Role Of Roots Research Articles

Chromosome‐scale genomes of Toona fargesii provide insights into competency of root sprouting

AbstractToona fargesii A. Chev., a versatile tree in the Toona genus of the Meliaceae family, is renowned for its exquisite timber and medicinal properties, offering promising benefits. Due to natural regeneration obstacles and long‐term excessive exploitation, it has been threatened in China. Intriguingly, root sprouting, which may diminish the genetic diversity and hinder population development, dominates the reproductive pattern of T. fargesii in the wild. However, the lack of complete genome information has hampered basic studies on the regeneration, classification, evolution and conservation of this species. Here, we report the genome of T. fargesii, which was sequenced using the PacBio platform and assembled into a high‐quality genome with a total size of 535.24 Mb. Of this, 97.93% of the assembled contigs were anchored onto 28 pseudochromosomes, achieving a chromosome‐level genome. The long terminal repeat assembly index score was 21.34, and the consensus quality value was 39.90%, indicating the accuracy and completeness of the genome. Comparative genome analysis suggested that a recent whole genome duplication event occurred between 22.1 and 50.1 Mya in the Toona genus, with the divergence time between T. fargesii and its relative T. sinensis estimated at approximately ~16.7 Mya. Additionally, 13 TfARR genes, which play integral roles in root sprouting by mediating cytokinin signaling, underwent rapid gene expansion and showed significant enrichment in the plant hormone signal transduction pathway. Furthermore, transcriptomic analysis demonstrated that differentially expressed genes between root sprouts and nonroot sprouts were significantly enriched in the zeatin biosynthesis pathway, indicating that cytokinin regulation is involved in root sprouting development. Collectively, the findings provide valuable genomic resources for the Toona genus and genetic insights into the mechanisms of root sprouting in T. fargesii.

Identifying and quantifying the contribution of maize plant traits to nitrogen uptake and use through plant modelling

Abstract Breeding for high nitrogen use efficient crops can contribute to maintaining or even increasing yield with less nitrogen. Nitrogen use is co-determined by N uptake and physiological use efficiency (PE, biomass per unit of N taken up), to which soil processes as well as plant architectural, physiological and developmental traits contribute. The relative contribution of these crop traits to N use is not well known but relevant to identify breeding targets in important crop species like maize. To quantify the contribution of component plant traits to maize N uptake and use, we used a functional-structural plant model. We evaluated the effect of varying both shoot and root traits on crop N uptake across a range of nitrogen levels. Root architectural traits were found to play a more important role in root N uptake than physiological traits. Phyllochron determined the structure of the shoot through changes in source: sink ratio over time which, in interaction with light and temperature, resulted in a significant effect on PE and N uptake. Photosynthesis traits were more relevant to biomass accumulation rather than yield, especially under high nitrogen conditions. The traits identified in this study are potential targets in maize breeding for improved crop N uptake and use.

Study on the Effect of Root Density on the Shear Strength of Root-Soil Composite: A Case Study of Cynodon Dactylon

Since the Belt and Road Initiative was proposed, many slopes with poor stability have been formed in China's highway and railway infrastructure construction. In response to the national goals set during the 14th Five-Year Plan to strengthen the ecological security barrier and protect biodiversity, and in line with the philosophy that "lucid waters and lush mountains are invaluable assets," ecological protection technology has been widely applied in slope protection. However, current research and design have not considered the role of roots in retaining walls. This study uses an eco-friendly reinforced soil retaining wall project as an example to investigate the relationship between root density and the cohesion and internal friction angle of root-soil composites through direct shear tests. The results show that increasing root density significantly improves the cohesion and internal friction angle of root-soil composites. When the root density is 5%, the cohesion and internal friction angle increased by 40.57% and 51.41%, respectively, compared to the unreinforced soil sample, providing a theoretical reference for engineering design.

Emissions of volatile organic compounds from aboveground and belowground parts of rapeseed (Brassica napus L.) and tomato (Solanum lycopersicum L.)

