Responses Of Fungal Communities Research Articles

Salt altered rhizosphere fungal community and induced soybean recruit specific species to ameliorate salt stress.

Different crop genotypes showed different adaptability to salt stress, which is partly attributable to the microorganisms in the rhizosphere. Yet, knowledge about how fungal communities of different genotypes in soybean respond to salt stress is limited. Here, qPCR and ITS sequencing were used to assess the response of rhizobial fungal communities of resistant and susceptible soybean to salt stress. Moreover, we isolated two fungal species recruited by resistant soybeans for validation. The assembly of fungal community structure might be strongly linked to alterations in fungal abundance and soil physicochemical properties. Salt stress derived structural differences in fungal communities of resistant and susceptible genotypes. The salt-resistant genotype appeared to recruit some fungal taxa to the rhizosphere to help mitigating salt stress. An increase of fungal taxa with predicted saprotrophic lifestyles might help promoting plant growth by increasing nutrient availability to the plants. Compared with the susceptible genotypes, the resistant genotypes had more stronger network structure of fungi. Lastly, we verified that recruited fungi, such as Penicillium and Aspergillus, can soybean adapt to salt stress. This study provided a promising approach for rhizospheric fungal community to enhance salt tolerance of soybean from the perspective of microbiology and ecology.

Contrasting sensitivity of soil bacterial and fungal community composition to one year of water limitation in Scots pine mesocosms.

The soil microbiome is crucial for regulating biogeochemical processes and can thus strongly influence tree health, especially under stress conditions. However, little is known about the effect of prolonged water deficit on soil microbial communities during the development of saplings. We assessed the response of prokaryotic and fungal communities to different levels of experimental water limitation in mesocosms with Scots pine saplings. We combined analyses of physicochemical soil properties and tree growth with DNA metabarcoding of soil microbial communities throughout four seasons. Seasonal changes in soil temperature and soil water content and a decreasing soil pH strongly influenced the composition of microbial communities but not their total abundance. Contrasting levels of soil water contents gradually altered the soil microbial community structure over the four seasons. Results indicated that prokaryotic communities were less resistant to water limitation than fungal communities. Water limitation promoted the proliferation of desiccation-tolerant, oligotrophic taxa. Moreover, water limitation and an associated increase in soil C/N ratio induced a shift in the potential lifestyle of taxa from symbiotic to saprotrophic. Overall, water limitation appeared to alter soil microbial communities involved in nutrient cycling, pointing to potential consequences for forest health affected by prolonged episodes of drought.

Long-term functional recovery and associated microbial community structure after sediment drying and bedform migration

Climate change and erosion from agricultural areas cause increased drying periods and bedform migration of riverbeds, respectively, worldwide. Both sediment drying and bedform migration can independently stress the microbial community residing in the riverbed. Here, we investigated the microbial response after exposure to these stressors with a focus on long-term recovery. We conducted an in situ experiment to investigate the long-term (8 months) functional and structural recovery of benthic microbial communities from either sediment drying (episodic severe stressor) or bedform migration (frequent moderate stressor). Stressed sediment associated communities were rewetted (dried sediments) and immobilized (migrated sediments) and exposed in the River Spree (north-eastern Germany) to initiate the recovery process. We then evaluated the microbial function (community respiration, net community production and extracellular enzymatic activities) as well as the bacterial, fungal and diatom community structure (16S rRNA gene and ITS region metabarcoding, and microscopic diatom morphotype classification). We observed different recovery times for community respiration (less than 7 days) and gross primary production (more than 5 months), implying a shift toward net heterotrophy in the first few months after stress exposure. Similarly, we observed a strong autotrophic community response (particularly associated with the diatoms Navicula and Fragilaria), especially in migrated sediments. The bacterial and fungal community response to sediment drying was stronger than to bedform migration (particularly associated with the bacterium Flavobacterium and the fungi Alternaria sp. and Aureobasidium pullulans). Our results show that sediment drying and bedform migration had a significant impact on the microbial community function and structure, which persisted for several months after the stress. Due to the surprising long period of recovery, successive stress events combined with seasonal effects will likely hamper the ongoing recovery process with severe alterations to the microbial function and structure. These findings extend the concept of ecosystem resilience and stability on the dimensions of timescale and seasonal environmental variations. Legacy effects are expected to play a key role when facing future stress.

