Lichen Samples Research Articles

Bacterial phylotypes associated with rock-dwelling Umbilicaria Lichens from Arctic/Subarctic areas in North America and Northern Europe

AbstractThe diversity of bacteria associated with lichens has received increasing attention. However, studies based on next-generation sequencing of microbiomes have not yet been conducted in the Arctic and Subarctic regions. In this study, rock-dwelling lichens belonging to the Umbilicariaceae family were sampled from the Arctic and Subarctic biological zones. The primary research purpose was to undertake a comparative investigation of the bacterial composition and diversity, identify potential indicators, and explore their potential metabolic pathways. 18S rRNA gene sequences of the fungal partner belonging to the genus Umbilicaria (Ascomycota) and the algal partner affiliated with the lineage Trebouxia (Chlorophyta). Comparing Umbilicaria spp. with a previous study in the Antarctic zone, the fungal partners were more inclined to cluster by sampling region. Operational taxonomic units (OTUs) were established based on a predetermined similarity threshold for V3-V4 sequences, which were ascribed to 19 bacterial phyla, and ten of them were consistently present in all samples. The most distinct zonal indicator genera based on OTU frequencies from Arctic and Subarctic lichens were Capsulimonas (Armatimonadota) and Jatrophihabitans (Actinomycota), respectively. Although the Subarctic zone had higher biodiversity and species richness based on alpha-diversity, the beta-diversity showed that the main species of bacterial communities were not significantly different, and the predictions of metabolic pathways based on the bacterial microbiome in lichen samples from the two zones were similar. These findings provide evidence that the geographical and/or bioclimatic environment and the different lichen-forming fungal species mainly and partially influence bacterial microbiomes and metabolic pathways.

Assessment of the aerogenic impact of the Norilsk industrial complex on the natural environment using epigeal lichens

Relevance. The need to study the features of aerogenic effects of the Norilsk industrial complex on the natural environment. Aim. To study the features of the aerogenic effects of the Norilsk industrial complex in the south-southwest zone at a distance of 40–60 km using lichens Cladonia rungeferina and Cetraria sp. Objects. Soil, lichens Cladonia rungeferina and Cetraria sp. Methods. Soil and lichen samples were taken 40–60 km south-southwest of the Norilsk Industrial district. Sampling was carried out according to the scheme of two profiles with a length of 14 and 20 km. The samples were analyzed using a set of methods consisting of X-ray fluorescence (S4 Pioneer Bruker AXS), atomic absorption methods (KVANT-2A, Julia-5K) and induction-coupled plasma mass spectrometry (ELEMENT-2) in the laboratory of the GIN RAS, Moscow. The concentration of Ti, V, Ni, Cr, Mn, Fe, Co, Cu, Zn, As, Se, Rb, Cd, Sb, Ba, La was determined. Results. The authors have obtained the data on the concentration of the 21 elements in soils and lichens. The paper demonstrates the calculation of distribution of elements in soil and lichens relative to the concentration in the upper part of the continental crust. The authors calculated the enrichment factor EF for Mn, Ni, Cu, Hg, Pb and estimated the distribution of this coefficient for both profiles. It is shown that the technogenic component of the aerogenic effect for Mn, Ni, Cu, Pb to the south-southwest of the Norilsk industrial complex at a distance of 40–60 km is practically absent. The increased values of the enrichment factor EF in lichens for Hg are explained by a combination of two factors – the constant presence of mercury in significant concentrations in ecosystems and tundra fires that took place in this zone in 2019–2020, which ultimately led to the re-deposition of Hg in the burnt areas.

Paracraurococcus lichenis sp. nov., isolated from lichen in Thailand.