Root systems represent a source of Volatile Organic Compounds (VOCs) that may significantly contribute to the atmospheric VOC emissions from agroecosystems and shape soil microbial activity. To gain deeper insights into the role of roots in the VOC emissions from crops, we developed a dynamic chamber with isolated aboveground and belowground compartments, allowing for simultaneous measurements of VOC fluxes from both compartments in controlled conditions. We continuously monitored VOC emissions from intact plants of rapeseed (Brassica napus L.) and tomato (Solanum lycopersicum L.) i) over 24 h when plants were rooted in soil, and ii) over 6 h following soil removal. The measurements were performed using a highly sensitive Proton Transfer Reaction – Time of Flight – Mass Spectrometer and a Thermic Desorption- Gas Chromatography – Mass Spectrometer. Net VOC emissions measured at the soil surface represented <5 % of the aboveground emissions and were higher during the day than at night. However, when soil was removed, belowground VOC emissions became up to two times higher than aboveground emissions. This large increase in VOC emissions from roots observed after soil removal was almost exclusively due to methanol emissions. Differences in VOC composition between plant species were also detected with and without soil: rapeseed emitted more sulphurous and nitrogenous compounds and tomato more mono- and poly-unsaturated hydrocarbons. Our results suggest that roots may be a largely underestimated VOC source and that the soil is a strong sink for root-borne methanol. Root VOC emissions should be considered when agricultural practices involve roots excavation.

Rust Disease Changes the Abundance and Composition of Bacterial Community in Iris lactea Rhizosphere

The microbial community plays a vital role in root–environment interactions, which affect plant performance under biotic stress. Rust disease significantly affects plant growth, which may also affect rhizosphere microbial community. However, there is a scarcity of studies investigating the microbial community of rhizosphere under rust disease stress. Iris lactea is a widely utilized plant in gardening and landscaping due to its versatility and ornamental value, but it is often susceptible to rust disease in landscape settings. In this study, we compared the bacterial communities between bulk soil (non-cultivated control), rhizosphere soil of healthy Iris lactea plants, and rhizosphere soil of Iris lactea plants infected with rust disease (rhizosphere-R). Results revealed significant alterations in the abundance and composition of bacterial communities associated with rust disease infection. Specifically, the rhizosphere-R samples exhibited a decreased Shannon index at 1.9% compared to bulk soil and the relative abundance of Proteobacteria was increased at 31.65%. Moreover, distinct changes in β-diversity were shown between bulk soil and rhizosphere samples. Notably, potentially pathogenic bacteria increased in abundance under rust disease stress, while beneficial bacterial taxa decreased. Overall, our results show that rust disease affects the rhizosphere microbial community, which emphasizes the ecological implications of plant–microbe interactions under biotic stress and implications for developing targeted rhizobacterial-based biocontrol strategies.

Chickpea (Cicer arietinum) PHO1 family members function redundantly in Pi transport and root nodulation

Phosphorus (P), a macronutrient, plays key roles in plant growth, development, and yield. Phosphate (Pi) transporters (PHTs) and PHOSPHATE1 (PHO1) are central to Pi acquisition and distribution. Potentially, PHO1 is also involved in signal transduction under low P. The current study was designed to identify and functionally characterize the PHO1 gene family in chickpea (CaPHO1s). Five CaPHO1 genes were identified through a comprehensive genome-wide search. Phylogenetically, CaPHO1s formed two clades, and protein sequence analyses confirmed the presence of conserved domains. CaPHO1s are expressed in different plant organs including root nodules and are induced by Pi-limiting conditions. Functional complementation of atpho1 mutant with three CaPHO1 members, CaPHO1, CaPHO1;like, and CaPHO1;H1, independently demonstrated their role in root to shoot Pi transport, and their redundant functions. To further validate this, we raised independent RNA-interference (RNAi) lines of CaPHO1, CaPHO1;like, and CaPHO1;H1 along with triple mutant line in chickpea. While single gene RNAi lines behaved just like WT, triple knock-down RNAi lines (capho1/like/h1) showed reduced shoot growth and shoot Pi content. Lastly, we showed that CaPHO1s are involved in root nodule development and Pi content. Our findings suggest that CaPHO1 members function redundantly in root to shoot Pi export and root nodule development in chickpea.

Organophosphate esters uptake, translocation and accumulation in rice (Oryza sativa L.): impacts of lipid transporters and chemical properties.

