Rhizobium Leguminosarum Bv Research Articles

Red clover root-associated microbiota is shaped by geographic location and choice of farming system.

This study evaluated the red clover (Trifolium pratense) root-associated microbiota to clarify the presence of pathogenic and beneficial microorganisms in 89 Swedish field sites. 16S rRNA and ITS amplicon sequencing analysis were performed on DNA extracted from the red clover root samples collected to determine the composition of the prokaryotic and eukaryotic root-associated microbe communities. Alpha and beta diversities were calculated and relative abundance of various microbial taxa and their co-occurrence were analyzed. Rhizobium was the most prevalent bacterial genus, followed by Sphingomonas, Mucilaginibacter, Flavobacterium, and the unclassified Chloroflexi group KD4-96. The Leptodontidium, Cladosporium, Clonostachys, and Tetracladium fungal genera known for endophytic, saprotrophic, and mycoparasitic lifestyles were also frequently observed in all samples. Sixty-two potential pathogenic fungi were identified with a bias toward grass pathogens and a higher abundance in samples from conventional farms. We showed that the microbial community was mainly shaped by geographic location and management procedures. Co-occurrence networks revealed that the Rhizobiumleguminosarum bv. trifolii was negatively associated with all fungal pathogenic taxa recognized in this study.

Influence of Bacterial Mutualists and Phytopatogenes on Changes in Concentrations of cAMP and H<sub>2</sub>O<sub>2</sub> in Pea Seedles of Rondo Varieties and its Clutterless and Superclub Mutants

Changes in the concentrations of hydrogen peroxide and cyclic adenosine monophosphate (cAMP) in the roots of seedlings of pea cv. Rondo and its supernodulating mutant Nod3 and anodulating K14 were studied during infection with Rhizobium leguminosarum bv. vicea (strain RCAM 1022) or Pseudomonas syringae pv. pisi (strain 1845). It was shown that 360 min after infection of pea seedlings of the Rondo variety, the level of endogenous hydrogen peroxide slightly differed from the control. In the roots of Nod3 seedlings, this level significantly decreased, and in the roots of K14 it significantly increased when infected with the 1845 strain, but remained unchanged when exposed to bacteria of the RCAM 1022 strain. and young root hairs of Rondo seedlings, while strain 1845 had no effect on this parameter. Both types of bacteria had no effect on the concentration of cAMP in the roots of seedlings of the Nod3 mutant, whereas in K14, under the influence of RCAM 1022, the cAMP level almost doubled, and under the influence of 1845, it decreased. It is assumed that hydrogen peroxide and cAMP may be involved in the formation of supernodulating and nodulating phenotypes of mutants, as well as in the formation of resistance to a specific pathogen, Pseudomonas syringae pv. pisi. It is possible that this phenomenon can be used to diagnose the resistance of newly created mutants and pea varieties to the blight pathogen.

Exopolysaccharide Biosynthesis in Rhizobium leguminosarum bv. trifolii Requires a Complementary Function of Two Homologous Glycosyltransferases PssG and PssI.

The Pss-I region of Rhizobium leguminosarum bv. trifolii TA1 comprises more than 20 genes coding for glycosyltransferases, modifying enzymes, and polymerization/export proteins, altogether determining the biosynthesis of symbiotically relevant exopolysaccharides. In this study, the role of homologous PssG and PssI glycosyltransferases in exopolysaccharide subunit synthesis were analyzed. It was shown that the glycosyltransferase-encoding genes of the Pss-I region were part of a single large transcriptional unit with potential downstream promoters activated in specific conditions. The ΔpssG and ΔpssI mutants produced significantly lower amounts of the exopolysaccharide, while the double deletion mutant ΔpssIΔpssG produced no exopolysaccharide. Complementation of double mutation with individual genes restored exopolysaccharide synthesis, but only to the level similar to that observed for the single ΔpssI or ΔpssG mutants, indicating that PssG and PssI serve complementary functions in the process. PssG and PssI interacted with each other in vivo and in vitro. Moreover, PssI displayed an expanded in vivo interaction network comprising other GTs involved in subunit assembly and polymerization/export proteins. PssG and PssI proteins were shown to interact with the inner membrane through amphipathic helices at their C-termini, and PssG also required other proteins involved in exopolysaccharide synthesis to localize in the membrane protein fraction.