A Natural Moisture Gradient Affects Soil Fungal Communities on the South Shore of Hulun Lake, Inner Mongolia, China.

Soil moisture content (SWC) can change the diversity and composition of soil fungal communities by affecting soil texture and soil nutrients. To explore the response of soil fungal communities to moisture in the grassland ecosystem on the south shore of Hulun Lake, we set up a natural moisture gradient that was subdivided into high (HW), medium (MW), and low (LW) water contents. Vegetation was investigated by quadrat method, and aboveground biomass was collected by the mowing method. Soil physicochemical properties were obtained by internal experiments. The composition of the soil fungal community was determined using high-throughput sequencing technology. The results showed significant differences in soil texture, nutrients, and fungal species diversity under the moisture gradients. Although there was significant clustering of fungal communities in different treatments, the fungal community composition was not significantly different. According to the phylogenetic tree, the Ascomycota and Basidiomycota were the most important branches. The fungal species diversity was smaller when SWC was higher, and in this environment (HW), the fungal-dominant species were significantly related to SWC and soil nutrients. At this time, soil clay formed a protective barrier for the survival of the dominant classes Sordariomycetes and Dothideomycetes and increased their relative abundance. In summary, the fungal community responded significantly to SWC on the southern shore of the Hulun Lake ecosystem in Inner Mongolia, China, and the fungal community composition of the HW group was stable and easier to survive.

Grazing intensity alters soil microbial diversity and network complexity in alpine meadow on the Qinghai-Tibet Plateau

Livestock grazing can alter biodiversity and ecosystem functions. However, how long-term and continuous grazing intensity affect belowground biodiversity remains unclear, especially for soil microbial diversity. Here, through a well-controlled 5-year field experiment in a Tibetan alpine meadow, the responses of soil bacterial and fungal communities to yak grazing intensity were examined. Our results showed that grazing intensity significantly changed soil bacterial and fungal community compositions, rather than microbial α-diversity. The co-occurrence network analysis indicated that both soil bacterial and fungal network complexity gradually decreased with increasing grazing intensities. Meanwhile, soil C/N ratio, soil moisture, dissolved organic nitrogen (DON), NH4+-N, and aboveground biomass (AGB) were related to soil bacterial community, and AGB, NO3--N, NH4+-N, and DON and were associated with soil fungal community. Taken together, our manipulative experiment provides empirical evidence that grazing intensity-induced alterations of aboveground vegetation and nitrogen availability primarily trigger the shift of soil microbial community and structure. These results can support grassland management and ecological restoration in alpine ecosystems.

Response of soil nutrients, enzyme activities, and fungal communities to biochar availability in the rhizosphere of mountainous apple trees

Response of soil nutrients, enzyme activities, and fungal communities to biochar availability in the rhizosphere of mountainous apple trees

Niche modelling predicts that soil fungi occupy a precarious climate in boreal forests

AbstractAimEfforts to predict the responses of soil fungal communities to climate change are hindered by limited information on how fungal niches are distributed across environmental hyperspace. We predict the climate sensitivity of North American soil fungal assemblage composition by modelling the ecological niches of several thousand fungal species.LocationOne hundred and thirteen sites in the United States and Canada spanning all biomes except tropical rain forest.Major Taxa StudiedFungi.Time Period2011–2018.MethodsWe combine internal transcribed spacer (ITS) sequences from two continental‐scale sampling networks in North America and cluster them into operational taxonomic units (OTUs) at 97% similarity. Using climate and soil data, we fit ecological niche models (ENMs) based on logistic ridge regression for all OTUs present in at least 10 sites (n = 8597). To describe the compositional turnover of soil fungal assemblages over climatic gradients, we introduce a novel niche‐based metric of climate sensitivity, the Sørensen climate sensitivity index. Finally, we map climate sensitivity across North America.ResultsENMs have a mean out‐of‐sample predictive accuracy of 73.8%, with temperature variables being strong predictors of fungal distributions. Soil fungal climate niches clump together across environmental space, which suggests common physiological limits and predicts abrupt changes in composition with respect to changes in climate. Soil fungi in North American climates are more likely to be limited by cold and dry conditions than by warm and wet conditions, and ectomycorrhizal fungi generally tolerate colder temperatures than saprotrophic fungi. Sørensen climate sensitivity exhibits a multimodal distribution across environmental space, with a peak in climates corresponding to boreal forests.Main ConclusionsThe boreal forest occupies an especially precarious region of environmental space for the composition of soil fungal assemblages in North America, as even small degrees of warming could trigger large compositional changes characterized mainly by an influx of warm‐adapted species.

