Replant Problem Research Articles

Rhizospheric changes of fungal and bacterial communities in relation to soil health of multi-generation apple orchards

The study focused on changes of rhizosphere microbial communities in apple trees in long-term replanted orchards of Central Europe, aiming at developing cropping practices to mitigate replant problems. It started from the evidence of a previous study which showed that a slight modification of root-colonizing fungal communities was responsible for a great increase of plant growth in soil samples which had previously been subjected to a gamma-irradiation cycle (25kGy for 8h), as compared to that observed in the corresponding untreated native soils.The study was performed on rhizospheric soil from nine multi-generation apple orchards after a plant growth assay with M9 rootstock plantlets. PCR-DGGE analysis of soil DNA was performed to evaluate fungal and bacterial communities in fallow and replanted soils, as well as corresponding gamma-irradiated samples. Findings showed that rhizospheric fungal and bacterial communities within apple orchards did not differ according to their position within the orchard; while, they showed a shift in the gamma-irradiated soils. Pseudomonas fluorescens, Pseudomonas tolasii, Pseudomonas spp. and Novosphingobium spp. were the bacteria which were mainly attributed to this change. A shifting in composition of Fusarium communities toward Fusarium oxysporum and Fusarium equiseti resulted the most linked to the changes at rhizosphere level after re-colonization; to the contrary, Fusarium venenatum and Fusarium avenaceum, Truncatella sp. and Gibellolopsis sp., only occurred in native soils. Findings of this study suggest that disturbance events such as a gamma-irradiation can modify microbial communities in long-term apple orchards thus allowing a soil re-colonization suitable to increase soil suppressiveness.

Linking Soil Biotic and Abiotic Factors to Apple Replant Disease: a Greenhouse Approach

AbstractApple replant disease (ARD) is a frequently occurring plant disease, which causes retarded growth and mortality of young apple trees in replanted orchards. The aetiology is not well understood, but soil‐borne micro‐organisms are often discussed as primary causal agents of the replant problem. A greenhouse study was conducted in Laimburg, Italy, with orchard soils from the region, with the aim of obtaining information about the influence of soil biotic and abiotic factors on the aetiology of the disease. Apple rootstocks (M9) were planted into soils cultivated with apple trees that were either fumigated with chloropicrin or not fumigated, as well as mixtures of fumigated and non‐fumigated soils. In addition, uncultivated soils (from the inter‐row, from a fallow plot and from a meadow) were taken as controls. Various parameters were measured after 62 days in a controlled pot assay. Soils fumigated with chloropicrin resulted in higher apple shoot growth and lower microbial biomass carbon than non‐fumigated soils. Uncultivated soils had generally the highest microbial biomass carbon and the highest ergosterol contents. No considerable differences between basal respiration, ergosterol content, pH, electrical conductivity, and most nutrient and metal contents were observed between fumigated and non‐fumigated soils. Denaturing gradient gel electrophoresis gels of DNA extracted from the soils revealed differences in the fungal, bacterial and actinobacterial communities of the different soils, indicating significant shifts in microbial community composition after chloropicrin treatment. This study indicates biotic factors in soil to be a causal agent of apple replant disease.

Managing the almond and stone fruit replant disease complex with less soil fumigant

As much as one-third of California's almond and stone fruit acreage is infested with potentially debilitating plant parasitic nematodes, and even more of the land is impacted by Prunus replant disease (PRD), a poorly understood soilborne disease complex that suppresses early growth and cumulative yield in replanted almond and peach orchards. Preplant soil fumigation has controlled these key replant problems, but the traditional fumigant of choice, methyl bromide, has been phased out, and other soil fumigants are increasingly regulated and expensive. We tested fumigant and nonfumigant alternatives to methyl bromide in multiple-year replant trials. Costs and benefits were evaluated for alternative fumigants applied by shanks in conventional strip and full-coverage treatments and applied by shanks or drip in novel spot treatments that targeted tree planting sites. Short-term sudangrass rotation and prudent rootstock selection were examined as nonfumigant approaches to managing PRD. Trial results indicated that integrations of the treatments may acceptably control PRD with relatively little soil fumigant.

Evaluation of apple replant problems based on different soil disinfection treatments—links to soil microbial community structure?