A novel bacterium, designated as strain LOR1-02T and isolated from a lichen sample collected from Kham Riang Subdistrict, Kantharawichai District, Maha Sarakham Province, Thailand, underwent thorough investigation utilizing a polyphasic taxonomic approach. Strain LOR1-02T demonstrated growth within a temperature range of 20-42°C (optimal at 30°C), pH range of 5.0-7.5 (optimal at pH 7.0), and tolerance to 4.0% (w/v) NaCl. Phylogenetic analysis revealed its close relation to Paracraurococcus ruber JCM 9931T, with a 16S rRNA gene sequence similarity of 97.16%, placing it within the genus Paracraurococcus. The approximate genome size of strain LOR1-02T was determined to be 8.6Mb, with a G + C content of 70.9mol%. Additionally, ANIb, ANIm, and AAI values between the whole genomes of strain LOR1-02T and type strains were calculated as 82.6-83.4%, 86.1-86.8%, and 81.4-82.2%, respectively, while the dDDH value was determined to be 26.3-28.5% (C.I. 24.0-31.0%). The predominant fatty acids detected were C18:1ω7c and/or C18:1ω6c, C16:0, and C18:12OH. The major ubiquinone identified was Q-10, and the polar lipids included phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, diphosphatidylglycerol, along with unidentified phosphoaminolipid, lipids, and an amino lipid. Based on comprehensive phenotypic, chemotaxonomic, and genotypic characterization, it is concluded that strain LOR1-02T represents a novel species within the genus Paracraurococcus, for which the name Paracraurococcus lichenis sp. nov. is proposed. The type strain designation is LOR1-02T (= JCM 33121T =NBRC 112776T = TISTR 2503T).

Luteipulveratus flavus sp. nov. isolated from two lichen species.

Two novel strains, YIM 133132T and YIM 133296, were isolated from lichen samples collected from Yunnan Province, Southwest PR China. YIM 133132T and YIM 133296 are aerobic, Gram-staining-positive, non-motile actinomycetes. They are also catalase-positive and oxidase-negative, and YIM 133132T formed flat yellowish colonies that were relatively dry on YIM38 agar medium. Flat yellowish colonies of YIM 133296 were also observed on YIM38 agar medium. YIM 133132T grew at 25-35 °C (optimum 25-30 °C), pH 6.0-9.0 (optimum pH 7.0) and in the presence of 0-8% (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strains YIM 133132T and YIM 133296 represented members of the genus Luteipulveratus and exhibited high sequence similarity (96.93%) with Luteipulveratus halotolerans C296001T. The genomic DNA G+C content of both strains was 71.8%. The DNA-DNA hybridisation (dDDH) values between YIM 133132T and YIM 133296 were 85.1%, and the DNA-DNA hybridisation value between YIM 133132T and YIM 133296 and L. halotolerans C296001T was 23.4%. On the basis of the draft genome sequences, the average nucleotide identity (ANI) between strains YIM 133132T and YIM 133296 and L. halotolerans C296001T was 80.8%. The major menaquinones that were identified were MK-8(H4), MK-9 and MK-8(H2). The polar lipids were diphosphatidylglycerol and phosphatidylinositol. On the basis of the morphological, physiological, biochemical, genomic, phylogenetic and chemotaxonomic characteristics, strains YIM 133132T and YIM 133296 can be clearly distinguished from L. halotolerans C296001T, and the two strains represent a novel species for which the name L. flavus sp. nov. is proposed. The type strain is YIM 133132T (CGMCC= 1.61357T and KCTC= 49824T).

Diversity of lichen mycobionts and photobionts and their relationships in the Ny-Ålesund region (Svalbard, High Arctic).

Lichens are dual organisms, with one major mycobiont and one major photobiont in each lichen symbiosis, which can survive extreme environmental conditions in the Arctic. However, the diversity and distribution of lichen photobionts in the Arctic remain poorly understood compared to their mycobiont partners. This study explored the diversity of lichen mycobionts and photobionts in 197 lichen samples collected from the Ny-Ålesund region (Svalbard, High Arctic). The nuclear ribosomal internal transcribed spacer (ITS) regions were sequenced and phylogenetic analyses were performed. The relationships between mycobionts and photobionts, as well as the association patterns, were also investigated. A total of 48 species of lichen mycobionts (16 families, nine orders) and 31 species/lineages of photobionts were identified. These 31 photobiont species belonged to one class (Trebouxiophyceae) and five genera, including 22 species of Trebouxia, five species of Asterochloris, two species of Chloroidium, one species of Symbiochloris, and one species of Coccomyxa. The results indicated that most analyzed lichen mycobionts could associate with multiple photobiont species, and the photobionts also exhibited a similar pattern. The results provided an important reference dataset for characterizing the diversity of lichen mycobionts and photobionts in the High Arctic region.