Response of Soil Microbial Diversity to Long-term Enclosure in Degraded Patches of Alpine Meadow in the Source Zone of the Yellow River

The soil pH, water content, nutrients, and microbial community composition and diversity among one-year term (E1), short-term (E4), and long-term (E10) enclosures were analyzed for understanding the response of soil bacterial and fungal communities to long-term enclosure in degraded patches of alpine meadow in the source zone of the Yellow River, through determining the soil physicochemical properties and microbial diversity using high-throughput sequencing technology. The results showed that the E1 enclosure significantly decreased soil pH, whereas long-term and short-term enclosures increased soil pH. The long-term enclosure could significantly increase soil water content and total nitrogen content, and the short-term enclosure could significantly increase available phosphorus content. The long-term enclosure could significantly increase the bacterial Proteobacteria. The short-term enclosure could significantly increase the abundance of the bacteria Acidobacteriota. However, the abundance of the fungus Basidiomycota decreased in both long-term and short-term enclosures. With the extension of enclosure years, the Chao1 index and Shannon diversity index of bacteria showed an increasing trend, but there was no significant difference between long-term and short-term enclosures. The Chao1 index of fungi gradually increased, and the Shannon diversity index first increased and then decreased, but there was no significant difference between long-term and short-term enclosures. Redundancy analysis indicated that enclosure altered microbial community composition and structure mainly by changing soil pH and water content. Therefore, the E4 short-term enclosure could significantly improve the soil physicochemical properties and microbial diversity at the degraded patches of alpine meadow. The long-term enclosure is not necessary and will lead to the waste of grassland resources, reduction in biodiversity, and restriction of wildlife activities.

Response of soil fungal community to chromium contamination in agricultural soils with different physicochemical properties

Chromium (Cr) contamination has been of great concern in agricultural soil health due to its persistence, toxicity and bioaccumulation. Fungi, as an essential regulator of soil remediation and biochemical processes, had an unclear response to Cr contamination. In this study, the composition, diversity and interaction mechanisms of fungal communities in agricultural soils from ten different provinces of China were investigated in order to elucidate the fungal community response to varying soil properties and Cr concentrations. The results showed that high concentrations of Cr led to substantial alterations in the fungal community composition. The complex soil properties had a far greater impact on the fungal community structure than the single factor of Cr concentration, with soil available phosphorus (AP) and pH being most influential. Function predictions based on FUNGuild indicated that high concentrations of Cr have a significant impact on certain functional groups of fungi, including mycorrhizal fungi and plant saprotroph. The fungal community tended to resist Cr stress by enhancing interactions and clustering among network modules, while generating new keystone taxa. This study allowed insights into the response of soil fungal community to Cr contamination in different agricultural soils from different provinces and provided a theoretical basis for soil Cr ecological risk assessment and the development of bioremediation techniques for Cr-contaminated soils.

Host identity affects the response of mycorrhizal fungal communities to high severity fires in Alaskan boreal forests

Host identity affects the response of mycorrhizal fungal communities to high severity fires in Alaskan boreal forests

Disturbance induces similar shifts in arbuscular mycorrhizal fungal communities from grassland and arable field soils.

