations reveal that the photoinduced structural evolution brings about a significant redistribution of the electron cloud density, which leads to the appearance of Fano resonance, resulting in enhanced conductance through the DPAC-SMe-fabricated junctions. This work provides evidence of bent-to-planar photocycle-induced conductance differences at the single-molecule level, offering a tailored approach for tuning the charge transport characteristics of organic photoelectronic devices.

Dual Modulation of Single Molecule Conductance via Tuning Side Chains and Electric Field with Conjugated Molecules Entailing Intramolecular O•••S Interactions.

Herein, single‐molecule conductance studies of TBT1‐TBT6 which entails 1,4‐dithienylbenzene as the backbone and —SMe groups as the anchoring units, with the scanning tunneling microscope break junction (STM‐BJ) technique, are reported. The molecular conductance of TBT1 with intramolecular O•••S noncovalent interactions is enhanced by about one order of magnitude in comparison to their analogue TBT2 (which contains alkyl instead of alkoxy chains). By replacing the methoxy groups in TBT1 with extending alkoxy chains in TBT3, TBT4, and TBT5, the molecular backbones become twisted and as a consequence the single‐molecule conductance decreases gradually, showing that the intramolecular O•••S noncovalent interaction is influenced by the structural features of alkoxy chains. More importantly, the single‐molecule conductance of TBT3, TBT4, and TBT5 can be boosted by increasing the electric field applied to the molecular junctions. Remarkably, the conductance of TBT3, TBT4, and TBT5 can be reversibly modulated due to the conformational changes between twisted and planar ones by varying the electric field. These results demonstrate that molecules with intramolecular O•••S noncovalent interactions have the potential for in situ control of the electrical properties of molecular‐scale devices.

Transport Modulation Through Electronegativity Gating in Multiple Nitrogenous Circuits.

Investigating the correlations of electron transport between multiple channels shows vital promises for the design of molecule-scale circuits with logic operations. To control the electron transport through multiple channels, the modulation of electronegativity shows an effective frontier orbit control method with high universality to explore the interactions between transport channels. Here, two series of compounds with a single nitrogenous conductive channel (Sg) and dual-channels (Db) are designed to explore the influence of electronegativity on electron tunneling transport. Single-molecule conductance measured via the scanning tunneling microscope break junction technique (STM-BJ) reveals that the conductance of Db series is significantly suppressed as the electronegativity of nitrogen becomes negative, while the suppression on Sg is less obvious. Theoretical calculations confirm that the effect of electronegativity extends to a dispersive range of molecular frameworks owing to the delocalized orbital distribution from the dual-channel structure, resulting in a more significant conductance suppression effect than that on the single-channel. This study provides the experimental and theoretical potentials of electronegativity gating for molecular circuits.

Efficient Intermolecular Charge Transport in π-Stacked Pyridinium Dimers Using Cucurbit[8]uril Supramolecular Complexes.

Intermolecular charge transport through π-conjugated molecules plays an essential role in biochemical redox processes and energy storage applications. In this work, we observe highly efficient intermolecular charge transport upon dimerization of pyridinium molecules in the cavity of a synthetic host (cucurbit[8]uril, CB[8]). Stable, homoternary complexes are formed between pyridinium molecules and CB[8] with high binding affinity, resulting in an offset stacked geometry of two pyridiniums inside the host cavity. The charge transport properties of free and dimerized pyridiniums are characterized using a scanning tunneling microscope-break junction (STM-BJ) technique. Our results show that π-stacked pyridinium dimers exhibit comparable molecular conductance to isolated, single pyridinium molecules, despite a longer transport pathway and a switch from intra- to intermolecular charge transport. Control experiments using a CB[8] homologue (cucurbit[7]uril, CB[7]) show that the synthetic host primarily serves to facilitate dimer formation and plays a minimal role on molecular conductance. Molecular modeling using density functional theory (DFT) reveals that pyridinium molecules are planarized upon dimerization inside the host cavity, which facilitates charge transport. In addition, the π-stacked pyridinium dimers possess large intermolecular LUMO-LUMO couplings, leading to enhanced intermolecular charge transport. Overall, this work demonstrates that supramolecular assembly can be used to control intermolecular charge transport in π-stacked molecules.

Visualizing an Electrochemically Induced Radical Cation of Bipyridine at Au(111)/Ionic Liquid Interfaces toward a Single-Molecule Switch.

Room-temperature ionic liquids (RTILs) emerged as ideal solvents, and bipyridine as one of the most used ligands have been widely employed in surface science, catalysis, and molecular electronics. Herein, in situ shell-isolated nanoparticle-enhanced Raman spectroscopy (SHINERS) and STM break junction (STM-BJ) technique has been employed to probe the electrochemical process of bipyridine at Au(111)/IL interfaces. It is interestingly found that these molecules undertake a redox process with a pair of well-defined reversible peaks in cyclic voltammograms (CVs). The spectroscopic evidence shows a radical cation generated with rising new Raman peaks related to parallel CC stretching of a positively charged pyridyl ring. Furthermore, these electrochemically charged bipyridine is also confirmed by electrochemical STM-BJ at the single-molecule level, which displays a binary conductance switch ratio of about 400% at the redox potentials. This present work offers a molecular-level insight into the pyridine-mediated reaction process and electron transport in RTILs.

