Resistant Crops Research Articles

Identification and Functional Studies on the Role of PlSPL14 in Herbaceous Peony Stem Development.

Stem strength plays a crucial role in the growth and development of plants, as well as in their flowering and fruiting. It not only impacts the lodging resistance of crops, but also influences the ornamental value of ornamental plants. Stem development is closely linked to stem strength; however, the roles of the SPL transcription factors in the stem development of herbaceous peony (Paeonia lactiflora Pall.) are not yet fully elucidated. In this study, we obtained and cloned the full-length sequence of PlSPL14, encoding 1085 amino acids. Quantitative real-time PCR (qRT-PCR) analysis revealed that the expression level of PlSPL14 gradually increased with the stem development of P. lactiflora and was significantly expressed in vascular bundles. Subsequently, utilizing the techniques of virus-induced gene silencing (VIGS) and heterologous overexpression in tobacco (Nicotiana tabacum L.), it was determined that PlSPL14-silenced P. lactiflora had a thinner xylem thickness, a decreased stem diameter, and weakened stem strength, while PlSPL14-overexpressing tobacco resulted in a thicker xylem thickness, an increased stem diameter, and enhanced stem strength. Further screening of the interacting proteins of PlSPL14 using a yeast two-hybrid (Y2H) assay revealed an interactive relationship between PlSPL14 and PlSLR1 protein, which acts as a negative regulator of gibberellin (GA). Additionally, the expression level of PlSLR1 gradually decreased during the stem development of P. lactiflora. The above results suggest that PlSPL14 may play a positive regulatory role in stem development and act in the xylem, making it a potential candidate gene for enhancing stem straightness in plants.

Prediction of resistance, virulence, and host-by-pathogen interactions using dual-genome prediction models

Key messageIntegrating disease screening data and genomic data for host and pathogen populations into prediction models provides breeders and pathologists with a unified framework to develop disease resistance.Developing disease resistance in crops typically consists of exposing breeding populations to a virulent strain of the pathogen that is causing disease. While including a diverse set of pathogens in the experiments would be desirable for developing broad and durable disease resistance, it is logistically complex and uncommon, and limits our capacity to implement dual (host-by-pathogen)-genome prediction models. Data from an alternative disease screening system that challenges a diverse sweet corn population with a diverse set of pathogen isolates are provided to demonstrate the changes in genetic parameter estimates that result from using genomic data to provide connectivity across sparsely tested experimental treatments. An inflation in genetic variance estimates was observed when among isolate relatedness estimates were included in prediction models, which was moderated when host-by-pathogen interaction effects were incorporated into models. The complete model that included genomic similarity matrices for host, pathogen, and interaction effects indicated that the proportion of phenotypic variation in lesion size that is attributable to host, pathogen, and interaction effects was similar. Estimates of the stability of lesion size predictions for host varieties inoculated with different isolates and the stability of isolates used to inoculate different hosts were also similar. In this pathosystem, genetic parameter estimates indicate that host, pathogen, and host-by-pathogen interaction predictions may be used to identify crop varieties that are resistant to specific virulence mechanisms and to guide the deployment of these sources of resistance into pathogen populations where they will be more effective.

Molecular Breeding for Biotic and Abiotic Stress Resistance in Vegetable Crops

Molecular Breeding for Biotic and Abiotic Stress Resistance in Vegetable Crops

Selenium–nitrogen-co-doped carbon dots increase rice seedling growth and salt resistance

Soil salinity seriously affects the utilization of farmland and threatens the crop production. Here, a selenium-nitrogen-co-doped carbon dots was developed, which increased rice seedling growth and alleviated its inhibition by salt stress by foliar spraying. The treatment activated Ca2+ and jasmonic acid signaling pathways and increased iron homeostasis, antioxidant defense, and cell wall development of rice seedlings. It could be used to increase crop resistance to environmental stress.

Combined transcriptomics and metabolomics analysis reveals salinity stress specific signaling and tolerance responses in the seagrass Zostera japonica.