Anthropogenic disturbances play an increasingly important role in structuring the diversity and functioning of soil organisms such as arbuscular mycorrhizal (AM) fungi. Frequently, multiple land-use practices, which may represent disturbances for AM fungal communities, operate simultaneously in different habitats. It is not known, however, how previous land-use history and specific habitat type influence AM fungal community response to disturbances. We applied mechanical (cutting to stimulate tillage) and chemical (herbicide addition) disturbances to AM fungal communities from meadow and arable field soils. Our results indicated that AM fungal communities from meadows, which previously had experienced mowing, were more species rich than communities from fields that had experienced intensive land-use practices. There were no significant differences, however, in the responses to disturbance of the AM fungal communities from field and meadow soils. We expected mechanical disturbance to promote taxa from the family Glomeraceae which are expected to exhibit a ruderal life-history strategy; instead, the abundance of this family increased in response to chemical disturbance. Simultaneous application of mechanical disturbance and herbicide decreased only the abundance of Diversisporaceae. No AM fungal families increased in abundance when both mechanical and chemical disturbances were applied simultaneously, but all disturbances increased the abundance of culturable AM fungi. Our study demonstrates that although chemical and mechanical forms of disturbance favor different AM fungal families, existing information about family-level characteristics may not adequately characterize the life history strategies of AM fungus species.

Distinct response of total and active fungal communities and functions to seasonal changes in a semi‐enclosed bay with mariculture (Dongshan Bay, Southern China)

AbstractIncreasing evidence suggests that fungal communities are key components of biogeochemical cycles in coastal ecosystems. However, at a regional scale, the major drivers of the seasonal and spatial distribution of fungi in areas impacted by mariculture remain largely unknown. Intensive aquaculture takes place in Dongshan Bay of Fujian, China, a typical subtropical marine ecosystem with multiple environmental gradients extensively perturbed by anthropogenic activities. To better understand the consequences of mariculture on fungal community composition and activities, we simultaneously evaluated the temporal (four different seasons) and spatial dynamics in total (DNA) and active (RNA) fungal communities of Dongshan Bay in relation to several major physicochemical properties. Our results revealed that fungal communities in the Bay were highly diverse, but showed the ubiquitous dominance of Dikarya and the occasional predominance of Glomeromycota, Mucoromycota, Mortierellomycota, Chytridiomycota, Olpidiomycota, and Rozellomycota. Fungal diversity varied much more with season than with the degree of aquaculture activity, for both total and active communities. This notion is supported by co‐occurrence networks exhibiting a clear seasonal pattern. Furthermore, fungal community structure in coastal waters showed distinct relationships with environmental factors varying both with season and in space. For both total and active fungal communities, a combination of environmental variables including temperature, dissolved oxygen, and nitrite exhibited the greatest impact on community structure. Our study demonstrates a distinct spatiotemporal dynamics of both total and active fungi and provides a foundation to better understand the ecological roles of marine fungi in coastal ecosystems in relation to mariculture activities.

Labile carbon inputs support the recovery of bacterial communities, but not fungal communities, from a simulated bovine urine event

Inputs of carbon to soil may be used to stimulate microbial growth and immobilize excess nitrogen from sources such as livestock urine. However, the growth responses of microbial taxa to carbon inputs under conditions of excess soil nitrogen remain poorly understood. Using DNA metabarcoding and a field-based soil lysimeter experiment, we characterised the temporal responses (up to 112 days) of bacterial and fungal communities to a simulated bovine urine event plus inputs of labile carbon (sucrose) at two concentrations. Fungal communities were impacted more strongly than bacterial communities by carbon inputs following the simulated urine event, with more variable responses among taxa. Chytridiomycota and Glomeromycota richness were most negatively affected, and Tremellomycetes richness most positively affected, by carbon inputs. A minority of fungal ASVs had greatly increased proportional abundances in response to carbon, while fungal trophic composition became highly dominated by saprotrophs by the experiment end. Bacterial taxa showed consistent trends of declining (to about 14 days) and recovering (to 112 days) richness in response to urine and carbon inputs, but carbon-related evenness and proportional abundance trends varied between taxa. Proportional abundances of Actinobacteria, Bacteroidetes, Betaproteobacteria, and Gammaproteobacteria increased in response to carbon, whereas proportional abundances of Acidobacteria, candidate division WPS-1, Planctomycetes, Deltaproteobacteria, and Verrucomicrobia decreased. These results show that labile carbon inputs to limit nitrate leaching support the recovery of bacterial communities to bovine urine events but may have long-term impacts on fungal community composition and function, with potential consequences for soil food webs, carbon sequestration, and agricultural productivity.

