This research is proposed to determine the impact of management on supply chain performance. A description analysis on each indicator’s constituent variables also carried out. Data obtained from farmer groups (Poktan), combined farmer groups (Gapoktan), organic rice farmer associations, distributors and retailers consisting of modern markets, supermarkets, and minimarkets were selected using snowball sampling method. A questionnaire was utilized to determine the perceptions of respondents. The limitation of the study was the involvement of only one area of certified organic rice producer, and several distributors and retailers who engaged in the organic sector following the supply chain flow. The analysis using partial least squares structural equation modelling obtained that the integration of suppliers has a positive significance on efficiency, responsiveness, flexibility, quality, and economic satisfaction, but it does not affect social satisfaction. Internal integration only significantly influences to quality. The integration of customer has a positive importance on efficiency, responsiveness, flexibility, and social satisfaction, but it does not affect the quality and economic satisfaction. Meanwhile, information sharing has a positive effect on economic and social satisfaction, but it does not affect efficiency, responsiveness, flexibility, and quality. Supplier integration was found to be a significant factor in supply chain management practices in influencing supply chains performance. This study authenticity is the use of measurement constructs that are adapted to conditions in the field to produce new empirical data about the relationship of management practices with supply chain performance in the certified organic rice products.