Replant problems or soil sickness are known phenomena but still unsolved. The aims of this study were (i) to set up a test system for detecting replant problems using in vitro propagated apple rootstocks (M26) based on different soil disinfection treatments and (ii) to explore the treatment effects on root morphology and soil microbial community structure. The bio-test involved soil with apple replant problems (apple sick) and healthy soil from an adjacent plot, both either untreated, or submitted to treatments of 50 and 100 °C, or the chemical soil disinfectant Basamid. Histological analyses of roots and denaturing gradient gel electrophoresis (DGGE) fingerprints in rhizosphere soil collected at the final evaluation were performed. After 10 weeks, shoot dry mass on apple sick soil was 79, 108 and 124 % higher for soil treated at 50 °C, 100 °C and with Basamid, respectively, compared to the untreated soil. Roots in untreated apple sick soil showed destroyed epidermal and cortical layers. DGGE fingerprints revealed treatment dependent differences in community composition and relative abundance of total bacteria, Bacillus, Pseudomonas and total fungi. The clear differences detected in soil microbial communities are the first steps towards a better understanding of the causes for apple replant problems.

Subsurface drip application of alternative fumigants to methyl bromide for controlling nematodes in replanted grapevines

Many California grape growers use preplant fumigation to ensure uniform and healthy grapevine establishment in replant situations. A field study was conducted to evaluate the performance of subsurface drip-applied chemical alternatives to methyl bromide on plant-parasitic nematodes, plant vigor and fruit yield during the 6 year period following replanting. Subsurface drip fumigation with 1,3-dichloropropene plus chloropicrin and with iodomethane plus chloropicrin had generally similar nematicide activity as methyl bromide in three grape types, while sodium azide was less effective. The combination of 1,3-dichloropropene plus chloropicrin enhanced vine vigor similarly to methyl bromide. However, all plots treated with alternative fumigants produced less fruit yield than methyl bromide over the 4 years of evaluation. Subsurface drip fumigation with alternative chemicals to methyl bromide generally provided adequate management of plant-parasitic nematodes during the vine establishment period. However, further research is required to increase the performance of alternative chemicals against other components of the replant problem, as grape yield in vines grown in the alternative treatments was lower than in methyl bromide.

Seasonal fluctuation of nematode population in a citrus orchard having a replant problem

Seasonal fluctuation of nematode population in a citrus orchard having a replant problem

Effects of arbuscular mycorrhizae on microbial population and enzyme activity in replant soil used for watermelon production

Arbuscular mycorrhizal (AM) fungi are ubiquitous fungi distributed widely in soil ecosystems. It has been showed that AM fungi play an important role in improving soil nutrition and enhancing crop disease resistance, which have great application potentials in overcoming crop replant problems. In order to evaluate the effects of AM fungi on soil microbe population and soil enzyme activities in replant soils, three replant soils respectively with 3, 7, and 12 watermelon (Citrullus lanatus) replanting years were employed to be investigated. Results showed that the total soil microbe, bacteria, and actinomycete population, and the activities of soil proteinase, polyphenoloxidase, urease, and saccharase in replant soils gradually declined, while the fungal population, and the fungi/total microbe ratio increased, as replanting years rose. In each replant soil, the inoculation with AM fungus Glomus versiforme enhanced soil bacteria and actinomycete population, and decreased the fungal numbers, and the fungi/total microbe ratio in replanting soils, and improved soil proteinase, polyphenoloxidase, urease, and saccharase activities, compared with controls. That contributed to the relative equilibrium of the three kinds of soil microorganism populations. It is concluded that the AM fungal inoculation can reduce watermelon replant problems through effectively modifying the soil microbe population and community structure, and increasing the soil enzyme activities. International Journal of Engineering, Science and Technology, Vol. 2, No. 7, 2010, pp. 17-22

First Report of Grape Root Rot Caused by Roesleria subterranea in Michigan.