Context-dependence of fungal community responses to dominant tree mycorrhizal types in Northern hardwood forests

Dominant tree community mycorrhizal associations can influence soil biogeochemistry and nutrient cycling, suggesting a prominent role of mycorrhizas in shaping belowground microbial community composition and function. The degree to which the mycorrhizal type of dominant trees interacts with natural environmental gradients to influence belowground microbial communities is, however, unclear. Likewise, it is unknown if community-level mycorrhizal associations can influence the local microbial community encountered by an individual tree through spillover effects. To address these questions, we studied fungal communities from soil, roots, and leaf litter surrounding individual arbuscular (AM) and ectomycorrhizal (ECM) trees embedded in gradients of tree mycorrhizal dominance from three climatically distinct locations in the Adirondack Mountains, NY, USA. We found that dominant tree mycorrhizal types interact with site location to explain more variation in fungal community composition, richness, and function than specific soil properties, such as pH. This finding was consistent for all three sample types, but soil-associated fungi demonstrated the largest amount of explainable variation compared to root- and leaf litter-associated fungi. The relative abundance of plant pathogens was especially responsive to tree mycorrhizal dominance, increasing with AM dominance around individual AM trees but not around ECM trees in the same forests. These “mycorrhizal-spillover” effects on AM trees were also strongest in our warmest, driest site and weakest in our coolest, wettest site, indicating that the strength of mycorrhizal spillover is context-dependent in mixed-mycorrhizal forests.

DOP52 The faecal bacterial and fungal microbiome of newly-diagnosed, treatment naïve children with Crohn’s disease and the modifying effects of exclusive enteral nutrition and re-introduction of habitual diet

Abstract Background The fungal community (mycobiome) and immunological responses to specific fungi have been implicated in Crohn’s disease (CD) pathogenesis and its phenotype. There is limited data on profiling the mycobiome in paediatric CD and how it changes during treatment Methods Fungal (ITS2) and bacterial (16S rRNA) microbiome analysis in faecal samples (n=124) from n=34 CD children before, during (30 and 60 days) and after exclusive enteral nutrition (EEN) at food reintroduction (within 60 days of EEN completion), and from 31 healthy controls were profiled. IgA and IgG anti-Saccharomyces cerevisiae antibodies (ASCA) analysis by enzyme-linked immunosorbent assay, in blood, was also carried out for CD patients prior to EEN initiation. Results The global mycobiome composition (β diversity) was different between CD and healthy children (R2=0.050; p=0.007) and presented lower Chao1 richness (mean 24.3 vs 33.0; p=0.005) for the CD cases; 13 fungal operational taxonomic units (OTUs) differed between the two groups. Similar signals were observed for the bacterial microbiome but the difference in global community structure (β diversity) was more profound than the fungal community (R2=0.094; p<0.001). Treatment with EEN induced drastic changes in mycobiome composition (β diversity), which were more profound and more variable than the effects observed for the bacterial community. Of the OTUs with abundance significantly lower in CD than healthy controls prior to EEN, one, belonging to S. cerevisiae, significantly decreased during EEN (compared with baseline; p<0.001 and p=0.086 at 30 and 60 days on EEN). Patients whose faecal calprotectin was low (<250 mg/kg) during food reintroduction had a lower mycobiome richness than those whose FC was raised (>250 mg/kg). 29 fungal OTUs were significantly different between these two groups in samples taken during food reintroduction, following EEN. Patients who were ASCA positive had a higher abundance of three OTUs of S. cerevisiae. In co-occurrence network analysis, Simplicillium chinense, presented significant more interactions with members of the bacterial community, particularly OTUs which changed during EEN. After participants had returned to their regular diets these microbial effects reversed and community structure moved towards that observed prior to EEN. Conclusion The mycobiome of children with CD present features of dysbiosis similar to the bacterial microbiome and improvement in disease condition during EEN is strongly associated with changes in its composition.