The Effects of Exogenous IAA and BAP on the Metabolism of the Adhesion Zone Cells in Pea Seedling Roots (Pisum sativum L.) in the Initial Periods of Interaction with Rhizobium leguminosarum bv. viceae

The Effects of Exogenous IAA and BAP on the Metabolism of the Adhesion Zone Cells in Pea Seedling Roots (Pisum sativum L.) in the Initial Periods of Interaction with Rhizobium leguminosarum bv. viceae

Screening and field evaluation of white clover rhizobia for New Zealand pastures

Context Biological nitrogen (N) fixation through the rhizobia–legume symbiosis is a sustainable and cost-effective source of N for agriculture. In New Zealand (NZ), white clover (Trifolium repens) is a key component of pastures and rhizobial inoculation of clover is widely used. The current commercial inoculant for white clover, TA1, was isolated in Australia in the 1950s and may not be the best partner for modern white clover cultivars. Aims To identify Rhizobium leguminosarum bv. trifolii (Rlt) isolates suitable for use in NZ pastures. Methods The symbiotic potential of >230 isolates collected from throughout NZ was evaluated in plant bioassays. Selected isolates were further evaluated in pot and field trials. Key results Approximately 40% of NZ isolates supported better clover growth than TA1 under N-limited conditions in vitro. Of 24 Rlt isolates evaluated in a glasshouse trial, five produced significantly higher clover biomass than TA1. Three (S11N9, S20N7, S4N6) of nine isolates evaluated in two field trials in 2018–2019 significantly increased clover growth (12–38%) compared with paired uninoculated clover at several harvests, whereas inoculation with TA1 did not improve yield. In a third trial in 2020, S11N9 and S20N7 increased clover growth compared with the uninoculated control at two of three harvests; S4N6 performed better than TA1 at one harvest. When tested with four white clover cultivars, five Rlt isolates had higher symbiotic potential than TA1. Conclusions Inoculating white clover would be beneficial if improved inoculant isolates were available. Implications We recommend some NZ Rlt isolates could be developed into commercial inoculants to improve white clover performance in NZ.

Rhizobium leguminosarum bv. viciae-Mediated Silver Nanoparticles for Controlling Bean Yellow Mosaic Virus (BYMV) Infection in Faba Bean Plants.

The faba bean plant (Vicia faba L.) is one of the world's most important legume crops and can be infected with various viral diseases that affect its production. One of the more significant viruses in terms of economic impact is bean yellow mosaic virus (BYMV). The current study used the molecularly identified Rhizobium leguminosarum bv. viciae strain 33504-Borg1, a nitrogen-fixing bacteria, to biosynthesize silver nanoparticles (AgNPs) to control BYMV disease in faba bean plants. Scanning electron microscopy (SEM), a particle size analyzer (PSA) with dynamic light scattering (DLS), transmission electron microscopy (TEM), energy dispersive X-ray spectroscopy (EDX), and Fourier transform infrared spectroscopy (FTIR) were used to characterize the prepared AgNPs. The DLS, SEM, and TEM analyses revealed that the AgNPs were spherical and rough, with sizes ranging from 13.7 to 40 nm. The FTIR analysis recognized various functional groups related to AgNP capping and stability. Under greenhouse conditions, spraying faba bean leaves with the AgNPs (100 µg/mL) 24 h before BYMV inoculation induced plant resistance and reduced plant disease severity and virus concentration levels. Contrarily, the AgNP treatment enhanced plant health by raising photosynthetic rates, increasing the fresh and dry weight of the faba bean plants, and increasing other measured metrics to levels comparable to healthy controls. Antioxidant enzymes (peroxidase and polyphenol oxidase) inhibited the development of BYMV in the faba bean plants treated with the AgNPs. The AgNPs decreased oxidative stress markers (H2O2 and MDA) in the faba bean plants. The plants treated with the AgNPs showed higher expression levels of PR-1 and HQT than the control plants. The study findings could be used to develop a simple, low-cost, and environmentally friendly method of protecting the faba bean plant from BYMV.