Multiple regulatory pathways of Zostera japonica to salt stress were identified through growth, physiological, transcriptomic and metabolomic analyses. Seagrasses are marine higher submerged plants that evolved from terrestrial monocotyledons and have fully adapted to the high saline seawater environment during the long evolutionary process. As one of the seagrasses growing in the intertidal zone, Zostera japonica not only has the ability to quickly adapt to short-term salt stress but can also survive at salinities ranging from the lower salinity of the Yellow River estuary to the higher salinity of the bay, making it a good natural model for studying the mechanism underlying the adaptation of plants to salt stress. In this work, we screened the growth, physiological, metabolomic, and transcriptomic changes of Z. japonica after a 5-day exposure to different salinities. We found that high salinity treatment impeded the growth of Z. japonica, hindered its photosynthesis, and elicited oxidative damage, while Z. japonica increased antioxidant enzyme activity. At the transcriptomic level, hypersaline stress greatly reduced the expression levels of photosynthesis-related genes while increasing the expression of genes associated with flavonoid biosynthesis. Meanwhile, the expression of candidate genes involved in ion transport and cell wall remodeling was dramatically changed under hypersaline stress. Moreover, transcription factors signaling pathways such as mitogen-activated protein kinase (MAPK) were also significantly influenced by salt stress. At the metabolomic level, Z. japonica displayed an accumulation of osmolytes and TCA mediators under hypersaline stress. In conclusion, our results revealed a complex regulatory mechanism in Z. japonica under salt stress, and the findings will provide important guidance for improving salt resistance in crops.

Polystyrene nanoplastics induce cell type-dependent secondary wall reinforcement in rice (Oryza sativa) roots and reduce root hydraulic conductivity

Nanoplastics (NPs) have been demonstrated the ability to penetrate plant roots and cause stress. However, the extent of NPs penetration into various root tissues and the corresponding plant defense mechanisms remain unclear. This study examined the penetration and accumulation patterns of polystyrene nanoplastics (PS-NPs) in different cell types within rice roots, and explored how the roots quickly modify their cell wall structure in response. The findings showed that fully developed sclerenchyma cells in rice roots effectively prevented the invasion of PS-NPs. Meanwhile, PS-NPs triggered the accumulation of lignin and suberin in specific cells such as the exodermis, sclerenchyma, and xylem vessels. PS-NPs at a concentration of 50 mg L−1 increased cell wall thickness by 18.6 %, 21.1 %, and 22.4 % in epidermis, exodermis, and sclerenchyma cells, respectively, and decreased root hydraulic conductivity by 14.8 %. qPCR analysis revealed that PS-NPs influenced the cell wall synthesis pathway, promoting the deposition of lignin and suberin monomers on the secondary wall through the up-regulation of genes such as OsLAC and OsABCG. These results demonstrate that PS-NPs can induce cell type-specific strengthening of secondary walls and barrier formation in rice roots, suggesting the potential role of plant secondary wall development in mitigating NPs contamination risks in crops.

Biomass-derived carbon dots enhanced maize (Zea mays L.) drought tolerance by regulating phyllosphere microorganisms and ion fluxes

Enhancing crop drought tolerance is beneficial for increasing crop yield and ensuring food security. This study demonstrates that foliar application of biomass-derived carbon dots (Soy-CDs, 10 mg·L−1) can enhance the drought tolerance of maize, leading to an increase in fresh weight of maize shoots and roots (50.5 % and 54.9 %) and dry weight of maize shoots and roots (40.0 % and 37.7 %), respectively. Meanwhile, Soy-CDs altered the abundance of phyllosphere microorganisms (e.g. Proteobacteria, Deinococcus-Thermus, Verrucomicrobia, and Actinobacteria) of maize under drought stress, which enhanced the nitrogen fixation and stress resistance in maize leaves. Besides, Soy-CDs also promote Ca2+ influx and Na+ efflux in maize mesophyll cells under drought stress, facilitating the regulation of ion osmotic balance and contributing to the improvement of maize drought tolerance. Furthermore, Soy-CDs enhanced photosynthesis (55.3 %) of maize under drought stress, and the full life cycle study showed that Soy-CDs can promote the metabolism of maize kernels, ultimately improve the yield (40.5 %) and nutritional quality of maize. Therefore, this work discovers the enormous potential of biomass-derived carbon dots in improving drought resistance and quality of crop, which contributes to ensure food security.