Response of the Soil Fungal Community and Its Function during the Conversion of Forestland to Tea Plantations: A Case Study in Southeast China

Land-use change is one of the most important driving factors of change in soil microbial diversity. Deforestation for tea plantations has transformed large areas of forestland in hilly areas of Southeast China. However, its impact on the soil fungal community structures and functions is still understudied. We compared the soil fungal communities and their functions in forestland (FD), a 3-year-old tea plantation (ZC3) and a 30-year-old tea plantation (ZC30) at 0–20 cm and 20–40 cm soil depths. The soil fungal community compositions and potential functions were analyzed using high-throughput sequencing techniques coupled with FUNGuild analysis. The results showed that the initial conversion from forestland to tea plantations significantly decreased soil fungal diversity. With an increase in the tea plantation age, the soil fungal diversity rebounded. The dominant phyla included Ascomycota, Basidiomycota, unclassified_k_fungi and Mortierellomycota, which were identified in all soil samples and accounted for 90% of all fungal communities. Non-metric multidimensional scaling analysis (NMDS) indicated that the soil fungal community was more responsive to the duration of tea planting than to the soil depth. FUNGuild analysis showed that the relative abundance of pathogenic and pathotrophic-saprotrophic fungi was higher while saprotrophs were lower in ZC30 compared with FD. Among the analyzed soil properties, soil available nitrogen, available phosphorus, available potassium and bulk density were the prime factors affecting the abundance and diversity of soil fungal community compositions. Network analysis showed that fungal microbial taxa increased positive interactions to enhance the adaptability of fungal microorganisms to long-term tea planting. Collectively, our results provide a clear view on the dynamic yet differential responses of fungal communities to land-use changes, and further emphasizes the need for long-term conventional tea plantations to adopt sustainable agricultural practices to reduce soil pathogenic fungi.

Sex-specific competition differently regulates the response of the rhizosphere fungal community of Hippophae rhamnoides-A dioecious plant, under Mn stress.

In this study, we investigated the soil physicochemical parameters and responses of rhizospheric fungal communities of Hippophae rhamnoides to Mn stress under different sexual competition patterns. The results showed that competition significantly affects soil physicochemical properties, enzyme activity, and rhizosphere-associated fungal community structures. Under Mn stress, soils with intersexual competition had higher levels of N supply than those with the intrasexual competition. Moreover, fungal communities under intersexual interaction were more positive to Mn stress than intrasexual interaction. Under intrasexual competition, female plants had higher total phosphorus content, neutral phosphatase activity, and relative abundance of symbiotic fungi in soils to obtain phosphorus nutrients to alleviate Mn stress. In contrast, male plants had relatively stable fungal communities in soils. In the intersexual competition, rhizosphere fungal diversity and relative abundance of saprophytic fungi in male plants were significantly higher than in female plants under Mn stress. In addition, female plants showed greater plasticity in the response of rhizosphere microorganisms to their neighbors of different sexes. The microbial composition in soils of female plants varied more than male plants between intrasexual and intersexual competition. These results indicated that sex-specific competition and neighbor effects regulate the microbial community structure and function of dioecious plants under heavy metal stress, which might affect nutrient cycling and phytoremediation potential in heavy metal-contaminated soils.

Fungi and cercozoa regulate methane-associated prokaryotes in wetland methane emissions.