To explore key factors involved in the uptake, translocation and accumulation of organophosphate esters (OPEs), computer simulation analysis and hydroponic experiments were executed. Lipid transporters with stocky-like active (SAC) cavities usually showed stronger binding affinities with the OPEs, especially when the SAC cavities belong to the Fish Trap model according to molecular docking. In our hydroponic trial, the binding affinity and gene expression of the lipid transporters and log Kow of the OPEs could be charged to the uptake, translocation and accumulation of the OPEs; however, these three factors played various important roles in roots and shoots. In detail, the effect of gene expression and binding affinity were stronger than log Kow in roots uptake and accumulation, but the result was the opposite in the shoots translocation. Transporters OsTIL and OsLTPL1 among all investigated transporters could play key roles in transporter-mediated OPE uptake, translocation and accumulation in the roots and shoots. OsMLP could be involved in the bidirected vertical translocation of the OPEs. OsLTP2 and OsLTP4 mainly acted as transporters of the OPEs in roots.

Genetic analysis of the rice jasmonate receptors reveals specialized functions for OsCOI2.

COI1-mediated perception of jasmonate is critical for plant development and responses to environmental stresses. Monocots such as rice have two groups of COI genes due to gene duplication: OsCOI1a and OsCOI1b that are functionally equivalent to the dicotyledons COI1 and OsCOI2 whose function remains unclear. In order to assess the function of OsCOI2 and its functional redundancy with COI1 genes, we developed a series of rice mutants in the 3 genes OsCOI1a, OsCOI1b and OsCOI2 by CRISPR Cas9-mediated editing and characterized their phenotype and responses to jasmonate. Characterization of OsCOI2 uncovered its important roles in root, leaf and flower development. In particular, we show that crown root growth inhibition by jasmonate relies on OsCOI2 and not on OsCOI1a nor on OsCOI1b, revealing a major function for the non-canonical OsCOI2 in jasmonate-dependent control of rice root growth. Collectively, these results point to a specialized function of OsCOI2 in the regulation of plant development in rice and indicate that sub-functionalisation of jasmonate receptors has occurred in the monocot phylum.

Arabidopsis NOTCHLESS plays an important role in root and embryo development

ABSTRACT Ribosome biogenesis is a fundamental process in eukaryotic cells. NOTCHLESS (NLE) is involved in 60S ribosome biogenesis in yeast, but its role in Arabidopsis (A. thaliana) remains exclusive. Here, we found that Arabidopsis NLE (AtNLE) is highly conservative in phylogeny, which encoding a WD40-repeat protein. AtNLE is expressed in actively dividing tissues. AtNLE-GFP is localized in the nucleus. AtNLE physically interacts with the MIDAS domain of AtMDN1, a protein involved in the biogenesis of the 60S ribosomal subunit in Arabidopsis. The underexpressing mutant nle-2 shows short roots and reduced cell number in the root meristem. In addition, the null mutant nle-1 is embryo lethal, and defective embryos are arrested at the early globular stage. This work suggests that AtNLE interacts with AtMDN1, and AtNLE functions in root and embryo development.

Uptake and translocation of fungicide picarbutrazox in greenhouse cabbage: the significance of translocation factors and home processing.

This study evaluated the uptake and translocation of the fungicide picarbutrazox (PBZ) and its isomer in greenhouse cabbage. Two distinct treatments, including foliar spray and soil application of PBZ, were used in this study. In the foliar application, the fungicide was sprayed thrice at intervals of 7days from 30, 21, and 14days before harvest following the OECD guidelines of fungicides in crops, whereas in soil treatment, PBZ was applied for one time at concentrations of 2 and 10mg/kg, and cabbage was cultivated for 68days. Additionally, the role of root and translocation factors during residual fungicide distribution was demonstrated. The quality control of the analytical study exhibited excellent linearity (R2 ≥ 0.99), the limit of quantification (LOQ 0.005mg/kg), accuracy (recovery within the range of 70-120%), and precision (relative coefficient within 0.3-13.8%) for studied PBZ and its metabolites. In the foliar application, initially higher amount of residual PBZ was evident in the outermost leaf of the cabbage, whereas in soil treatment, the highest residual PBZ was observed in the soil and roots. Therefore, the application method of picarbutrazox is a critical factor for defining the initial entry route of pesticides and the subsequent translocations through the investigated crops.

