Abstract Hepatocellular carcinoma (HCC) is one of the commonest and deadliest cancers worldwide with a striking gender prevalence observed in men. Androgen receptor (AR) is a ligand-activated nuclear receptor that regulates the development of male sexual phenotype. Aberrant AR signaling, however, has detrimental consequences in the development of male-predominant cancers. Using genome-wide location analysis, we have recently uncovered cell cycle-related kinase (CCRK) as an AR direct transcriptional target that drives aberrant hepatocellular proliferation and tumorigenicity through β-catenin/T cell factor signaling (Feng et al. 2011). We also found that the Polycomb protein EZH2 promotes β-catenin-dependent hepatocarcinogenesis through concordant repression of Wnt antagonists via histone H3 lysine 27 trimethylation (Cheng et al. 2011). Recent studies have revealed the Polycomb-independent role of EZH2 in gene activation via AKT-mediated phosphorylation, however, the regulation and signaling network of EZH2 in HCC are poorly-understood. Here we show that the AR-regulated kinase CCRK activates a tumor-initiating circuitry by dual regulation of EZH2. Activation of CCRK phosphorylates glycogen synthase kinase 3β (GSK-3β) and AKT leading to transcriptional up-regulation and phosphorylation of EZH2 at Ser21 (pEZH2Ser9), respectively. pEZH2Ser9 in turn physically interacts with AR and cooperatively activate CCRK transcription via direct binding to the CCRK promoter, thus forming a feedback circuitry. In a chemical-induced murine HCC model, activation of the AR/CCRK/EZH2 regulatory loop precedes HCC formation, which is significantly reduced (>80%) by lentiviral-mediated knockdown of CCRK. In human HCC tissues, these proteins are highly up-regulated, starting from the adjacent precancerous liver tissues. Most importantly, hyper-activation of this loop is significantly associated with shorter overall (p<0.0001) and disease-free survival rates (p<0.01) of the HCC patients. This study not only advances our fundamental understanding of the gender disparity in HCC, but also provides a new paradigm for nuclear receptor regulation of cancer epigenome. Elucidating the detailed signaling network of AR/CCRK/EZH2 will lead to the discovery and development of targeted therapies tailored to inhibit cancer-specific pathways. This study was supported by a CUHK Focused Investments Scheme - Scheme B (fis1112/0674/12yc), a National Natural Science Foundation of China (373492), a Health and Medical Research Fund (12110532) and a General Research Fund (462710).