Assembly Rules Research Articles

Spatiotemporal dimensions of community assembly

AbstractEcological communities are assembled through a series of multiple processes, including dispersal, abiotic and biotic filtering, and ecological drift. Although these assembly processes act in concert to structure local communities, their relative importance is considerably variable among study systems. While such contingency of community assembly has been widely appreciated, the empirical and theoretical evidence is scattered around in the literature, and few efforts have been made to synthesize it. In this mini‐review, we summarize the accumulated evidence of the context‐dependency of community assembly rules, to reach a rough generalization of the contingency. Specifically, we argue that spatial and temporal dimensions can serve as general axes that regulate the relative importance of assembly processes. To this end, we synthesize the current understanding of how the relative importance of multiple assembly processes changes with spatial scales and complexity, and with time in the long and short terms. This review concludes that spatial and temporal dimensions can be common currencies of community assembly rules that are shared across various systems.

Environmental DNA reveals a mismatch between diversity facets of Amazonian fishes in response to contrasting geographical, environmental and anthropogenic effects.

Freshwater ecosystems are among the most endangered ecosystem in the world. Understanding how human activities affect these ecosystems requires disentangling and quantifying the contribution of the factors driving community assembly. While it has been largely studied in temperate freshwaters, tropical ecosystems remain challenging to study due to the high species richness and the lack of knowledge on species distribution. Here, the use of eDNA-based fish inventories combined to a community-level modelling approach allowed depicting of assembly rules and quantifying the relative contribution of geographic, environmental and anthropic factors to fish assembly. We then used the model predictions to map spatial biodiversity and assess the representativity of sites surveyed in French Guiana within the EU Water Framework Directive (WFD) and highlighted areas that should host unique freshwater fish assemblages. We demonstrated a mismatch between the taxonomic and functional diversity. Taxonomic assemblages between but also within basins were mainly the results of dispersal limitation resulting from basin isolation and natural river barriers. Contrastingly, functional assemblages were ruled by environmental and anthropic factors. The regional mapping of fish diversity indicated that the sites surveyed within the EU WFD had a better representativity of the regional functional diversity than taxonomic diversity. Importantly, we also showed that the assemblages expected to be the most altered by anthropic factors were the most poorly represented in terms of functional diversity in the surveyed sites. The predictions of unique functional and taxonomic assemblages could, therefore, guide the establishment of new survey sites to increase fish diversity representativity and improve this monitoring program.

DNA Nanostructure-Guided Plasmon Coupling Architectures

DNA Nanostructure-Guided Plasmon Coupling Architectures

Ant communities in disturbed subtropical landscapes: is climate more important than stochastic processes?

Functional trait-based approaches have provided advances in the understanding of community assembly rules. Broad generalisations remain, however, limited due to the idiosyncratic nature of taxa and ecosystems, especially in tropical regions. We use fine scale resolution (30m grid) environmental variables and community surveys from nearly 100 secondary tropical forest sites to study niche-based or neutral assembly mechanisms in ground dwelling ants. This provides a unique opportunity for understanding fine scale drivers of taxonomic, functional and phylogenetic diversity in a region characterized by large topographic and climatic differences on a relatively small geographic scale. Precipitation emerged as the most consistent environmental correlate, in shaping taxonomic, phylogenetic and functional aspects of the communities. Functional diversity was weakly associated with topography and temperature related variables. The fourth corner model revealed that femur, scape and mandible length were key traits in response to precipitation, and that communities showed a functional homogenization towards shorter appendages at wetter sites. Our results suggest that neutral and deterministic assembly processes act in concert to shape the taxonomic, phylogenetic and functional aspects of leaf litter ant assemblages. The use of multiple complementary metrics and approaches along environmental gradients are powerful to reveal the subtilities of assembly processes and provide insight into the ways future communities might change.

Environmental filtering and mass effect are two important processes driving lake benthic diatoms: Results of a DNA metabarcoding study in a large lake.