Influence of a Coordinated Metal Center on Charge Transport through a Series of Porphyrin Molecular Junctions

Porphyrin-based molecular wires as promising candidates for nanoelectronic devices have attracted much attention. Therefore, it is fundamentally important to investigate structure–electrical properties involving such molecules. Herein, a series of 5-ethynyl-2,3-dihydrobenzo[b]thiophene-substituted free-metal porphyrins and metalloporphyrins have been synthesized. Rigid, structurally well-defined, and highly conjugated porphyrin-based molecular wires offer a good platform to explore the impact of coordinated metal ions (Cu, Fe, and Zn) on charge transport at a single-molecule scale. Using the scanning tunneling microscope break-junction (STM-BJ) technique, it is found that single-molecule conductance can change by nearly 500% when the central coordinated metal ions are changed. The theoretically simulated energy-dependent transmission spectra reveal that the spin state of FeTPP can tune charge transport at E = EF, and transmission coefficient T(E) is well correlated with the experimental observation. Our work proves a pronounced metal ion effect on charge transport through a porphyrin plane, providing guidance to design high-performance porphyrin-based nanodevices.

A one-pot synthesis of oligo(arylene–ethynylene)-molecular wires and their use in the further verification of molecular circuit laws

A convenient two-step, one-pot synthesis of oligo(arylene–ethynylene) (OAE) type molecular wires in yields of up to 70% via in situ desilylation of protected bis(alkynes) Me3SiC≡CArC≡CSiMe3 (Ar = 2,5-thienyl, 1,4-naphthylene, 9,10-anthrylene) and subsequent Sonogashira cross-coupling with S-(4-iodophenyl) ethanethiolate, 4-iodothioanisole, or 5-bromo-3,3-dimethyl-2,3-dihydrobenzo[b]thiophene is described. The in situ desilylation avoids the manipulation of the sensitive terminal dialkynes (HC≡CArC≡CH), whilst the general approach presented has some advantages over alternative synthetic strategies based on coupling of aryl dihalides (XArX) by avoiding the multi-step preparation and purification of the terminal alkynes S-(4-ethynylphenyl) ethanethiolate, 4-ethynylthioanisole and 5-ethynyl 3,3-dimethyl-2,3-dihydrobenzo[b]thiophene. The molecular conductance of the resulting thiolate or thioether functionalised OAE molecular wires has been determined using scanning tunneling microscope break junction (STM-BJ) methods. The trends in molecular conductance do not track simply with the degree of aromaticity of the molecular core despite the rather similar molecular lengths. Rather, the STM-BJ data are better correlated with the nature of the anchor group, highlighting the important role of electrode–molecule coupling on electron transport in a molecular junction. The experimental conductance data are in good agreement with recently described quantum circuit rules, further highlighting the potential for these relationships to be used as predictive tools in molecular electronics research.

Substituent-mediated quantum interference toward a giant single-molecule conductance variation

Quantum interference (QI) in single molecular junctions shows a promising perspective for realizing conceptual nanoelectronics. However, controlling and modulating the QI remains a big challenge. Herein, two-type substituents at different positions of meta-linked benzene, namely electron-donating methoxy (–OMe) and electron-withdrawing nitryl (–NO2), are designed and synthesized to investigate the substituent effects on QI. The calculated transmission coefficients T(E) indicates that –OMe and –NO2 could remove the antiresonance and destructive quantum interference (DQI)-induced transmission dips at position 2. –OMe could raise the antiresonance energy at position 4 while –NO2 groups removes the DQI features. For substituents at position 5, both of them are nonactive for tuning QI. The conductance measurements by scanning tunneling microscopy break junction show a good agreement with the theoretical prediction. More than two order of magnitude single-molecule conductance on/off ratio could be achieved at the different positions of –NO2 substituent groups at room temperature. The present work proves chemical substituents can be used for tuning QI features in single molecular junctions, which provides a feasible way toward realization of high-performance molecular devices.

Regio- and Steric Effects on Single Molecule Conductance of Phenanthrenes

Here, six phenanthrene (the smallest arm-chair graphene nanoribbon) derivatives with dithiomethyl substitutions at different positions as the anchoring groups were synthesized. Scanning tunneling microscopy break junction technique was used to measure their single molecule conductances between gold electrodes, which showed a difference as much as 20-fold in the range of ∼10-2.82 G0 to ∼10-4.09 G0 following the trend of G2,7 > G3,6 > G2,6 > G1,7 > G1,6 > G1,8. DFT calculations agree well with this measured trend and indicate that the single molecule conductances are a combination of energy alignment, electronic coupling, and quantum effects. This significant regio- and steric effect on the single molecule conductance of phenanthrene model molecules shows the complexity in the practice of graphene nanoribbons as building blocks for future carbon-based electronics in one hand but also provides good conductance tunability on the other hand.

Tracking Confined Reaction Based on Host-Guest Interaction Using Single-Molecule Conductance Measurement.

The host-guest interaction acts as an essential part of supramolecular chemistry, which can be applied in confined reaction. However, it is challenging to obtain the dynamic process during confined reactions below micromolar concentrations. In this work, a new method is provided to characterize the dimerization process of the guest 1,2-bis(4-pyridinyl) ethylene in host cucurbit[8]curil using scanning tunneling microscope-break junction (STM-BJ) technique. The guest reaction kinetics is quantitatively by nuclear magnetic resonance (NMR) and in situ single-molecule junctions. It is found that in the single-molecule conductance measurements, the electrical signals of the reactants with a concentration as low as 5× 10-6 m are clearly detected, and the reaction kinetics at micromolar concentrations are further obtained. However, in NMR measurements, the characteristic peak signal of the reactants is undetectable when the concentration of the reactants is lower than 0.5× 10-3 m and it cannot be quantified. In addition, the strong electric field from the nanogap accelerates the reaction. This work reveals that single-molecule STM-BJ techniques are more sensitive for tracking confined reactions than that by NMR techniques and can be used to study effect of extremely strong electric field on kinetics.