Corrigendum: Spathaspora quercus f.a., sp. nov., a novel yeast isolated from rotting wood and a lichen sample in Kyushu region, Japan.

Corrigendum: Spathaspora quercus f.a., sp. nov., a novel yeast isolated from rotting wood and a lichen sample in Kyushu region, Japan.

Assessment of atmospheric pollution by potentially toxic elements in the urban areas of the Riotinto mining district

Ore mineralizations in bedrock and their exploitation may have a negative impact on air quality of surrounding urban areas and, subsequently, on human health. This study uses lichens as bioindicators of atmospheric pollution to evaluate the spatial distribution of potentially toxic elements (PTEs) in the towns close to the massive sulfide deposits of the Iberian Pyrite Belt (IPB) in SW Spain. Altogether 89 native lichen samples of Xanthoria parietina were collected from the mining towns, control towns out of the reach of the mining activity, as well as from distal sampling sites. The samples were analyzed for 29 elements after acid digestion. The concentrations for Co, Ni, Cu, Zn, As, Rb, Mo, Cd, Sn, Sb, Cs, Ba, W, Tl, Pb, S, and Fe are significantly higher in the mining towns in comparison to the control towns. The ore mineral-associated PTEs, including Cu, Zn, As, Ba, and Pb, exhibit extreme concentrations in the urban areas close to the mining activity, and particularly in the small settlement of La Dehesa next to the mineral processing plant and the tailings pond. The distal samples confirm the decrease in the concentrations of all PTEs, and these samples present similar values as in the control areas. The results, point at increased bioaccumulation of PTEs in the lichen thalli of the adjacent urban areas, suggesting that the air quality of the adjacent urban areas is locally impacted by the massive polymetallic sulfide deposits which is enhanced by the mining activity. Therefore, monitoring the urban air quality is recommended.

Analysis of lichen and moss samples by the EDXRF method

Analysis of lichen and moss samples by the <scp>EDXRF</scp> method

In-vitro Study on Anthelmintic and Insecticidal Activity of Macrolichens Collected from South Karnataka

In the present study, lichen samples were collected from the southern Karnataka state and were used for in-vitro anthelmintic and insecticidal activity. The three lichen samples Parmotrema tinctorum (Nyl.) Hale, Roccella montagnei Bèl. Emend. Awas, Everniastrum cirrhatum (Fr.) Hale was subjected to the extraction with solvents. The prepared extracts from the lichen species were evaluated for anthelmintic activity against Pheretima posthuma. 100% mortality was obtained from all the samples and it was compared with the reference drug albendazole for positive control. P. tinctorum methanolic extract showed the fastest result but on the other side, the slowest result was observed in the hexane extract. The insecticidal activity of the crude extracts of the lichens was tested against two insects Macrosiphum rosae (L.) and Sitophilus oryzae (L.). There was a 100% mortality rate observed in R. montagnei and E. cirrhatum methanolic extracts against M. rosae. In S. oryzae the methanolic extracts of P. tinctorum and E. cirrhatum with 75 and 50% mortality rates at 42 and 48 hours was observed. The promising results of lichen extracts towards insecticidal and anthelmintic activity were found to be a potential candidate for drug discovery and development against biopesticides.