Environmental filtering is often found to dominate assembly rules in diatoms. These microalgae are diverse, especially at subspecies level, and tend to exhibit a niche phylogenetic conservatism. Therefore, other rules, such as competition or mass effects, should be detectable when environmental gradients and dispersal barriers are limited. We used metabarcoding to analyse benthic littoral diatom communities in 153 sites in a large lake (Geneva) exhibiting weak geographical barriers and weak environmental gradients outside river estuaries. We assessed assembly rules using variance partitioning, phylogenetic and source tracking analyses. No phylogenetic over-dispersion of communities, indicative of exclusive competition, was detected. Instead, we found these communities to be phylogenetically over-clustered, indicating environmental filtering, which was even stronger near river estuaries where environmental gradients are stronger. Finally, using a Bayesian method (SourceTracker), we found that rivers flowing into the lake bring communities that settle, especially in sites close to estuaries. Rivers with the highest discharges are primarily responsible for immigration, explaining 27% of lake composition. Therefore, despite favourable conditions to observe other rules, our results support that diatom communities are prominently assembled by environmental filtering and immigration processes, in particular from rivers. However, this does not exclude that other assembly rules may be at play at a finer spatial, temporal and/or phylogenetic scale.

Do large‐scale associations in birds imply biotic interactions or environmental filtering?

AbstractAimThere has been a wide interest in the effect of biotic interactions on species' occurrences and abundances at large spatial scales, coupled with a vast development of the statistical methods to study them. Still, evidence for whether the effects of within‐trophic‐level biotic interactions (e.g. competition and heterospecific attraction) are discernible beyond local scales remains inconsistent. Here, we present a novel hypothesis‐testing framework based on joint dynamic species distribution models and functional trait similarity to dissect between environmental filtering and biotic interactions.LocationFrance and Finland.TaxonBirds.MethodsWe estimated species‐to‐species associations within a trophic level, independent of the main environmental variables (mean temperature and total precipitation) for common species at large spatial scale with joint dynamic species distribution (a multivariate spatiotemporal delta model) models. We created hypotheses based on species' functionality (morphological and/or diet dissimilarity) and habitat preferences about the sign and strength of the pairwise spatiotemporal associations to estimate the extent to which they result from biotic interactions (competition, heterospecific attraction) and/or environmental filtering.ResultsSpatiotemporal associations were mostly positive (80%), followed by random (15%), and only 5% were negative. Where detected, negative spatiotemporal associations in different communities were due to a few species. The relationship between spatiotemporal association and functional dissimilarity among species was negative, which fulfils the predictions of both environmental filtering and heterospecific attraction.Main conclusionsWe showed that processes leading to species aggregation (mixture between environmental filtering and heterospecific attraction) seem to dominate assembly rules, and we did not find evidence for competition. Altogether, our hypothesis‐testing framework based on joint dynamic species distribution models and functional trait similarity is beneficial in ecological interpretation of species‐to‐species associations from data covering several decades and biogeographical regions.

Mapping the Function of Whole-Brain Projection at the Single Neuron Level.

Axonal projection conveys neural information. The divergent and diverse projections of individual neurons implythe complexity of information flow. It is necessary to investigate the relationship between the projection and functional information at the single neuron level for understanding the rules of neural circuit assembly, but a gap remains due to a lack of methods to map the function to whole-brain projection. Here an approach is developed to bridge two-photon calcium imaging in vivo with high-resolution whole-brain imaging based on sparse labeling with the genetically encoded calcium indicator GCaMP6. Reliable whole-brain projections are captured by the high-definition fluorescent micro-optical sectioning tomography (HD-fMOST). A cross-modality cell matching is performed and the functional annotation of whole-brain projection at the single-neuron level (FAWPS) is obtained. Applying it to the layer 2/3 (L2/3)neurons in mouse visual cortex, the relationship is investigated between functional preferences and axonal projection features. The functional preference of projection motifs and the correlation between axonal length in MOs and neuronal orientation selectivity, suggest that projection motif-defined neurons form a functionally specific information flow, and the projection strength in specific targets relates to the information clarity. This pipeline provides a new way to understand the principle of neuronal information transmission.

Ectomycorrhizospheric Microbiome Assembly Rules of Quercus mongolica in the Habitat of SongRong (Tricholoma matsutake) and the Effect of Neighboring Plants