RopB protein of Rhizobium leguminosarum bv. viciae adopts amyloid state during symbiotic interactions with pea (Pisum sativum L.).

Amyloids represent protein aggregates with highly ordered fibrillar structure associated with the development of various disorders in humans and animals and involved in implementation of different vital functions in all three domains of life. In prokaryotes, amyloids perform a wide repertoire of functions mostly attributed to their interactions with other organisms including interspecies interactions within bacterial communities and host-pathogen interactions. Recently, we demonstrated that free-living cells of Rhizobium leguminosarum, a nitrogen-fixing symbiont of legumes, produce RopA and RopB which form amyloid fibrils at cell surface during the stationary growth phase thus connecting amyloid formation and host-symbiont interactions. Here we focused on a more detailed analysis of the RopB amyloid state in vitro and in vivo, during the symbiotic interaction between R. leguminosarum bv. viciae with its macrosymbiont, garden pea (Pisum sativum L.). We confirmed that RopB is the bona fide amyloid protein since its fibrils exhibit circular x-ray reflections indicating its cross-β structure specific for amyloids. We found that fibrils containing RopB and exhibiting amyloid properties are formed in vivo at the surface of bacteroids of R. leguminosarum extracted from pea nodules. Moreover, using pea sym31 mutant we demonstrated that formation of extracellular RopB amyloid state occurs at different stages of bacteroid development but is enhanced in juvenile symbiosomes. Proteomic screening of potentially amyloidogenic proteins in the nodules revealed the presence of detergent-resistant aggregates of different plant and bacterial proteins including pea amyloid vicilin. We demonstrated that preformed vicilin amyloids can cross-seed RopB amyloid formation suggesting for probable interaction between bacterial and plant amyloidogenic proteins in the nodules. Taken together, we demonstrate that R. leguminosarum bacteroids produce extracellular RopB amyloids in pea nodules in vivo and these nodules also contain aggregates of pea vicilin amyloid protein, which is able to cross-seed RopB fibrillogenesis in vitro. Thus, we hypothesize that plant nodules contain a complex amyloid network consisting of plant and bacterial amyloids and probably modulating host-symbiont interactions.

A serralysin-like protein of Candidatus Liberibacter asiaticus modulates components of the bacterial extracellular matrix.

Huanglongbing (HLB), the current major threat for Citrus species, is caused by intracellular alphaproteobacteria of the genus Candidatus Liberibacter (CaL), with CaL asiaticus (CLas) being the most prevalent species. This bacterium inhabits phloem cells and is transmitted by the psyllid Diaphorina citri. A gene encoding a putative serralysin-like metalloprotease (CLIBASIA_01345) was identified in the CLas genome. The expression levels of this gene were found to be higher in citrus leaves than in psyllids, suggesting a function for this protease in adaptation to the plant environment. Here, we study the putative role of CLas-serralysin (Las1345) as virulence factor. We first assayed whether Las1345 could be secreted by two different surrogate bacteria, Rhizobium leguminosarum bv. viciae A34 (A34) and Serratia marcescens. The protein was detected only in the cellular fraction of A34 and S. marcescens expressing Las1345, and increased protease activity of those bacteria by 2.55 and 4.25-fold, respectively. In contrast, Las1345 expressed in Nicotiana benthamiana leaves did not show protease activity nor alterations in the cell membrane, suggesting that Las1345 do not function as a protease in the plant cell. Las1345 expression negatively regulated cell motility, exopolysaccharide production, and biofilm formation in Xanthomonas campestris pv. campestris (Xcc). This bacterial phenotype was correlated with reduced growth and survival on leaf surfaces as well as reduced disease symptoms in N. benthamiana and Arabidopsis. These results support a model where Las1345 could modify extracellular components to adapt bacterial shape and appendages to the phloem environment, thus contributing to virulence.