The Role of Roots, Stems, and Leaves in Plant Function: Structural and Physiological Perspectives for Optimized Plant Growth

Background: Plants, being autotrophic organisms, rely on various organs for the processes of growth, survival, and reproduction. Among these, roots, stems, and leaves play pivotal roles. Understanding their functions and interactions is essential for advancements in botany and agriculture. Methods: This study employs physiological assessments of plant growth under controlled environments to analyze the contributions of roots, stems, and leaves. Using different plant species, data were collected on nutrient uptake, photosynthetic efficiency, and overall plant health. Techniques such as gas exchange measurement, microscopy, and histological analysis were used to assess these organs' functionality. Results: The results demonstrated that roots are crucial for water and nutrient absorption, while stems facilitate transportation of these elements. Leaves were found to be highly efficient at photosynthesis, contributing to carbohydrate production. Plants with enhanced root systems showed significant growth and better adaptation to varying environmental conditions, while plants with compromised leaf structures exhibited reduced growth due to insufficient photosynthesis. The role of stems as structural support and transportation conduits was emphasized in fast-growing species. Conclusion: Roots, stems, and leaves exhibit complementary functions that are vital for plant survival. Their optimal performance is essential for the plant’s ability to adapt, thrive, and produce. These insights contribute to improving plant health and optimizing agricultural practices.

Sorghum WRKY transcription factor SbWRKY45 enhanced seed germination under drought stress in transgenic Arabidopsis

The WRKY transcription factors (TFs) family is an important family of plant-specific TFs, playing vital roles in various abiotic and biotic stress responses. WRKY TFs are gaining considerable attention due to their significant roles in stress responses. However, their functions in sorghum (Sorghum bicolor) are lagging behind. In this study, a WRKY gene designated as SbWRKY45 was isolated and characterized from sorghum. SbWRKY45, belonging to Group IIa, consists of one intron and two exons and encodes 430 amino acids. SbWRKY45 is located in chromosome 4. The cis-element prediction analysis showed that the promoter region of SbWRKY45 has several abiotic stress-associated elements. The qRT-PCR results showed that SbWRKY45 was significantly up-regulated in response to drought and cold under salt treatments, was notably changed, and was induced weakly under heat stress. SbWRKY45 exhibited a response to stress in different sorghum tissues, including leaves, stems, and roots. A tissue-specific expression pattern showed that SbWRKY45 was highly expressed in roots compared with leaves and stems, suggesting that SbWRKY45 may play an important role in roots. Overexpression of SbWRKY45 increased germination rates and promoted root growth in transgenic Arabidopsis under drought stress. Taken together, our findings indicate that SbWRKY45 may be involved in mediating the response to drought stress and play a vital role in the abiotic stress response of sorghum

CRISPR/Cas9-Engineered Large Fragment Deletion Mutations in Arabidopsis CEP Peptide-Encoding Genes Reveal Their Role in Primary and Lateral Root Formation.

C-TERMINALLY ENCODED PEPTIDEs (CEPs) are post-translationally modified peptides that play essential roles in root and shoot development, nitrogen absorption, nodule formation and stress resilience. However, it has proven challenging to determine biological activities of CEPs because of difficulties in obtaining loss-of-function mutants for these small genes. To overcome this challenge, we thus assembled a collection of easily detectable large fragment deletion mutants of Arabidopsis CEP genes through the clustered regularly interspaced short palindromic repeat/CRISPR-associated protein 9-engineered genome editing. This collection was then evaluated for the usability by functionally analyzing the Arabidopsis growth and development with a focus on the root. Most cep mutants displayed developmental defects in primary and lateral roots showing an increased primary root length and an enhanced lateral root number, demonstrating that the genetic resource provides a useful tool for further investigations into the roles of CEPs.

Impact of Root Distribution Characteristics on the Overturning Resistance of Leucaena leucocephala Forest in Debris-Flow Accumulation Area, Dawazi Gully, Yunnan, China

Tree resistance to overturning is crucial in forestry hazard applications and management. Tree anchorage varies considerably with species, tree age, and site conditions. We investigate the relationship between the root characteristics of the overturning slip surface and the role of roots (regarding different diameters in overturning). Four Leucaena leucocephala were fully excavated by a quadrate monolith to establish root distribution characteristics, and 19 L. leucocephala were uprooted until the trees completely overturned to measure the anchoring resistance to overturning. A model was developed to improve the descriptions of root characteristics in the mechanical processes for tree overturning. The results show that the distribution characteristics of the root system were well described by the model. For the root–soil plate radius, the thickest root diameter and the root biomass of different diameters at the overturning slip surface increased with the diameter at the breast height. The root biomass affected the strength of the overturning slip surface; the root density may be a key factor in identifying the location of the overturning slip surface. The model could predict the overturning moment of most overturned trees; although it overestimated the overturning moment for small diameters at breast height trees, the results will be useful for understanding the influence of root distribution characteristics in overturning.