In September of 2008, declining grapevines were observed in two vineyards (Vitis interspecific hybrids 'Canada Muscat' and 'Chardonel') in Fennville, MI. Affected vines were stunted with shortened internodes and yellow leaves; others had dead cordons or were entirely dead. The grower reported that vines were losing vigor and collapsing during a period of 2 years. Renewal trunks would collapse during the second season of growth. Several symptomatic vines showed signs of root decay. On one vine, distinctive fruiting bodies (mazaedia) were apparent on the roots below the soil line and resembled those of Roesleria subterranea (Weinm.) Redhead (2,3,4). The mazaedia were 4 to 5 mm tall and 1 mm in diameter with white-to-tan stipes and powdery, gray-to-greenish hemispherical heads. Ascospores were hyaline to light grayish green, disk shaped, and 4 to 6 μm in diameter. This fungus, also known as R. hypogaea Thüm & Pass., has been previously reported to cause grape root rot, vine decline, and replant problems in North America and Europe (2,3,4). The fungus was cultured from ascospores on potato dextrose agar (PDA). Colonies grew slowly (approximately 2 mm per day at 22 to 24°C) and were green in the center. No spores were produced. DNA was extracted, and internal transcribed spacer (ITS) sequences obtained by PCR were compared with known sequences using BLASTn (1). Our isolate had 100% ITS sequence homology to an isolate from Germany, Roesleria subterranea strain IB (Accession No. EF060304.1). To test for pathogenicity, the fungus was grown in potato dextrose broth for 14 days at 22 to 24°C. An aqueous suspension (0.1 g of fungus per ml) was prepared by blending mycelia with sterile deionized water (SDW) in a food processor. Five two-node, rooted 'Chardonnay' cuttings (45 days old) were placed in the suspension. Five other cuttings were placed in SDW (control). After 3 h, plants were removed and repotted in fresh BACTO soil (Michigan Peat Company, Houston, TX) and kept in a growth chamber at 23°C with a 16/8-h light/dark cycle. After 25 days, inoculated plants were, on average, 63% smaller with 77% lower fresh-root weight and fewer fine roots than the control plants. The pathogen was recovered from surface-disinfested roots of all five inoculated plants but not from the control plants. Cultures appeared similar to the original isolate and their identity was confirmed by ITS sequencing. To our knowledge, this is the first report of R. subterranea on grapes in Michigan and the Midwest. This fungus needs to be recognized as a potential cause of vine decline and replant problems in Midwestern vineyards.

Allelochemicals and Activities in a Replanted Chinese Fir (Cunninghamia lanceolata (Lamb.) Hook) Tree Ecosystem

Autotoxicity is a major reason for replant problems in managed tree ecosystems. Studies have related phenolics-based allelochemicals to autotoxicity. We selected a 20-year-old replanted Chinese fir [Cunninghamia lancealata (Lamb.) Hook] tree ecosystem to isolate, identify, determine the biological activity of, and quantify soil phytotoxins. Eight common phenolics (coumarin, vanillin, isovanillin, and p-hydroxybenzoic, vanillic, benzoic, cinnamic, and ferulic acids), friedelin, and a novel cyclic dipeptide (6-hydroxy-1,3-dimethyl-8-nonadecyl-[1,4]-diazocane-2,5-diketone) were obtained by using the bioassay-guided isolation technique from toxic soil of the replanted Chinese fir tree ecosystem. Chemical structures were determined by spectroscopic means, including 2D-NMR (COSY, HMQC, HMBC, and NOESY) experiments. High concentrations of soil phenolics and friedelin were observed in the natural evergreen broadleaf forest (CK) rather than in the Chinese fir tree ecosystem. The phenolics and friedelin were not phytotoxic to Chinese fir trees. However, the cyclic dipeptide inhibited Chinese fir growth at soil concentrations determined in the replanted Chinese fir tree ecosystem. There was a significantly higher soil concentration of cyclic dipeptide in the replanted Chinese fir tree ecosystem than in a fresh Chinese fir tree ecosystem. The results suggest that phenolics and friedelin are not key allelochemicals since they are weakly phytotoxic and are detected in low concentrations in the replanted Chinese fir tree ecosystem, while cyclic dipeptide is a highly active allelochemical with a phytotoxic effect that limits offspring growth in the replanted Chinese fir tree ecosystem. The discovery of cyclic dipeptide, as well as a further understanding of its potential action mechanism in the replanted Chinese fir tree ecosystem, may contribute to solving the replant problems in managed tree ecosystems.