Host plants are known to determine the distribution and development of ectomycorrhizal fungi such as Tricholoma matsutake; however, we found that the fruit body distribution of T. matsutake was different in Quercus mongolica pure or mixed forests. To clarify the fungal and other microbial composition rules of host plants, ectomycorrhizal root tip samples of Q. mongolica mixed with different plants were selected for study. By using high-throughput sequencing, we obtained 5229 fungal and 38,834 bacterial amplicon sequence variants (ASVs) as determined by internally transcribed spacer ribosomal RNA (ITS rRNA) and 16S ribosomal RNA (16S rRNA) sequencing via the Illumina NovaSeq platform. Among the neighboring plants, there were no significant differences in fungal or bacterial alpha diversity, but there was a significant difference (p < 0.05) in ectomycorrhizal alpha diversity. The fungal, bacterial and ectomycorrhizal fungal communities in the ectomycorrhizosphere of Q. mongolica all showed differences in beta diversity and species composition. In addition, the physical and chemical properties of the soil and the relationships among species could affect the relative abundance of fungi, bacteria and ectomycorrhizal fungi, but the soil microbial pool had little effect on microbial composition. Using PICRUSt2, some significantly up-regulated (p < 0.05) metabolic functions in ectomycorrrhizospheric microbial communities were predicted, which would be an interesting research field for ectomycorrhizal microecology.

A de novo matrix for macroscopic living materials from bacteria

Engineered living materials (ELMs) embed living cells in a biopolymer matrix to create materials with tailored functions. While bottom-up assembly of macroscopic ELMs with a de novo matrix would offer the greatest control over material properties, we lack the ability to genetically encode a protein matrix that leads to collective self-organization. Here we report growth of ELMs from Caulobacter crescentus cells that display and secrete a self-interacting protein. This protein formed a de novo matrix and assembled cells into centimeter-scale ELMs. Discovery of design and assembly principles allowed us to tune the composition, mechanical properties, and catalytic function of these ELMs. This work provides genetic tools, design and assembly rules, and a platform for growing ELMs with control over both matrix and cellular structure and function.

Ecotones in Central European forest–steppe: Edge effect occurs on hard rocks but not on loess

AbstractAimsWe asked how geological substrate affects the distribution of plant species between forest interiors, forest edges, and steppe patches in the forest–steppe landscapes. Specifically, we sought for the presence of the edge effect at the forest–grassland transitions on different substrates.LocationAustria, Czech Republic, Hungary, Slovakia and western Ukraine.MethodsWe recorded the occurrence of vascular plant species in forest interiors, at forest edges and in steppe patches on 40 forest–steppe sites located on four substrates (andesite, dolomite, limestone and loess). We compared the distribution of species diversity, beta diversity (using multivariate analysis), the number of shared species between habitats and the estimation of vegetation biomass among forest‐steppe habitats on different substrates.ResultsThe edge effect was observed on hard rocks, while it was absent on loess, where the ecotone species richness was intermediate between that of forest and steppe. Loess sites also had the lowest species turnover between forest and steppe and the lowest number of edge specialists.ConclusionsSubstrate has a strong effect on the formation of forest–steppe mosaics. It shapes the assembly rules and plant community diversity within individual habitat mosaics. Plant communities on each substrate can respond differently to changing climate. The strong assembly rules on hard rocks may be more likely to result in species loss than on loess or similar soft sediments, where a larger number of species find their optimum in more than one forest–steppe habitat.

Even allocation of benefits stabilizes microbial community engaged in metabolic division of labor.

Microbial communities execute metabolic pathways to drive global nutrient cycles. Within a community, functionally specialized strains can perform different yet complementary steps within a linear pathway, a phenomenon termed metabolic division of labor (MDOL). However, little is known about how such metabolic behaviors shape microbial communities. Here, we derive a theoretical framework to define the assembly of a community that degrades an organic compound through MDOL. The framework indicates that to ensure community stability, the strains performing the initial steps should hold a growth advantage (m) over the "private benefit" (n) of the strain performing the last step. The steady-state frequency of the last strain is then determined by the quotient of n and m. Our experiments show that the framework accurately predicts the assembly of our synthetic consortia that degrade naphthalene through MDOL. Our results provide insights for designing and managing stable microbial systems for metabolic pathway optimization.

Conserved developmental trajectories of the cecal microbiota of broiler chickens in a field study.

There is great interest in identifying gut microbiota development patterns and underlying assembly rules that can inform strategies to improve broiler health and performance. Microbiota stratification using community types helps to simplify complex and dynamic ecosystem principles of the intestinal microbiota. This study aimed to identify community types to increase insight in intestinal microbiota variation between broilers and to identify factors that explain this variation. A total of 10 well-performing poultry flocks on four farms were followed. From each flock, the cecal content of nine broilers was collected at 7, 14, and 35 days posthatch. A total of two robust community types were observed using different clustering methods, one of which was dominated by 7-day-old broilers, and one by 35-day-old broilers. Broilers, 14-day-old, were divided across both community types. This is the first study that showed conserved cecal microbiota development trajectories in commercial broiler flocks. In addition to the temporal development with age, the cecal microbiota variation between broilers was explained by the flock, body weight, and the different feed components. Our data support a conserved development of cecal microbiota, despite strong influence of environmental factors. Further investigation of mechanisms underlying microbiota development and function is required to facilitate intestinal health promoting management, diagnostics, and nutritional interventions.