Wetlands are natural sources of methane (CH4) emissions, providing the largest contribution to the atmospheric CH4 pool. Changes in the ecohydrological environment of coastal salt marshes, especially the surface inundation level, cause instability in the CH4 emission levels of coastal ecosystems. Although soil methane-associated microorganisms play key roles in both CH4 generation and metabolism, how other microorganisms regulate methane emission and their responses to inundation has not been investigated. Here, we studied the responses of prokaryotic, fungal and cercozoan communities following 5 years of inundation treatments in a wetland experimental site, and molecular ecological networks analysis (MENs) was constructed to characterize the interdomain relationship. The result showed that the degree of inundation significantly altered the CH4 emissions, and the abundance of the pmoA gene for methanotrophs shifted more significantly than the mcrA gene for methanogens, and they both showed significant positive correlations to methane flux. Additionally, we found inundation significantly altered the diversity of the prokaryotic and fungal communities, as well as the composition of key species in interactions within prokaryotic, fungal, and cercozoan communities. Mantel tests indicated that the structure of the three communities showed significant correlations to methane emissions (p < 0.05), suggesting that all three microbial communities directly or indirectly contributed to the methane emissions of this ecosystem. Correspondingly, the interdomain networks among microbial communities revealed that methane-associated prokaryotic and cercozoan OTUs were all keystone taxa. Methane-associated OTUs were more likely to interact in pairs and correlated negatively with the fungal and cercozoan communities. In addition, the modules significantly positively correlated with methane flux were affected by environmental stress (i.e., pH) and soil nutrients (i.e., total nitrogen, total phosphorus and organic matter), suggesting that these factors tend to positively regulate methane flux by regulating microbial relationships under inundation. Our findings demonstrated that the inundation altered microbial communities in coastal wetlands, and the fungal and cercozoan communities played vital roles in regulating methane emission through microbial interactions with the methane-associated community.

Response of fungal communities to afforestation and its indication for forest restoration

Soil fungi in forest ecosystems have great potential to enhance host plant growth and systemic ecological functions and services. Reforestation at Saihanba Mechanized Forest Farm, the world's largest artificial plantation, has been integral to global forest ecosystem preservation since the 1950s. To better assess the ecological effects of soil microbiology after afforestation, fungal diversity and community structure (using Illumina sequencing) from forests dominated by Larix gmelinii var. principis-rupprechtii, Pinus sylvestris var. mongolica and Picea asperata, and from grassland were surveyed. In total, 4,540 operational taxonomic units (OTUs) were identified, with Mortierella and Solicoccozyma being the dominant genera of grassland soil and Inocybe, Cortinarius, Piloderma, Tomentella, Sebacina, Hygrophorus and Saitozyma dominating the plantation soil. Principle coordinate analysis (PCoA) and co-occurrence networks revealed differences in fungal structure after afforestation. Significantly, more symbiotroph guilds were dominated by ectomycorrhizal fungi in plantations under the prediction of FUNGuild. The community composition and diversity of soil fungi were significantly influenced by pH via redundancy analysis (RDA) and the Mantel test (p ​< ​0.01). This finding emphasizes that soil pH has a strong effect on the transition of fungal communities and functional taxa from grassland to plantation, providing a novel indicator for forest restoration.

Effects of nitrogen addition and seasonal change on arbuscular mycorrhizal fungi community diversity in a poplar plantation

Arbuscular mycorrhizal (AM) fungi play a crucial role in carbon (C), nitrogen (N), and phosphorous (P) biogeochemical cycling. Therefore, it is essential to determine the seasonal responses of the AM fungal community to N addition to understanding better the ecological processes against a background of intensified N deposition. Based on an ongoing field simulation experiment with five N addition levels (0, 5, 10, 15, and 30 gN·m−2·a−1) in a 5-year-old poplar plantation at Dongtai Forest Farm in Yancheng, Jiangsu province, eastern China, soil physicochemical properties, the root colonization rate, and the rhizosphere soil AM fungal community diversity and composition in four seasons (summer, autumn, winter, and spring) were investigated. Meanwhile, the relationships between the characteristics of the AM fungal community and soil environmental factors were analyzed. High-throughput sequencing showed that the dominant genera in the poplar plantation were Glomus (average relative abundance 87.52%), Diversispora (9.62%), and Acaulospora (1.85%). The addition of N significantly increased the root colonization rate in spring. The diversity of the AM fungal community (Chao and Shannon indexes) was primarily affected by seasonal change rather than N addition, and the diversity in summer was significantly lower than in the other three seasons. Redundancy analysis showed that soil temperature, available P, total P, and pH significantly affected the structure of the AM fungal community. It can be concluded N addition primarily influenced the root colonization rate, whereas seasonal change had a notable effect on the AM fungal community diversity. Although seasonal change and N addition greatly influenced the composition, seasonal change exerted a more substantial effect than N addition. These results will improve our understanding of the underground ecological processes in poplar plantation ecosystems.