MYB Transcription Factors Becoming Mainstream in Plant Roots.

The function of the root system is crucial for plant survival, such as anchoring plants, absorbing nutrients and water from the soil, and adapting to stress. MYB transcription factors constitute one of the largest transcription factor families in plant genomes with structural and functional diversifications. Members of this superfamily in plant development and cell differentiation, specialized metabolism, and biotic and abiotic stress processes are widely recognized, but their roles in plant roots are still not well characterized. Recent advances in functional studies remind us that MYB genes may have potentially key roles in roots. In this review, the current knowledge about the functions of MYB genes in roots was summarized, including promoting cell differentiation, regulating cell division through cell cycle, response to biotic and abiotic stresses (e.g., drought, salt stress, nutrient stress, light, gravity, and fungi), and mediate phytohormone signals. MYB genes from the same subfamily tend to regulate similar biological processes in roots in redundant but precise ways. Given their increasing known functions and wide expression profiles in roots, MYB genes are proposed as key components of the gene regulatory networks associated with distinct biological processes in roots. Further functional studies of MYB genes will provide an important basis for root regulatory mechanisms, enabling a more inclusive green revolution and sustainable agriculture to face the constant changes in climate and environmental conditions.

Light-emitting Diode–Induced Root Photomorphogenesis and Root Retention in Populus

Light-emitting diodes (LEDs) are known to affect plant morphology. In this study, we examined the relationship between changes in stem and root morphology in Populus sieboldii × Populus grandidentata induced by irradiation with blue (450 nm), red (630 nm), and white (combination of red, blue, and green; 525 nm) LED lights. Populus samples were reared for 36–55 days in separate LED incubators, and changes in their appearance were observed. After rearing, the main stem of each seedling was cut, leaving a section of stem extending from the roots to ≈20 mm above the medium surface; this part was used for tensile testing. The tensile tests were performed to clarify the relationship between the tensile force and displacement until 100 mm. Irradiation with blue light produced the tallest seedlings. The highest dry weight (root and stem) and largest stem diameter were obtained under red light. The results of the tensile tests showed that the work required to displace seedlings 100 mm was highest in plants reared under red light, followed by white and blue light. Numerous root branches developed under red light, and taproots were longest in saplings reared under blue light. The observed differences in root system morphology that were induced by rearing under light of different wavelengths were reflected in the tensile force required to extract the trees from the medium. The morphological changes observed in roots are important given the role of roots in forests after landslides, earthquakes, and other disruptions.

Monogalactosyl diacylglycerol synthase 3 affects phosphate utilization and acquisition in rice.

Galactolipids are essential to compensate for the loss of phospholipids by 'membrane lipid remodelling' in plants under phosphorus (P) deficiency conditions. Monogalactosyl diacylglycerol (MGDG) synthases catalyse the synthesis of MGDG which is further converted into digalactosyl diacylglycerol (DGDG), later replacing phospholipids in the extraplastidial membranes. However, the roles of these enzymes are not well explored in rice. In this study, the rice MGDG synthase 3 gene (OsMGD3) was identified and functionally characterized. We showed that the plant phosphate (Pi) status and the transcription factor PHOSPHATE STARVATION RESPONSE 2 (OsPHR2) are involved in the transcriptional regulation of OsMGD3. CRISPR/Cas9 knockout and overexpression lines of OsMGD3 were generated to explore its potential role in rice adaptation to Pi deficiency. Compared with the wild type, OsMGD3 knockout lines displayed a reduced Pi acquisition and utilization while overexpression lines showed an enhancement of the same. Further, OsMGD3 showed a predominant role in roots, altering lateral root growth. Our comprehensive lipidomic analysis revealed a role of OsMGD3 in membrane lipid remodelling, in addition to a role in regulating diacylglycerol and phosphatidic acid contents that affected the expression of Pi transporters. Our study highlights the role of OsMGD3 in affecting both internal P utilization and P acquisition in rice.