Evaluation the Ingredients and Influence of Thermal Treatment on Physicochemical Properties and Bioactive Compounds of Evernia prunastri from Algeria

Background: Lichen is a symbiotic organism with unique structure composed of a fungal partner and an algal partner. It has been utilized in folk foods and medicines. The objective of the present study was to analyze the ingredients and the impact of heating on various physicochemical and phytochemical characteristics of a 500 g sample of lichen Evernia prunastri from Jijel, Algeria collected in May 2021. Methods: The nutritional value of the lichen was determined by studying various parameters. The metal contents were analyzed using an Atomic Absorption Spectrophotometer. The effect of heating (70 and 100 °C) on the physicochemical parameters, and bioactive compounds of aqueous extracts obtained by maceration in distilled water was studied. Statistical analysis was performed using ANOVA. Results: A high percentage of carbohydrates (64.00%) were observed in the lichen material. Pectin, fats, and crude proteins levels were low. High ash content (10.85%) was obtained with the presence of metal elements. Preliminary phytochemical analysis indicated the presence of polyphenols and flavonoids with 51.13 mg Gallic Acid Equivalent (GAE)/100 g and 17.87 mg Quercetin Equivalent (QE)/100 g of lichen, respectively. The lichen sample subjected to 70 °C demonstrated an increase in the parameters examined, with the exception of proteins and vitamin C. Conversely, the lichen sample treated at 100 °C exhibited a reduction in vitamin C, protein, and bioactive compound content, as well as an increase in sugar content. Titratable acidity and pH parameters were unaffected. Conclusion: The appreciable quantities of carbohydrates, crude fibers, and other compounds in this lichen suggest a potential use for these active ingredients in the preparation of functional food. Heating to 70 °C produces a preparation enriched in bioactive substances and sugars. However, heating to 100 °C, exposes the various tissues to degradation, potentially leading to a decrease in nutrients

Heavy metals accumulation in lichens Parmeliaceae and mahogany bark as an indicator of air and pollution levels in several locations in Bandung City

Background: Lichens and tree bark are well-known biomonitoring tools for accumulating pollutants in their tissues over an extended period. Objective: This study aims to determine the concentration of heavy metals accumulated in lichens and tree bark across various locations in Bandung City, analyze the impact of heavy metal accumulation on lichen diversity, and assess the lichen cover area on tree bark. Methods: Lichen and bark samples were collected from mahogany trees using plotless sampling at a height of 100 cm, employing a quadrat size of 20x32 cm² above the ground. A total of 25 sampling stations were distributed across five locations in Bandung City, including city parks, an urban forest park, and a bus station. The samples were analyzed using Atomic Absorption Spectrophotometry (AAS) to measure the concentration of heavy metals. Results: The results revealed that lichens and bark from Persib City Park (PCP) contained the highest concentration of chromium (Cr), with 17.08 μg/kg in lichens and 30.03 μg/kg in the bark, as well as lead (Pb), with 24.38 μg/kg in lichens and 15.49 μg/kg in the bark. Conversely, lichens and bark from Djuanda Forest Park (DFP) exhibited the lowest concentration of chromium (3.74 μg/kg in lichens and 3.56 μg/kg in the bark) and lead (3.74 μg/kg in lichens and 2.06 μg/kg in the bark). PCA analysis indicated that the accumulation of heavy metals in lichens and bark was associated with environmental factors, such as traffic density and bark pH. Conclusion: The accumulation of heavy metals in lichens and bark exhibited a negative correlation with lichen diversity and the area of lichen cover on the bark.

Passive biomonitoring of airborne microplastics using lichens: A comparison between urban, natural and protected environments

Currently, natural and urban ecosystems are affected by different types of atmospheric deposition, which can compromise the balance of the environment. Plastic pollution represents one of the major threats for biota, including lichens. Epiphytic lichens have value as bioindicators of environmental pollution, climate change, and anthropic impacts. In this study, we aim to investigate the lichen bioaccumulation of airborne microplastics along an anthropogenic pollution gradient. We sampled lichens from the Genera Cladonia and Xanthoria to highlight the effectiveness of lichens as tools for passive biomonitoring of microplastics. We chose three sites, a “natural site” in Altipiani di Arcinazzo, a “protected site” in Castelporziano Presidential estate and an “urban site” in the centre of Rome. Overall, we sampled 90 lichens, observed for external plastic entrapment, melt in oxygen peroxide and analysed for plastic entrapment. To validate the method, we calculated recovery rates of microplastics in lichen. Particularly, 253 MPs particles were detected across the 90 lichen samples: 97 % were fibers, and 3 % were fragments. A gradient in the number of microplastic fibers across the sites emerged, with increasing accumulation of microplastics from the natural site (n = 58) to the urban site (n = 116), with a direct relationship between the length and abundance of airborne microplastic fibers. Moreover, we detected the first evidences of airborne mesoplastics entrapped by lichens. On average, the natural site experienced the shortest fibre length and the centre of Rome the longest. No differences in microplastics accumulation emerged from the two genera. Our results indicated that lichens can effectively be used for passive biomonitoring of microplastic deposition. In this scenario, the role of lichens in entrapping microplastics and protecting pristine areas must be investigated. Furthermore, considering the impact that airborne microplastics can have on human health and the effectiveness of lichens as airborne microplastic bioindicators, their use is encouraged.