Relationships between Fish Communities and Habitat before and after a Typhoon Season in Tropical Mountain Streams

The responses of habitat and fish communities to extreme hydrological and habitat disturbance in typhoon-prone mountain streams are not studied much. Such landscape–climate settings may provide a unique opportunity for fish to evolve without special habitat adaptation and involve different assembly rules compared to temperate regions. This study aimed to compare fish communities and habitat factors before and after the typhoon season and to test the influences of various aspects of habitat on fish assemblages between seasons. Fish and habitats were surveyed at 30 wadable stream sites in March and December 2010 in tropical southern Taiwan. Habitat variables differed between the pre-typhoon and post-typhoon seasons. Higher species richness and the total number of fish caught in the pre-typhoon season indicated fast recovery. Benthic fish were more vulnerable to typhoon disturbances than sub-benthic fish. Contrary to the original hypothesis, fish communities were more strongly related to physical habitats than water quality and riparian conditions. In addition, consistently high fish variance explained by habitat measures in the dry seasons indicated that environmental filtering predominated. Dominant fish species were related to main habitat gradients, characterized by low species richness but high beta-diversity. Our findings provide implications for fish conservation in typhoon-prone mountain streams.

Functional diversity of copepod assemblages along a basin-scale latitudinal gradient in the North Pacific Ocean

The northern Pacific Ocean is one of the most sensitive areas globally to climate change. Copepods typically account for between 60% and 90% of mesozooplankton in the open ocean. Because copepods are a key link in marine food webs, their response to environmental changes is an important topic in marine biodiversity and ecosystem functioning relationships. The relationship between copepod assemblages and the marine environment in the northern Pacific Ocean from a traits-based perspective has been largely unknown until now. In this study, we used the functional traits and geographic distribution of 177 copepod species along a latitudinal gradient, ranging from 4°S to 46°N in the northern Pacific Ocean, to evaluate the latitudinal variation of functional diversity and assembly rules of copepod assemblages. Based on a cluster analysis of four key functional traits, seven functional groups were identified. Redundancy analysis revealed environmental preferences for different functional groups. Large carnivores showed a stronger preference for higher temperatures than small carnivores, Omnivores and herbivores showed a stronger preference for higher chlorophyll a concentrations. The distribution of detritivores was nearly independent of temperature and chlorophyll a concentration. Most functional diversity indices showed non-linear decreasing trends along the latitudinal gradient. These trends remained stable in the tropic and subtropic regions (WARM and NPSG), but decreased sharply in the Kuroshio extension and Pacific subarctic gyres regions (KURO and PSAG). A null model revealed the assembly rules of copepod assemblage significantly varied with latitude: environmental filtering was dominant in the KURO and PSAG, whereas both environmental filtering and limited similarity played important roles in the WARM and NPSG, in addition to the neutral process. Our results suggested that with ocean warming, a northward shift in the distribution range of specific functional groups (such as large carnivores) might significantly alter the biodiversity and ecosystem function of zooplankton communities in the Kuroshio extension region. This study highlights the importance of a traits-based approach in the study of biodiversity and ecosystem function in pelagic ecosystems at large scales.

Inferring community assembly processes from functional seed trait variation along elevation gradient