The Effects of Suaeda salsa/Zea mays L. Intercropping on Plant Growth and Soil Chemical Characteristics in Saline Soil

Halophytes possess the capacity to uptake high levels of salt through physiological processes and their root architecture. Here, we investigated whether halophyte/non-halophyte intercropping in saline soil benefits plant growth and contains root-dialogue between interspecific species. Field and pot experiments were conducted to determine the plant biomasses and salt and nutrient distributions in three suaeda (Suaeda salsa)/maize (Zea mays L.) intercropping systems, set up by non-barrier, nylon-barrier, and plastic-barrier between plant roots. The suaeda/maize intercropping obviously transferred more Na+ to the suaeda root zone and decreased salt and Na+ contents. However, the biomass of the non-barrier-treated maize was significantly lower than that of the nylon and plastic barrier-treated maize. There was lower available N content in the soil of the non-barrier treated groups compared with the plastic barrier-treated groups. In addition, the pH was lower, and the available nutrient content was higher in the nylon barrier, which suggested that rhizospheric processes might occur between the two species. Therefore, we concluded that the suaeda/maize intercropping would be beneficial to the salt removal, but it caused an adverse effect for maize growth due to interspecific competition, and also revealed potential rhizospheric effects through the role of roots. This study provides an effective way for the improvement of saline land.

Identification, evolutionary analysis and functional diversification of RAV gene family in cotton (G. hirsutum L.).

Genome wide analysis, expression pattern analysis, and functional characterization of RAV genes highlight their roles in roots, stem development and hormonal response. RAV (Related to ABI3 and VP1) gene family members have been involved in tissues/organs growth and hormone signaling in various plant species. Here, we identified 247 RAVs from 12 different species with 33 RAV genes from G. hirsutum. Phylogenetic analysis classified RAV genes into four distinct groups. Analysis of gene structure showed that most GhRAVs lack introns. Motif distribution pattern and protein sequence logos indicated that GhRAV genes were highly conserved during the process of evolution. Promotor cis-acting elements revealed that promotor regions of GhRAV genes encode numerous elements related to plant growth, abiotic stresses and phytohormones. Chromosomal location information showed uneven distribution of 33 GhRAV genes on different chromosomes. Collinearity analysis identified 628 and 52 orthologous/ paralogous gene pairs in G. hirsutum and G. barbadense, respectively. Ka/Ks values indicated that GhRAV and GbRAV genes underwent strong purifying selection pressure. Selecton model and codon model selection revealed that GhRAV amino acids were under purifying selection and adaptive evolution exists among GhRAV proteins. Three dimensional structure of GhRAVs indicated the presence of numerous alpha helix and beta-barrels. Expression level revealed that some GhRAV genes exhibited high expression in roots (GhRAV3, GhRAV4, GhRAV11, GhRAV18, GhRAV20 and GhRAV30) and stem (GhRAV3 and GhRAV18), indicating their potential role in roots and stem development. GhRAV genes can be regulated by phytohormonal stresses (BL, JA and IAA). Our study provides a reference for future studies related to the functional analysis of GhRAVs in cotton.

Effect of root‐glomalin on soil carbon storage in trees' rhizosphere and interspace of a tropical dry forest

AbstractIncreasing soil organic carbon (SOC) concentration is a desirable aspect of afforestation. Glomalin‐related soil protein (GRSP) is a ubiquitous component of SOC, preferentially produced by arbuscular mycorrhizal fungi (AMF) during symbiotic association with the plant roots. Although the role of AMF in GRSP production is well established, the role of root in GRSP production is not yet clear. Hence, we aimed to assess the glomalin in different tree roots (i.e., glomalin‐related root protein; GRRP) and its influence on GRSP and SOC storage in trees’ rhizosphere and interspace. The experiment was conducted in a tropical dry forest (India) with six native trees (Hardwickia binata, Lagerstroemia parviflora, Diospyros melanoxylon, Terminalia tomentosa, Shorea robusta, and Anogeissus latifolia) and a planted Teak (Tectona grandis). The fine roots (from the rhizosphere) and topsoils (0–15 cm) were collected from the rhizosphere and interspace of each tree. We found GRRP concentration varying between trees, with higher values observed in the roots of native trees than those of Teak. The AMF colonization was positively correlated with GRRP (r2 = 0.88), and GRRP positively correlated with GRSP and SOC. The higher correlation of GRRP was observed with GRSP (r2 = 0.70–0.79) compared with SOC (r2 = 0.56–0.58), while the correlation was much stronger between GRSP and SOC (r2 = 0.91). These results indicate that GRRP influences SOC storage via mediating GRSP concentration. We suggest that GRRP can be used as an indicator for species screening during afforestation with the aim to improve SOC storage on an afforested landscape.