Assessment and Evaluation of Atmospheric Trace Metals Pollution in Lapai Metropolis, Niger State Using Foliose Epiphytic Lichen (Parmelia sulcata)

The levels of atmospheric trace metals were determined using foliose epiphytic lichens (Parmelia sulcata) samples collected in eight (8) different locations within the residential areas and two control locations outside the residential area of Lapai town in Lapai local government of Niger State. A stratified random sampling technique was adopted and the analysis of the samples with atomic absorption spectrophotometer (AAS) gives the concentration range of the metals as follows; 1.123-7.837 mg/kg for Fe, 4.579-6.627 mg/kg for Pb, 0.210-2.152 mg/kg for Cr, 0.491-1.171 mg/kg for Ni, 0.018-0.983 mg/kg for Cd, 0.057-1.471 mg/kg Zn, 0.198-1.287 mg/kg for Mn, and 0.098-2.583 mg/kg for Cu but Selenium was not detected in all the samples. The levels of some of these metals were slightly higher compared to recommend USEPA (1993) limits but lower than FEPA (1991) limits. However, the distribution of these metals was not uniform across the samples, though their level was still at the background and very low compared to the reports on similar studies from industrialized areas of South-south and South-west Nigeria and other European countries. The variation in concentration of these metals at P≤0.05 indicates their source is mainly anthropogenic in origin. Epiphytic lichens validate the cost-effectiveness of this method for evaluating, assessing, and identifying depositional sources of the metals in the environment. The study revealed the atmospheric trace metal concentration of the area under study to be at a threshold level and hence the environment is still very safe from atmospheric trace metal pollution.

Terrestrial Tardigrada (Water Bears) of the Słowiński National Park (Northern Poland)

In this paper, samples of mosses, lichens and cryptogams (mosses mixed with lichens) collected from Słowiński National Park (northern Poland) were studied for water bears (Tardigrada). In total, 27 tardigrade taxa were identified: 21 to the species level, one identified as „cf.” and three to the genus level, with six species (Eremobiotus ginevrae, Hypsibius dujardini, Hypsibius scabropygus, Milnesium beasleyi, Minibiotus intermedius and Notahypsibius pallidoides) being new records for Poland. Two possibly new for science species were also found, belonging to genera Diphascon and Mesobiotus. Additionally, a very rare eutardigrade Pseudohexapodibius degenerans has been found in the samples analyzed in the present study for the first time outside of the type locality. The effects of habitat and substrate on species richness were also investigated and showed no significant differences between mosses and lichens, as well as all substrates except for concrete walls.

Lichen biomonitoring to assess spatial variability, potential sources and human health risks of polycyclic aromatic hydrocarbons (PAHs) and airborne metal concentrations in Manchester (UK)