A natural glutathione S-transferase gene GSTU23 confers metabolic resistance to metamifop in Echinochloa crus-galli

Herbicides are essential for farmers to control weed. However, prolonged use of herbicides has caused the development of herbicide resistance in weeds. Here, the resistant Echinochloa crus-galli (RL5) was obtained by continuous treatment with metamifop for five generations in paddy fields. RL5 plants showed a 13.7-fold higher resistance to metamifop compared to susceptible E. crus-galli (SL5) plants. Pre-treatment with GST inhibitor (NBD-Cl) significantly increased the susceptibility of RL5 plants to metamifop. Faster metamifop metabolism and higher GST activity in RL5 plants than in SL5 plants were also confirmed, highlighting the role of GST in metabolic resistance. RNA-Seq analysis identified EcGSTU23 as a candidate gene, and this gene was up-regulated in RL5 and field-resistant E. crus-galli plants. Furthermore, the EcGSTU23 gene was overexpressed in the transgenic EcGSTU23-Maize, and the EcGSTU23-Maize showed resistance to metamifop. In vitro metabolic studies also revealed that the purified EcGSTU23 displayed catalytic activity in glutathione (GSH) conjugation, and metamifop was rapidly metabolized in the co-incubation system containing EcGSTU23 protein. These results provide direct experimental evidence of EcGSTU23's involvement in the metabolic resistance of E. crus-galli to metamifop. Understanding the resistance mechanism can help in devising effective strategies to combat herbicide resistance and breeding of genetically modified herbicide resistant crops.

Microbial preparations for controlling the number of pests (phytophages): mechanisms of action and benefits of use

The article demonstrates environmentally safe and effective ways to control insect pests with the help of biological products. The main representatives of biological products producers, their mechanisms of action on pests, as well as advantages and features of their application are described. The mechanism of action of preparations based on Bacillus thuringiensis is explained in detail and the issue of using this microorganism to create resistant GM crops is touched upon. The details of the mechanism of action of entomopathogenic fungi on insect pests and the scheme of infection, reproduction and their distribution are demonstrated. It is noted that entomopathogenic viruses are the most specific among all entomopathogenic microorganisms. They are characterized by extreme selectivity of pathogenic action, i.e. the ability to infect one or more arthropod species without harming others. This feature is a guarantee of safety for non-target organisms, but despite their success in pest control, their difficulty in mass production and easy degradation in the environment makes them less popular among farmers. The main producers of biological products, their mechanisms of action on pests, as well as their advantages and peculiarities in application are described. The importance of integrating different methods of pest control and combining different biological products to obtain maximum yields in environmentally friendly plant cultivation is shown

Divergent evolution of NLR genes in the genus Glycine: impacts of annuals and perennials' life history strategies.

Within the family Fabaceae, the genus Glycine is composed of two subgenera annuals (2n=40) and perennials. This life strategy transition may have differentially affected the evolution of various gene families. Its cultivated species G. max has high level of susceptibility to major pathogens including viruses, bacteria and fungi. Understanding nucleotide-binding domain leucine-rich repeat (NLR) genes evolution in soybean is of paramount importance due to their central role in plant immunity and their potential in improving disease resistance in soybean cultivars. In this study, we investigated the significance of this annual-perennial transition on the macroevolution of NLR genes in the genus Glycine. Our results reveal a remarkable distinction between annual species such as Glycine max and Glycine soja, which exhibit an expanded NLRome compared to perennial species (G. cyrtoloba, G. stenophita, G.dolichocarpa, G. falcata, G. syndetika, G. latifolia and G. tomentella). Our evolutionary timescale analysis pinpoints recent accelerated gene duplication events for this expansion, which occurred between 0.1 and 0.5 million years ago, driven predominantly by lineage-specific and terminal duplications. In contrast, perennials initially experienced significant contraction during the diploidisation phase following the Glycine-specific whole-genome duplication event (~10 million years ago). Despite the reduction in the NLRome, perennial lineages exhibit a unique and highly diversified repertoire of NLR genes with limited interspecies synteny. The investigation of gene gain and loss ratios revealed that this diversification resulted from the birth of novel genes following individual speciation events. Among perennials, G. latifolia, a well-known resistance resource, has the highest ratio of these novel genes in the tertiary gene pool. Our study suggests evolutionary mechanisms, including recombination and transposition, as potential drivers for the emergence of these novel genes. This study also provides evidence for the unbalanced expansion of the NLRome in the Dt subgenome compared with the At subgenome in the young allopolyploid G.dolichocarpa. To the best of our knowledge, this is the first study to investigate the effect of annuality and perenniality life transition on the evolution of NLR genes in the genus Glycine to identify its genomics resources for improving the resistance of soybean crop with global importance on the economy and food security.