Abstract Assembly of plant communities has long been scrutinized through the lens of trait‐based ecology. Studies generally analyse functional traits related to the vegetative growth, survival and resource acquisition and thus ignore how assembly rules may affect plants at other stages of their life cycle, particularly when seeds disperse, persist in soil and germinate. Here, we analysed an extensive dataset of 16 traits for 167 species measured in‐situ in 36 grasslands located along an elevation gradient and studied the impact of abiotic filtering, biotic interactions and dispersal on traits reflecting different trait categories: plant vegetative growth, germination, dispersal and seed morphology. For each community, we quantified community‐weighted means (CWMs) and functional diversity (FD) for all traits and established their relationships to mean annual temperature. The seed traits were weakly correlated with vegetative traits. Therefore, these traits constituted independent axes of plant phenotypical variation that could be affected differently by community assembly rules. Abiotic filtering impacted mostly vegetative traits and to a lesser extent seed germination and morphological traits. Increasing low‐temperature stress in upland sites selected for short‐stature, slow‐growing and frost‐tolerant species that produce small quantities of small seeds with high degree of dormancy, high temperature requirements for germination and low germination speed. Biotic interactions, specifically competition in the lowlands and facilitation in uplands, also filtered some functional traits in the studied communities. The benign climate in lowlands seems to promote plant with competitive strategies that include fast growth and resource acquisition (vegetative growth traits) and early and fast germination (germination traits), whereas the effects of facilitation on the vegetative and germination traits were cancelled out by the strong abiotic filtering. The changes in the main dispersal vector from zoochory to anemochory along the elevation gradient strongly affected the dispersal and the seed morphological trait structure of the communities. This may be explained by stronger vertical turbulence and moderate warm upwinds and low grazing intensity in the uplands that select for light and non‐round shaped seeds with lower terminal velocity and endozoochorous potential. Synthesis. We demonstrate that, in addition to vegetative traits, seed traits can substantially contribute to functional structuring of plant communities along environmental gradients. Thus, the ‘hard’ seed traits related to germination and dispersal are critical to detect multiple, complex community assembly rules. Consequently, such traits should be included in core lists of plant traits and, when applicable, be incorporated into the analysis of community assembly.

Shift from soil chemical to physical filters in assembling riparian floristic communities along a flooding stress gradient

Understanding community assembly is a key issue in recognizing community succession and guiding the restoration of degraded ecosystems. Based on the stress-dominance hypothesis (SDH), along a gradient of increasing environmental stress, the relative importance of environmental filtering is supposed to be dominant but species interaction could be a minor process in assembling communities. However, this hypothesized model of the assembly-rule shift was equivocally supported by various studies. In this study, by examining riparian plant communities with the zonation distribution of species composition along a markedly contrast flooding-stress gradient, a general aim was to clarify whether assembly rules of the communities would be also sorted into the zonation pattern as expected by the SDH. Another aim was to identify how edaphic factors associate with the assembly processes. Firstly, we found that even under the distinct stress gradient, community assembly was not stratified into different rules as the SDH expected, but environmental filtering appeared as a dominant assembly process across the stress gradient. Secondly, although filtering holds as a dominant assembly rule, environmental filters were found different along the gradient. By disentangling the filters of edaphic attributes, we found that the filters significantly shifted from soil physical properties to chemical nutrients governing the filtering process along the gradient. This result revealed that, across the contrast gradient, the environmental deterministic process on assembly is so strong that the other assembly processes became weaker. By synthesizing our results, the SDH may not be applied even under the context of a contrast stress gradient, which suggests that environmental context may be a key in testing and applying the SDH. Finally, in guiding riparian restoration under strong stress, we suggest that soil physical structure rather than chemical nutrients shall be given a priority for consideration in rebuilding the degraded riparian communities.

Distinct Amphibian Elevational and Seasonal Phylogenetic Structures Are Determined by Microhabitat Variables in Temperate Montane Streams.

Simple SummaryPhylogenetic structure can be used to understand various ecological patterns. The main objective of the present study was to understand the elevational and seasonal amphibian phylogenetic structures in temperate montane streams. This study was conducted in 13 streams located in lowland and highland sites of Tianping mountain, China, in April, June, August, and October 2017, separately. We found that the elevational spatial patterns were not significantly different, but the seasonal temporal patterns differed significantly for amphibian phylogenetic structures, associated with the variation of microhabitat variables.Phylogenetic structure is a key facet of biodiversity, reflecting the evolutionary history of species, and thus can be used to understand various ecological patterns. Although amphibian phylogenetic structures have been tested across space and time separately, simultaneous quantifications are still needed. In the present study, amphibians in streams of Tianping mountain, China, were selected as the model to investigate their elevational spatial and seasonal temporal patterns of phylogenetic diversity. Specifically, 13 streams located in lowland and highland sites were sampled for amphibians and measured for microhabitat variables in April, June, August, and October 2017, separately. Four phylogenetic structural indices, including Faith’s PD, standardized effect size (SES) of Faith’s PD, mean pairwise phylogenetic distance index (MPD), and SES.MPD, were calculated. Our results revealed that amphibian phylogenetic patterns were not significantly different between lowland and highland sites, but differed significantly between four seasons, associated with distinct community assembly rules (phylogenetically overdispersed vs. phylogenetically clustered). Importantly, these patterns were strongly determined by microhabitat variables such as rock cover, water temperature, and water depth. Our results provide fundamental knowledge to better protect amphibian diversity. Both elevational and seasonal variations are important to understanding the general patterns of amphibian community assembly rules.