Airborne metals and organic pollutants are linked to severe human health impacts, i.e. affecting the nervous system and being associated with cancer. Airborne metals and polycyclic aromatic hydrocarbons (PAHs) in urban environments are derived from diverse sources, including combustion and industrial and vehicular emissions, posing a threat to air quality and subsequently human health. A lichen biomonitoring approach was used to assess spatial variability of airborne metals and PAHs, identify potential pollution sources and assess human health risks across the City of Manchester (UK). Metal concentrations recorded in lichen samples were highest within the city centre area and along the major road network, and lichen PAH profiles were dominated by 4-ring PAHs (189.82 ng g−1 in Xanthoria parietina), with 5- and 6-ring PAHs also contributing to the overall PAH profile. Cluster analysis and pollution index factor (PIF) calculations for lichen-derived metal concentrations suggested deteriorated air quality being primarily linked to vehicular emissions. Comparably, PAH diagnostic ratios identified vehicular sources as a primary cause of PAH pollution across Manchester. However, local more complex sources (e.g. industrial emissions) were further identified. Human health risk assessment found a “moderate” risk for adults and children by airborne potential harmful element (PHEs) concentrations, whereas PAH exposure in Manchester is potentially linked to 1455 (ILCR = 1.45 × 10−3) cancer cases (in 1,000,000). Findings of this study indicate that an easy-to-use lichen biomonitoring approach can aid to identify hotspots of impaired air quality and potential human health impacts by airborne metals and PAHs across an urban environment, particularly at locations that are not continuously covered by (non-)automated air quality measurement programmes.Graphical

Microbiomic Analysis of Bacteria Associated with Rock Tripe Lichens from Alpine Areas in Eastern Alps and Equatorial Africa

The diversity of bacteria associated with alpine lichens was profiled. Lichen samples belonging to the Umbilicariaceae family, commonly known as rock tripe lichens, were gathered from two distinct alpine fellfields: one situated on Mt. Brennkogel located in the Eastern European Alps (Austria), and the other on Mt. Stanley located in the Rwenzori mountains of equatorial Africa (Uganda). The primary aim of this research was to undertake a comparative investigation into the bacterial compositions, and diversities, identifying potential indicators and exploring their potential metabolisms, of these lichen samples. Bulk genomic DNA was extracted from the lichen samples, which was used to amplify the 18S rRNA gene by Sanger sequencing and the V3-V4 region of the 16S rRNA gene by Illumina Miseq sequencing. Examination of the fungal partner was carried out through the analysis of 18S rRNA gene sequences, belonging to the genus Umbilicaria (Ascomycota), and the algal partner affiliated with the lineage Trebouxia (Chlorophyta), constituted the symbiotic components. Analyzing the MiSeq datasets by using bioinformatics methods, operational taxonomic units (OTUs) were established based on a predetermined similarity threshold for the V3-V4 sequences, which were assigned to a total of 26 bacterial phyla that were found in both areas. Eight of the 26 phyla, i.e. Acidobacteriota, Actinomycota, Armatimonadota, Bacteroidota, Chloroflexota, Deinococcota, Planctomycetota, and Pseudomonadota, were consistently present in all samples, each accounting for more than 1% of the total read count. Distinct differences in bacterial composition emerged between lichen samples from Austria and Uganda, with the OTU frequency-based regional indicator phyla, Pseudomonadota and Armatimonadota, respectively. Despite the considerable geographic separation of approximately 5430 km between the two regions, the prediction of potential metabolic pathways based on OTU analysis revealed similar relative abundances. This similarity is possibly influenced by comparable alpine climatic conditions prevailing in both areas.

NEW ADDITIONS OF LICHENS FROM ASSAM, INDIA

An account of 7 lichen species new to lichen biota of Assam is presented. The species are Bactrospora paludicola, Buellia pleiotera, Byssolecania deplanata, Graphis urandrae, Gyalidea fritzei, Mycobilimbia philippina and Staurothele fissa. Among them, B. paludicola and G. fritzei are being reported for the first time from India. The lichen samples were collected from various protected areas of Assam and a detailed systematic account is provided.