Assessment of behavioural response to climate forecasts and climate change adaptation by small-holder farmers in Nambale sub-county of Busia county, Kenya

Under climate change and unpredictable rainfall variability, rainfed agriculture has often been characterised with high degree of crop failure, especially when rainfall seasons portray anomalies in rainfall onsets and cessation. This study sought to establish the level of utilisation of climate forecasts and behavioural response to such products by the smallholder farmers in Nambale, Busia, Kenya. A total of 30 subsistence farmers were interviewed. Results showed that about 4 in every 5 farmers are largely unconscious of climate change and its effects and did not adhere to the climatic forecasts, instead, farming was subjected to the year-to-year routine practices, dependent on the traditional approaches. About 60% of the farmers lacked knowledge of climate change and believed that crop failure is beyond human understanding. 100% of the farmers planted maize in the two main planting seasons of March-April-May (MAM) and August-September-October (ASO), with about 86.7% of them least practicing crop diversification or intercropping. Furthermore, climate change adaptation interventions such as planting of early maturing, drought resistant crops and crop irrigation were unlikely among the farmers. Crop performance on an experimental farm established by the Nambale Science Place-Centre for Community Engagement on Climate Risk Interpretation (NSP-CCECRI), showed potential for enhanced farm production if farming activities are adhered to timely utilisation of climate forecasts. Based on these findings, and considering limited climate change adaptation strategies, there is need for sensitising smallholder farmers in enhancing knowledge on climate change and adaptation for enhanced food security, building community climate change resilience and alleviating poverty levels.

Advancing crop disease resistance through genome editing: a promising approach for enhancing agricultural production.

Modern agriculture has encountered several challenges in achieving constant yield stability especially due to disease outbreaks and lack of long-term disease-resistant crop cultivars. In the past, disease outbreaks in economically important crops had a major impact on food security and the economy. On the other hand climate-driven emergence of new pathovars or changes in their host specificity further poses a serious threat to sustainable agriculture. At present, chemical-based control strategies are frequently used to control microbial pathogens and pests, but they have detrimental impact on the environment and also resulted in the development of resistant phyto-pathogens. As a replacement, cultivating engineered disease-resistant crops can help to minimize the negative impact of regular pesticides on agriculture and the environment. Although traditional breeding and genetic engineering have been instrumental in crop disease improvement but they have certain limitations such as labour intensity, time consumption, and low efficiency. In this regard, genome editing has emerged as one of the potential tools for improving disease resistance in crops by targeting multiple traits with more accuracy and efficiency. For instance, genome editing techniques, such as CRISPR/Cas9, CRISPR/Cas13, base editing, TALENs, ZFNs, and meganucleases, have proved successful in improving disease resistance in crops through targeted mutagenesis, gene knockouts, knockdowns, modifications, and activation of target genes. CRISPR/Cas9 is unique among these techniques because of its remarkable efficacy, low risk of off-target repercussions, and ease of use. Some primary targets for developing CRISPR-mediated disease-resistant crops are host-susceptibility genes (the S gene method), resistance genes (R genes) and pathogen genetic material that prevents their development, broad-spectrum disease resistance. The use of genome editing methods has the potential to notably ameliorate crop disease resistance and transform agricultural practices in the future. This review highlights the impact of phyto-pathogens on agricultural productivity. Next, we discussed the tools for improving disease resistance while focusing on genome editing. We provided an update on the accomplishments of genome editing, and its potential to improve crop disease resistance against bacterial, fungal and viral pathogens in different crop systems. Finally, we highlighted the future challenges of genome editing in different crop systems for enhancing disease resistance.