Influence of endophytic and epiphytic nitrogen-fixing bacteria on the content of negative allelopathic compounds in root exudates of pea (<i>Pisum sativum</i> L.) seedlings

Substances that have a harmful effect on living organisms include N-phenyl-2-naphthalamine and phthalates, which are synthesized and widely used in the chemical industry. At the same time, N-phenyl-2-naphthylamine was found in the aerial parts and in the roots of some plant species, phthalates were found in many plant species and in bacteria. The aim of this research was to study the protective (antimicrobial) reaction of pea (Pisum sativum L.) seedlings of the Torsdag variety to the inoculation with bacteria Rhizobium leguminosarum bv. viceae (endosymbiont) and Azotobacter chroococcum (ectosymbiont) introduced into the aqueous medium of root growth were studied. Changes in the content of negative allelopathic compounds (pisatin, N-phenyl-2-naphthylamine, phthalates) in root exudates were the reaction indicators. After the inoculation, the seedlings grew for 24 h in the BINDER KBW-240 chamber at 21 °C, with lighting of 81 μM.m-2 . sec-1 and a 16/8 h day/night photoperiod. In ethyl acetate extracts from the aqueous medium where the seedling roots were immersed, the content of the compounds was determined by HPLC, while changes in the composition and ratio of phthalates were determined by GC-MS. Data indicating the different ability of both bacterial species to degrade N-phenyl-2-naphthylamine to phthalates and the dependence of this process activity in the bacteria studied on its concentration in the medium were presented. N-phenyl-2-naphthylamine differently but negatively affected the viability and growth of the bacteria used in the experiments. A different effect of rhizobia and azotobacter on the content of the above named compounds and on the ratio of types of phthalates in root exudates was elicited.

Carbohydrate utilization by belowground organs defines the capacity of faba bean to exploit organic phosphorus sources

AbstractBackgroundLimited phosphate (Pi) reserves and the economic and adverse environmental impacts of excessive application of mineral fertilizers in soils are alarming. Therefore, the use of organic phosphorus (Porg) is suggested to reduce reliance on chemical fertilizers.AimsThere is currently little information regarding the accessibility of Porg to N2 fixation plants. Therefore, the present study aims to address the question of to what extent Porg substrates can serve as reliable sources of phosphorus (P) for faba bean in its nodulated phase. Specifically, we intended to explore whether N2‐fixing plants employ intrinsic mechanisms to facilitate Porg availability.MethodsA pot experiment was conducted to assess the inherent capacity of two faba bean varieties (Tiffany vs. Mallory) to utilize Porg supplied as phytic acid and Ca‐glycerophosphate. Plants were inoculated with Rhizobium leguminosarum bv. viciae 3841 strain and cultivated on sterilized loamy sand under greenhouse conditions.ResultsPhytic acid was relatively less efficient than Ca‐glycerophosphate in sustaining plant growth. Compared to Mallory, the variety Tiffany displayed a higher capability to use Porg, as evidenced by the relatively higher biomass production, nodulation, phosphorus use efficiency, and P‐ and N‐accumulations in plant tissues. Porg exploitation was intimately linked to the efficient utilization of the host's carbohydrate budget into nutrient‐acquiring structures (roots and nodules). In addition, the preferential allocation of Pi to prolific nodules is essential for plants to thrive best under these circumstances.ConclusionsTogether with N profitability, these findings suggested that N2‐fixing plants (e.g., faba bean) can promote the sustainable exploitation of Porg, thereby diminishing the sizeable environmental footprint.

Enhancing systemic resistance in faba bean (Vicia faba L.) to Bean yellow mosaic virus via soil application and foliar spray of nitrogen-fixing Rhizobium leguminosarum bv. viciae strain 33504-Alex1.