Biomonitoring with Lichens: Evaluating Heavy Metal Concentrations, Environmental Factors, and Lichen Diversity in Bengaluru, Karnataka, India

Lichens are commonly used in biomonitoring due to their unique characteristics that make them a cost-effective option. Unlike chemical analysis, sampling lichen diversity is less expensive, enabling a more extensive sampling coverage while reducing costs. This diverse group of organisms can be used to detect areas that are affected by pollution, land use changes, and ecological imbalances. In recent years, researchers have been working to establish a reliable protocol for lichen sampling in biomonitoring to enhance its utility and minimize any variations caused by extraneous environmental factors. In this article concentrations of heavy metals s (Cd, Cr, Cu, Fe, Ni, Pb and Zn), acidity and electrical conductance of few flowering trees bark (Albizialebbeck, Delonixregia, Pongamiaglabra, Callistemon Lanceolatus, Cassia Fistula, Cassia Javanica) were evaluated to determine the impact the lichen value diversity in six different places based on different environmental factors. It has been stated that the correlation between acidity level and lichen species exists in all investigated tree species. Six lichen species (Chrysothrixcandelaris (L.) Laundon, Graphisscripta (L.) Ach, G. scripta (L.) Ach., leucosorodes Nyl, D. consimilis (Stirton) Awasthi, D. aegialita (Afz. in Ach.) Moore and L.(perplexa Brodo) were registered, among them three were foliose and three were crutose. Lichen leucosorode Nyl was predominant in Albizialebbeck, Delonixregia, Pongamiaglabra trees. It was observed that the lichen diversity was less near heavy traffic location, industrial areas and also rougher bark of trees provided a better habitat of wider variety of lichen species.

Contribution of Mine-Derived Airborne Particulate Matter to Ca, Fe, Mn and S Content and Distribution in the Lichen Punctelia hypoleucites Transplanted to Bajo de la Alumbrera Mine, Catamarca (Argentina).

The aim of this work was to relate the contribution of mine-derived airborne particulate matter to Ca, Fe, Mn and S content and distribution in Punctelia hypoleucites transplanted to Bajo de la Alumbrera, an important open-pit mine in Catamarca, Argentina. Lichen samples were transplanted to four monitoring sites: two sites inside the mine perimeter and two sites outside the mine. After three months, elemental distribution in samples was analyzed by microparticle-induced X-ray emission (microPIXE), and elemental concentration was determined by specific techniques: Ca and Fe by instrumental neutron activation analysis, Mn by inductively coupled plasma atomic emission spectrometry and S by a turbidimetric method. A differential distribution of S and Ca in thalli transplanted in-mine sites was detected compared to that of samples transplanted outside-mine sites. An overlap of Fe and S in the upper cortex of the apothecium section was observed, leading to infer a mineral association of both elements. Similar association was observed for Ca and S. In addition to these results, the significantly higher concentration detected for S and Mn in in-mine site samples suggests a contribution of Fe, S, Ca and Mn of mining origin to the content and distribution of these elements in P. hypoleucites. MicroPIXE complemented with Mössbauer spectroscopy analysis determined the presence of pyrite particles together with other iron-bearing minerals displaying different degrees of oxidation. These results point to a mining origin of the airborne particulate matter trapped by the lichen thalli transplanted to Bajo de la Alumbrera. These findings indicate that P. Hypoleucites acts as an excellent air quality biomonitor in the Bajo de la Alumbrera mine area.

Spathaspora quercus f.a., sp. nov., a novel yeast isolated from rotting wood and a lichen sample in Kyushu region, Japan.

Four novel d-xylose assimilation yeast strains were isolated from rotting wood and a lichen sample collected in the Kyushu region of Japan. Species identifications were performed by analysing the internal transcribed spacer 5.8S region sequences and the D1/D2 variable domain of the large subunit rRNA gene. Phylogenetic analysis suggested that these isolates are closely related to Spathaspora species isolated in China, such as S. jiuxiensis and S. parajiuxiensis. These isolates also showed sequence similarity to deposited sequences labelled as Schwanniomyces. They did not produce asci and ascospores under any of the test conditions. Based on phylogenetic analysis and phenotypic differences, Spathaspora quercus f.a., sp. nov. is proposed to accommodate these isolates. The holotype of Spathaspora quercus f.a., sp. nov. is NBRC 116146T (CBS18366). This species is able to ferment d-xylose, and a d-xylose fermentation test revealed that this species produces a considerable amount of xylitol.