Plant-microbe Interactions and their Potential Application in Improving Disease Resistance in Vegetable Crops

Microorganisms have a substantial impact on the environment and have been observed to either immunize or infect organisms from all kingdoms. Plants and microorganisms have undergone co-evolution and engage in interactions within their natural environment. Plant microbiota, often known as plant-associated microorganisms, are essential components of plant existence. Similar to other living systems, the plant body interacts with a range of living and non-living factors as it develops in an intricate environment. The plant microbiome can sustain disease suppression by providing essential tasks to their host, such as stress tolerance, vitality, and development. Plants and microorganisms have evolved molecular systems to mutually interact and derive advantages from their interaction. This symbiotic relationship is advantageous for both the microorganisms and the plants. Various pathways have been explored and are currently being utilized to achieve agricultural, environmental, and health benefits, based on this molecular interaction. Plant-associated microorganisms serve a vital role in the growth and development of plants. Microorganisms stimulate plant growth by directly increasing nutrient uptake and stimulating hormone production. The potential benefits of these mutually beneficial interactions between plants and microbes could be connected to develop microbial inoculants for application in agricultural biotechnology. In general, the utilization of microorganisms and the establishment of beneficial plant-microbe interactions offer promising and environmentally favourable approaches for sustainable and organic agriculture worldwide.

Chitosan nanofertilizer to strengthen sink strength and provide resistance against PFSR (post flowering stalk rot) disease in maize

We herein report a significant increase in sink strength and disease resistance in maize crop using copper-salicylic acid co-encapsulated chitosan nanofertilizer in seed treatment and foliar application. These chitosan nanofertilizer (0.01–0.16%) exhibited significant antifungal activity against post-flowering stalk rot (PFSR) in pot house [45.2–73.5% (mycelia growth) and 40.0–79.6% (spore germination)]. In field conditions, chitosan nanofertilizer (0.01–0.16%) effectively controlled the PFSR disease with PEDC (percentage efficacy of disease control) values of 68.6–93.8%. The results are evident with the significant improvement in defence enzyme activities namely phenylalanine ammonia lyase (PAL, 4.9 fold increase) and polyphenol oxidase (PPO, 2.3 fold increase). Crop growth parameters namely plant height, ear height, cob weight, test weight, grain yield/plot and biomass were also significantly improved. The grain yield increased by 1.8 fold proving that up-regulated source activity is coupled with elevated sink strength. Overall, we claim that the developed chitosan nanofertilizer serves both as a fertilizer as well as a pesticide. The developed fertilizer has agricultural importance and could be tested for its potential use in other crops.

Transcriptomic Change in the Effects of Dichloroquinolinic Acid on the Development and Growth of Nicotiana tabacum

Dichloroquinolinic acid is a hormone-type herbicide widely used to control barnyard grass during crop cultivation. However, it can seriously inhibit the growth of susceptible crops, including tobacco, because it degrades slowly under field conditions. Additionally, the mechanism by which it damages crops is unclear. More specifically, the transcriptional changes in plants induced by dichloroquinolinic acid remain unknown. In this study, differentially expressed genes (DEGs) in tobacco treated with dichloroquinolinic acid (varying concentrations and durations) were analyzed and validated to explore the global transcriptome changes. The number of DEGs, which were determined according to the FPKM, varied from 758 to 21,340. The KEGG analysis revealed that many DEGs were involved in starch and sucrose metabolism, phenylpropanoid biosynthesis, photosynthesis, porphyrin and chlorophyll metabolism, and glutathione metabolism. Transcriptomic analyses indicated that dichloroquinolinic acid can inhibit tobacco growth by inhibiting photosynthesis and storage of energy. We discovered that the toxicity mechanism of the hormone herbicide dichloroquinolinic acid differs from that of high concentrations of IAA (Indoleacetic acid), despite studies confirming that the effects of hormone herbicides are consistent with the physiological disturbances and growth inhibition exhibited by plants in IAA overdose. Particularly, dichloroquinolinic acid suppresses photosynthesis while high concentration IAA stimulates nucleotide synthesis and photosynthesis. More importantly, we found by editing the IAA-responsive gene IAA16, tobacco could develop resistance to dichloroquinolinic acid. The results will help clarify plant responses to hormone-type herbicides at the transcriptional level, thereby providing insights into the diversity in the gene’s response to herbicides, the molecular targets of hormone-type herbicides, and the mechanism underlying the susceptibility of tobacco to dichloroquinolinic acid. Accordingly, this study may be helpful for future research to enhance crop resistance to herbicides residues.