Rhizobium spp. manifests strong nitrogen fixation ability in legumes. However, their significance as biocontrol agents and antivirals has rarely been investigated. Under greenhouse conditions, the molecularly identified nitrogen-fixing plant growth-promoting rhizobacteria (PGPR), Rhizobium leguminosarum bv. viciae strain 33504-Alex1, isolated from the root nodules of faba bean plants, was tested as a soil inoculum or a foliar application to trigger faba bean plants’ resistance against Bean yellow mosaic virus (BYMV) infection. Compared to the non-treated faba bean plants, the applications of 33504-Alex1 in either soil or foliar application significantly promoted growth and improved total chlorophyll content, resulting in a considerable reduction in disease incidence and severity and the inhibition index of BYMV in the treated faba bean plants. Furthermore, the protective activities of 33504-Alex1 were associated with significant reductions in non-enzymatic oxidative stress markers [hydrogen peroxide (H2O2) and malondialdehyde (MDA)] and remarkably increased DPPH free radical scavenging activity and total phenolic content compared to the BYMV treatment at 20 days post-inoculation. Additionally, an increase in reactive oxygen species scavenging enzymes [superoxide dismutase (SOD) and polyphenol oxidase (PPO)] and induced transcriptional levels of pathogenesis-related (PR) proteins (PR-1, PR-3, and PR-5) were observed. Of the 19 polyphenolic compounds detected in faba bean leaves by high-performance liquid chromatography (HPLC) analysis, gallic and vanillic acids were completely shut down in BYMV treatment. Interestingly, the 33504-Alex1 treatments were associated with the induction and accumulation of the most detected polyphenolic compounds. Gas chromatography-mass spectrometry (GC-MS) analysis showed hexadecanoic acid 2,3-dihydroxypropyl ester, tetraneurin-A-Diol, oleic acid, and isochiapin B are the major compounds in the ethyl acetate extract of 33504-Alex1 culture filtrate (CF), suggesting it acts as an elicitor for the induction of systemic acquired resistance (SAR) in faba bean plants. Consequently, the capacity of R. leguminosarum bv. viciae strain 33504-Alex1 to enhance plant growth and induce systemic resistance to BYMV infection will support the incorporation of 33504-Alex1 as a fertilizer and biocontrol agent and offer a new strategy for crop protection, sustainability, and environmental safety in agriculture production.

Rhizobium leguminosarum bv. trifolii exopolysaccharide and sunflower husk biochar as factors affecting immobilization of both tetracycline and Cd2+ ions on soil solid phase

Rhizobium leguminosarum bv. trifolii exopolysaccharide and sunflower husk biochar as factors affecting immobilization of both tetracycline and Cd2+ ions on soil solid phase

An Alliance of Trifolium repens-Rhizobium leguminosarum bv. trifolii-Mycorrhizal Fungi From an Old Zn-Pb-Cd Rich Waste Heap as a Promising Tripartite System for Phytostabilization of Metal Polluted Soils.

The Bolesław waste heap in South Poland, with total soil Zn concentrations higher than 50,000 mg kg–1, 5,000 mg Pb kg–1, and 500 mg Cd kg–1, is a unique habitat for metallicolous plants, such as Trifolium repens L. The purpose of this study was to characterize the association between T. repens and its microbial symbionts, i.e., Rhizobium leguminosarum bv. trifolii and mycorrhizal fungi and to evaluate its applicability for phytostabilization of metal-polluted soils. Rhizobia originating from the nutrient-poor waste heap area showed to be efficient in plant nodulation and nitrogen fixation. They demonstrated not only potential plant growth promotion traits in vitro, but they also improved the growth of T. repens plants to a similar extent as strains from a non-polluted reference area. Our results revealed that the adaptations of T. repens to high Zn-Pb-Cd concentrations are related to the storage of metals predominantly in the roots (excluder strategy) due to nodule apoplast modifications (i.e., thickening and suberization of cell walls, vacuolar storage), and symbiosis with arbuscular mycorrhizal fungi of a substantial genetic diversity. As a result, the rhizobia-mycorrhizal fungi-T. repens association appears to be a promising tool for phytostabilization of Zn-Pb-Cd-polluted soils.