Elevational patterns of amphibian functional and phylogenetic structures in eastern Nepal Himalaya

AbstractAimExploring the mechanism underlying community assembly processes is considered as one of the central topics for biogeography. As one of the biodiversity hotspots, Nepal Himalaya has attracted increasing attention during the past decade. However, the main processes shaping amphibian assemblages in this area are still unclear. Here, we examined the elevational patterns of amphibian functional and phylogenetic structures to understand the main mechanism driving amphibian assemblages along an elevational gradient in eastern Nepal Himalaya.LocationEastern Nepal Himalaya.MethodsAmphibian taxonomic, functional and phylogenetic diversity were calculated, and their responses to the increasing elevations were investigated based on the linear regressions. The environmental determinants of amphibian diversity were revealed based on the incorporation of generalized linear models and hierarchical partitioning analyses. In addition, the mechanism driving amphibian assemblages from low to high elevations was tested by calculating the mean pairwise functional distance and the mean pairwise phylogenetic distance indices.ResultsAmphibian taxonomic, functional and phylogenetic diversity had contrast responses to the increasing elevations, which were strongly determined by variables such as air temperature, the number of trees, leaf litter cover and water pH. Interestingly, the trends of amphibian functional and phylogenetic diversity along an elevational gradient can be changed after controlling the effects of species richness. Moreover, determining process played a dominant role in shaping amphibian assemblages with the increasing elevations.ConclusionsOur results revealed the elevational patterns of amphibian functional and phylogenetic structures in eastern Nepal Himalaya, associated with the change in environmental variables. We also highlighted the dominant role of determining process in shaping amphibian assemblages. Overall, our results can help ecologists and managers better understand and formulate amphibian diversity conservation. In addition, our results also enriched the fundamental knowledge to understand the general patterns of community assembly rules in montane ecosystems.

Brassicaceae host plants mask the feedback from the previous year's soil history on bacterial communities, except when they experience drought.

Soil history operates through time to influence the structure and biodiversity of soil bacterial communities. Examining how different soil histories endure will help clarify the rules of bacterial community assembly. In this study, we established three different soil histories in field trials; the following year these plots were planted with five different Brassicaceae species. We hypothesized that the previously established soil histories would continue to structure the subsequent Brassicaceae bacterial root and rhizosphere communities. We used a MiSeq 16S rRNA metabarcoding strategy to determine the impact of different soil histories on the structure and biodiversity of the bacterial root and rhizosphere communities from the five different Brassicaceae host plants. We found that the Brassicaceae hosts were consistently significant factors in structuring the bacterial communities. Four host plants (Sinapis alba, Brassica napus, B. juncea, B. carinata) formed similar bacterial communities, regardless of different soil histories. Camelina sativa host plants structured phylogenetically distinct bacterial communities compared to the other hosts, particularly in their roots. Soil history established the previous year was only a significant factor for bacterial community structure when the feedback of the Brassicaceae host plants was weakened, potentially due to limited soil moisture during a dry year. Understanding how soil history is involved in the structure and biodiversity of bacterial communities through time is a limitation in microbial ecology and is required for employing microbiome technologies in improving agricultural systems.

Differences in prey availability across space and time lead to interaction rewiring and reshape a predator-prey metaweb.

Space and time promote variation in network structure by affecting the likelihood of potential interactions. However, little is known about the relative roles of ecological and biogeographical processes in determining how species interactions vary across space and time. Here we study the spatiotemporal variation in predator-prey interaction networks formed by anurans and arthropods and test for the effects of prey availability in determining interaction patterns, information that is often absent and limits the understanding of the determinants of network structure. We found that network dissimilarity between ecoregions and seasons was high and primarily driven by interaction rewiring.We also found that species turnover was positively related to geographical distance. Using a null model approach to disentangle the effect of prey availability on the spatial and temporal variation, we show that differences in prey availability were important in determining the variation in network structure between seasons and among areas. Our study reveals that fluctuations in prey abundance, alongside the limited dispersal abilities of anurans and their prey, may be responsible for the spatial patterns that emerged in our predator-prey metaweb. These findings contribute to our understanding of the assembly rules that maintain biotic processes in metacommunities and highlight the importance of prey availability to the structure of these systems.