Green manure application improves insect resistance of subsequent crops through the optimization of soil nutrients and rhizosphere microbiota

Green manure (GM) enhances organic agriculture by improving soil quality and microbiota, yet its effects on plant resistance are unclear. Investigating the GM crop hairy vetch-maize rotation system, a widely adopted GM practice in China, we aimed to determine maize resistance to fall armyworm (FAW), Spodoptera frugiperda (Smith), a major pest. Greenhouse experiments with three fertilization treatments (chemical fertilizer, GM, and a combination) revealed that GM applications significantly improved maize resistance to FAW, evidenced by reduced larval feeding preference and pupal weight. GM also enriched soil nutrients, beneficial rhizobacteria, and resistance-related compounds, such as salicylic acid, jasmonic acid, and 2,4-dihydroxy-7-methoxy-1,4-benzoxazin-3-one (DIMBOA), in maize. The results suggest that GM-amended soils and microbial communities may have an underestimated role in regulating host plant adaptation to pests by increasing plant resistance. This study can provide information for developing and implementing environmentally friendly and sustainable cropping systems with enhanced resistance to pests and diseases.

Heterologous synthesis of poly-γ-glutamic acid enhanced drought resistance in maize (Zea mays L.)

Drought stress is the main factor restricting maize yield. Poly-γ-glutamic acid (γ-PGA), as a water-retaining agent and fertilizer synergist, could significantly improve the drought resistance and yield of many crops. However, its high production costs and unclear long-term impact on soil ecology limit its large-scale application. In this study, an environmentally friendly green material γ-PGA was heterologous synthesized in maize for the first time using the synthetic biology method. The genes (PgsA, PgsB, PgsC) participated in γ-PGA synthesis were cloned from Bacillus licheniformis and transformed into maize to produce γ-PGA for the first time. Under drought stress, transgenic maize significantly increased the ear length, ear weight and grain weight by 50 % compared to the control, whereas the yield characteristic of ear weight, grain number per ear, grain weight per ear and 100-grain weight increased by 1.67 %–2.33 %, 3.78 %–13.06 %, 8.41 %–22.06 %, 6.03 %–19.28 %, and 11.85 %–18.36 %, respectively under normal growth conditions. γ-PGA was mainly expressed in the mesophyll cells of maize leaf rosette structure and improved drought resistance and yield by protecting and increasing the expression of genes for the photosynthetic and carbon fixation. This study is an important exploration for maize drought stress molecular breeding and building resource-saving agriculture.

Transcriptomic analysis reveals the regulatory mechanisms of messenger RNA (mRNA) and long non-coding RNA (lncRNA) in response to waterlogging stress in rye (Secale cereale L.)