A rhizobial non-coding RNA has an effect on symbiotic nodulation by regulating an ABC transporter

Rhizobium leguminosarum has been widely used as a model to study nodule biochemistry, its genomic sequence has been published. We screened the Rhizobium leguminosarum bv. viciae 3841 genome sequence using a bioinformatics analysis for discovering potential small non-coding RNAs. One of these identified non-coding RNAs, cis-encoded antisense RLS1, was found to affect the symbiotic nodulation and nitrogen fixation. The mature form of RLS1 was 258 nt of non-coding RNA, its disruption mutant strain (△RLS1) caused that the nodulation stages were delayed dramatically and the total number of nodules decreased, leading to a 25% reduction in the total amount of nitrogen fixed in the symbiotic system of Rhizobium- Pisum sativum, compared with wild-type strain. RLS1 targets an ABC transporter mRNA, bind to Hfq in vitro, and to be stable in the absence of Hfq. Further analysis showed that Hfq is not required for interactions between RLS1 and its target mRNAs. △RLS1 strain exhibited that its production of extracellular polysaccharide (EPS) was over three times higher than in wild-type strain. The findings suggest that RLS1 might affect nodulation by participating in the regulatory network for EPS accurate secretion, playing a pivotal role in the infection process and in root nodule formation.

Post translational modifications of Trifolitoxin: a blue fluorescent peptide antibiotic

Trifolitoxin (TFX, C41H63N15O15S) is a selective, ribosomally-synthesized, post-translationally modified, peptide antibiotic, produced by Rhizobium leguminosarum bv. trifolii T24. TFX specifically inhibits α-proteobacteria, including the plant symbiont Rhizobium spp., the plant pathogen Agrobacterium spp. and the animal pathogen Brucella abortus. TFX-producing strains prevent legume root nodulation by TFX-sensitive rhizobia. TFX has been isolated as a pair of geometric isomers, TFX1 and TFX2, which are derived from the biologically inactive primary amino acid sequence: Asp-Ile-Gly-Gly-Ser-Arg-Gln-Gly-Cys-Val-Ala. Gly-Cys is present as a thiazoline ring and the Arg-Gln-Gly sequence is extensively modified to a UV absorbing, blue fluorescent chromophore. The chromophore consists of a conjugated, 5-membered heterocyclic ring and side chain of modified glutamine.

Genome-Scale Metabolic Modelling of Lifestyle Changes in Rhizobium leguminosarum.

ABSTRACTBiological nitrogen fixation in rhizobium-legume symbioses is of major importance for sustainable agricultural practices. To establish a mutualistic relationship with their plant host, rhizobia transition from free-living bacteria in soil to growth down infection threads inside plant roots and finally differentiate into nitrogen-fixing bacteroids. We reconstructed a genome-scale metabolic model for Rhizobium leguminosarum and integrated the model with transcriptome, proteome, metabolome, and gene essentiality data to investigate nutrient uptake and metabolic fluxes characteristic of these different lifestyles. Synthesis of leucine, polyphosphate, and AICAR is predicted to be important in the rhizosphere, while myo-inositol catabolism is active in undifferentiated nodule bacteria in agreement with experimental evidence. The model indicates that bacteroids utilize xylose and glycolate in addition to dicarboxylates, which could explain previously described gene expression patterns. Histidine is predicted to be actively synthesized in bacteroids, consistent with transcriptome and proteome data for several rhizobial species. These results provide the basis for targeted experimental investigation of metabolic processes specific to the different stages of the rhizobium-legume symbioses.IMPORTANCE Rhizobia are soil bacteria that induce nodule formation on plant roots and differentiate into nitrogen-fixing bacteroids. A detailed understanding of this complex symbiosis is essential for advancing ongoing efforts to engineer novel symbioses with cereal crops for sustainable agriculture. Here, we reconstruct and validate a genome-scale metabolic model for Rhizobium leguminosarum bv. viciae 3841. By integrating the model with various experimental data sets specific to different stages of symbiosis formation, we elucidate the metabolic characteristics of rhizosphere bacteria, undifferentiated bacteria inside root nodules, and nitrogen-fixing bacteroids. Our model predicts metabolic flux patterns for these three distinct lifestyles, thus providing a framework for the interpretation of genome-scale experimental data sets and identifying targets for future experimental studies.

Immobilization mechanism of Cd2+/HCrO4-/CrO42- ions and carboxin on montmorillonite modified with Rhizobium leguminosarum bv. trifolii exopolysaccharide

The modification of clay minerals by exopolysaccharides (EPSs) may significantly increase their adsorption capacity. Therefore, this study focused on the impact of the EPS synthesised by the soil bacterium Rhizobium leguminosarum bv. trifolii on the adsorptive features of montmorillonite relative to two heavy metal ions (cadmium/Cd(II) and chromium/Cr(VI)) and a pesticide (carboxin). The characterization of montmorillonite was carried out using various methods: X-ray diffraction, X-ray photoelectron spectroscopy, Fourier-transform infrared spectroscopy, scanning electron microscopy. The adsorption/desorption data were modelled using theoretical equations (Langmuir-Freundlich, Redlich-Peterson, etc.). The obtained results showed that EPS promoted the accumulation of heavy metals on the clay mineral and, simultaneously, contributed to a lower degree of their desorption. This resulted from complexation between the biopolymer and the Cd(II)/Cr(VI) ions. After montmorillonite modification with 100 mg/L EPS, the maximum noted growth in Cd(II) adsorption was 26.10%, whereas it was 20.30% for Cr(VI). The adsorbed amounts of Cd(II) and Cr(VI) were then 24.24 and 14.45 mg/g, respectively. In the case of carboxin, the EPS effect on its adsorption/desorption rates was opposite – its adsorption level decreasing by 10.80%, was 0.27 mg/g. Thus, the presence of EPS-producing bacteria could reduce the bioavailability of the heavy metals, but not of the selected pesticide.

Selection and characterization of Spanish Trifolium-nodulating rhizobia for pasture inoculation

Identification of elite nitrogen-fixing rhizobia strains is a continuous and never ending effort, since new legume species can be cultivated in different agro systems or are introduced into new areas. This current study reports on the taxonomic affiliation and symbiotic proficiency of nine strains of Trifolium-nodulating rhizobia isolated from different pasture areas in Spain, as well as three Rhizobium leguminosarum bv. trifolii reference strains, on eleven Trifolium species. Based on 16S rRNA gene sequences the strains belonged to the R. leguminosarum species complex. Additional phylogenetic analyses of the housekeeping genes recA, atpD and rpoB showed the strains were closely related to the species R. leguminosarum, R. laguerreae, R. indicum, R. ruizarguesonis or R. acidisoli. In addition, three strains had no clear affiliation and could represent putative new species, although two of the reference strains were positioned close to R. ruizarguesonis. nodC gene phylogeny allowed the discrimination between strains isolated from annual or perennial Trifolium species and placed all of them in the symbiovar trifolii. Neither geographic origin nor host-plant species could be correlated with the taxonomic affiliation of the strains and a high degree of phenotypic diversity was found among this set of strains. The strong interaction of plant species with the rhizobial strains found for biological nitrogen fixation (BNF) was noteworthy, and allowed the identification of rhizobial strains with a maximum proficiency for certain trefoil species. Several strains showed high BNF potential with a wide range of clover species, which made them valuable strains for inoculant manufacturers and they would be particularly useful for inoculation of seed mixtures in natural or cultivated pastures.