BackgroundWaterlogging stress (WS) negatively impacts crop growth and productivity, making it important to understand crop resistance processes and discover useful WS resistance genes. In this study, rye cultivars and wild rye species were subjected to 12-day WS treatment, and the cultivar Secale cereale L. Imperil showed higher tolerance. Whole transcriptome sequencing was performed on this cultivar to identify differentially expressed (DE) messenger RNAs (DE-mRNAs) and long non-coding RNAs (DE-lncRNAs) involved in WS response.ResultsAmong the 6 species, Secale cereale L. Imperil showed higher tolerance than wild rye species against WS. The cultivar effectively mitigated oxidative stress, and regulated hydrogen peroxide and superoxide anion. A total of 728 DE-mRNAs and 60 DE-lncRNAs were discovered. Among these, 318 DE-mRNAs and 32 DE-lncRNAs were upregulated, and 410 DE-mRNAs and 28 DE-lncRNAs were downregulated. GO enrichment analysis discovered metabolic processes, cellular processes, and single-organism processes as enriched biological processes (BP). For cellular components (CC), the enriched terms were membrane, membrane part, cell, and cell part. Enriched molecular functions (MF) terms were catalytic activity, binding, and transporter activity. LncRNA and mRNA regulatory processes were mainly related to MAPK signaling pathway-plant, plant hormone signal transduction, phenylpropanoid biosynthesis, anthocyanin biosynthesis, glutathione metabolism, ubiquitin-mediated proteolysis, ABC transporter, Cytochrome b6/f complex, secondary metabolite biosynthesis, and carotenoid biosynthesis pathways. The signalling of ethylene-related pathways was not mainly dependent on AP2/ERF and WRKY transcription factors (TF), but on other factors. Photosynthetic activity was active, and carotenoid levels increased in rye under WS. Sphingolipids, the cytochrome b6/f complex, and glutamate are involved in rye WS response. Sucrose transportation was not significantly inhibited, and sucrose breakdown occurs in rye under WS.ConclusionsThis study investigated the expression levels and regulatory functions of mRNAs and lncRNAs in 12-day waterlogged rye seedlings. The findings shed light on the genes that play a significant role in rye ability to withstand WS. The findings from this study will serve as a foundation for further investigations into the mRNA and lncRNA WS responses in rye.

Deciphering the mechanism of E3 ubiquitin ligases in plant responses to abiotic and biotic stresses and perspectives on PROTACs for crop resistance.

With global climate change, it is essential to find strategies to make crops more resistant to different stresses and guarantee food security worldwide. E3 ubiquitin ligases are critical regulatory elements that are gaining importance due to their role in selecting proteins for degradation in the ubiquitin-proteasome proteolysis pathway. The role of E3 Ub ligases has been demonstrated in numerous cellular processes in plants responding to biotic and abiotic stresses. E3 Ub ligases are considered a class of proteins that are difficult to control by conventional inhibitors, as they lack a standard active site with pocket, and their biological activity is mainly due to protein-protein interactions with transient conformational changes. Proteolysis-targeted chimeras (PROTACs) are a new class of heterobifunctional molecules that have emerged in recent years as relevant alternatives for incurable human diseases like cancer because they can target recalcitrant proteins for destruction. PROTACs interact with the ubiquitin-proteasome system, principally the E3 Ub ligase in the cell, and facilitate proteasome turnover of the proteins of interest. PROTAC strategies harness the essential functions of E3 Ub ligases for proteasomal degradation of proteins involved in dysfunction. This review examines critical advances in E3 Ub ligase research in plant responses to biotic and abiotic stresses. It highlights how PROTACs can be applied to target proteins involved in plant stress response to mitigate pathogenic agents and environmental adversities.

Effect of Waterlogging on Growth and Productivity of Fruit Crops

Τhe production of fresh fruit as well as olive orchards is increasing around the world, in order to meet the global demand for both fruits and olive products. This results in the spread and establishment of fruit and olive tree cultivation in areas where they were not found before, for example, plains and lowlands prone to waterlogging. Climate change is having a significant impact on the natural environment. Agricultural open-field crops have less growth and yield under these harsh weather conditions. Nowadays, unpredictable rainfall more often exposes field crops to waterlogging on a regular basis. This is a very stressful factor which can cause a reduction in yield and even total crop elimination. In this review, the morphological and physiological parameters affected by waterlogging are developed in order to understand better how olive and other fruit crops respond to waterlogging conditions and how this affects their development and productivity. Having a better understanding of these mechanisms can help us design strategies and approaches to increase fruit crop resistance to waterlogging stress.