Isolation and Characterization of Local Isolates of Rhizobia in Nineveh Governorate/Iraq

In this study, thirty-six local isolates of rhizobial bacteria were isolated from root nodes of different leguminous plants collected from different areas in Nineveh Governorate/Iraq. The rhizobial colonies were purified and their agronomic and biochemical characteristics were studied. Results of this study showed that the local isolates had the ability to consume different sugars as a carbon source. Also, the antibiotic sensitivity test showed that only one isolate, Rhizobium leguminosarum bv. phaseoli AS12 was resistant to the antibiotic Azithromycin 15 µg/ml, and the isolate Rhizobium leguminosarum bv. phaseoli AS14 showed resistance to the antibiotic Gentamycin 10 µg/ml, and the rest of the isolates showed different rates of resistance and sensitivity for the rest of the antibiotics. The local isolates showed different NaCl tolerance levels up to 8.0 %, while no tolerance was observed for Rhizobium leguminosarum bv. viciae AS11 isolate at any of the studied concentrations. Results of heavy metal salt tolerance study showed that the isolates of Ensifer meliloti AS34 and Rhizobium leguminosarum bv. viciae AS36 were sensitive to ZnSo4 at a concentration of 25 µg/ml, while the tolerability of the other isolates to the studied heavy salts differed at concentrations higher than 25 µg /ml. All the studied isolates showed a positive result in staining with Congo red and Aniline blue dyes. Maximum exopolysaccharide production was 494 mg/Li by Rhizobium leguminosarum bv. viciae AS35. Antimicrobial activity test showed maximum inhibition zone 17 mm by Rhizobium leguminosarum bv. viciae AS36 against Proteus vulgaris.

Sinorhizobium medicae WSM419 Genes That Improve Symbiosis between Sinorhizobium meliloti Rm1021 and Medicago truncatula Jemalong A17 and in Other Symbiosis Systems.

Some soil bacteria, called rhizobia, can interact symbiotically with legumes, in which they form nodules on the plant roots, where they can reduce atmospheric dinitrogen to ammonia, a form of nitrogen that can be used by growing plants. Rhizobium-plant combinations can differ in how successful this symbiosis is: for example, Sinorhizobium meliloti Rm1021 forms a relatively ineffective symbiosis with Medicago truncatula Jemalong A17, but Sinorhizobium medicae WSM419 is able to support more vigorous plant growth. Using proteomic data from free-living and symbiotic S. medicae WSM419, we previously identified a subset of proteins that were not closely related to any S. meliloti Rm1021 proteins and speculated that adding one or more of these proteins to S. meliloti Rm1021 would increase its effectiveness on M. truncatula A17. Three genes, Smed_3503, Smed_5985, and Smed_6456, were cloned into S. meliloti Rm1021 downstream of the E. coli lacZ promoter. Strains with these genes increased nodulation and improved plant growth, individually and in combination with one another. Smed_3503, renamed iseA (increased symbiotic effectiveness), had the largest impact, increasing M. truncatula biomass by 61%. iseA homologs were present in all currently sequenced S. medicae strains but were infrequent in other Sinorhizobium isolates. Rhizobium leguminosarum bv. viciae 3841 containing iseA led to more nodules on pea and lentil. Split-root experiments with M. truncatula A17 indicated that S. meliloti Rm1021 carrying the S. medicae iseA is less sensitive to plant-induced resistance to rhizobial infection, suggesting an interaction with the plant's regulation of nodule formation. IMPORTANCE Legume symbiosis with rhizobia is highly specific. Rhizobia that can nodulate and fix nitrogen on one legume species are often unable to associate with a different species. The interaction can be more subtle. Symbiotically enhanced growth of the host plant can differ substantially when nodules are formed by different rhizobial isolates of a species, much like disease severity can differ when conspecific isolates of pathogenic bacteria infect different cultivars. Much is known about bacterial genes essential for a productive symbiosis, but less is understood about genes that marginally improve performance. We used a proteomic strategy to identify Sinorhizobium genes that contribute to plant growth differences that are seen when two different strains nodulate M. truncatula A17. These genes could also alter the symbiosis between R. leguminosarum bv. viciae 3841 and pea or lentil, suggesting that this approach identifies new genes that may more generally contribute to symbiotic productivity.