Response of ‘Jonagold’ Apple Trees in the First Three Years after Planting to Mono-Ammonium Phosphate Fertilization Under Replant Problem Conditions

The objective of the experiment was to examine response of immature apple trees to application of mono-ammonium phosphate (MAP) fertilizer on replant problem soil. The study was carried out during 2001–2003 under a greenhouse on ‘Jonagold’ apple trees/M.9 EMLA planted singly in 50 L polyethylene containers filled with a sandy loam soil with low status of both organic matter and phosphorus (P) in soil solution. This soil originated from an apple orchard unfertilized with P for 23 years. The biological test showed the presence of specific replant disease in the soil. Immediately before apple tree planting, the soil was mixed with MAP at rates of 1, 2, and 3 g L− 1. Trees grown in the soil untreated with MAP served as a control. Each year apple trees were drip-irrigated and supplied with nitrogen (N) at differentiated rates to achieve a level of 50 g N per plant. The results showed that MAP application increased soil solution P status. Simultaneously, MAP supply at rates of 2 and 3 g L− 1 caused a drop in soil pH value in the last two years of the experiment. MAP treatments increased both dry weight and length of fine roots (< 2 mm in diameter), vigor of trees, the number of flower clusters per tree, flower intensity, the number of fruits per tree, and P concentrations in leaf and fruit tissues. Fruits from MAP-supplied trees were firmer than those of the control trees. Mean fruit weight, titratable acidity, and soluble solids concentration of ‘Jonagold’ apples at harvest were not influenced by MAP treatment. Fruits from MAP-supplied apple trees had increased calcium concentration only in one year. It is concluded that pre-plant application of MAP at a rate of 1g L− 1can be recommended on coarse-textured soils with low P status in soil solution to increase precocity of apple trees. However, MAP-supplied apple trees have to be watered to avoid the risk of osmotic stress.

Replant diseases: Bacterial community structure and diversity in peach rhizosphere as determined by metabolic and genetic fingerprinting

Peach tree replant disease, though reported on in the literature for more than two centuries, has yet to have its causes clearly defined. Decline in peach productivity has been attributed to toxic agents, insects, nutritional disturbances, spray residues, fungi and nematodes. Bacteria has also been indicated as a contributing factor. Peach replant disease was reproduced by using two successive cultures on the same soil. Bacterial communities were isolated and characterized from healthy and diseased peach trees. The potential role of cyanide production by rhizobacteria in the replant problem of peaches was studied. Culture-dependent (evaluation of the number of culturable bacteria, metabolic activities, Biolog ® GN2) and independent (ribosomal intergenic spacer analysis, RISA) methods were used, in order to compare bacterial community structure and diversity in healthy and sick soils and to evaluate the possible role of cyanide. Bacterial densities were significantly increased in sick soils. Metabolic activities (Biolog ® GN2) and genetic structure, observed through RISA, were also significantly modified in sick soils. Changes in the composition of individual microbial groups in the rhizosphere of peach trees excavated from healthy or sick soil indicated the involvement of rhizobacteria in the etiology of the replant sickness of peach soil. More than 60% of the strains isolated from healthy soils corresponded to Pseudomonas sp. and 58% of the isolates from sick soils were Bacillus sp. This study determined that Bacillus were able to produce in vitro HCN. It also appeared that in sick soil, there was a shift in the structure of bacterial communities with an increase noted in phytotoxic microorganisms capable of producing HCN compounds.

Ground-penetrating Radar to Detect and Quantify Residual Root Fragments Following Peach Orchard Clearing

Consecutive replanting of peach (Prunus persica) trees on the same orchard site can result in various replant problems and diseases, including armillaria root disease (Armillaria spp.), which develops upon contact between the roots of newly planted trees and infested residual root pieces in the soil. There is little information regarding the quantity of roots remaining in stone fruit orchards following tree removal and land clearing. We investigated the utility of ground-penetrating radar (GPR) to characterize reflector signals from peach root fragments in a controlled burial experiment and to quantify the amount of residual roots remaining after typical commercial orchard clearing. In the former experiment, roots ranging from 2.5 to 8.2 cm in diameter and buried at depths of 11 to 114 cm produced characteristic parabolic reflector signals in radar profiles. Image analysis of high-amplitude reflector area indicated significant linear relationships between signal strength (mean pixel intensity) and root diameter (r = -0.517; P = 0.0097; n = 24) or the combined effects of root diameter and burial depth, expressed though a depth × diameter term (r = -0.630; P = 0.0010; n = 24). In a peach orchard in which trees and roots had been removed following typical commercial practice (i.e., trees were pushed over, burned, and tree rows subsoiled), a GPR survey of six 4 × 8-m plots revealed that the majority of reflector signals indicative of root fragments were located in the upper 30 to 40 cm of soil. Based on ground-truth excavation of selected sites within plots, reflectors showing a strong parabolic curvature in the radar profiles corresponded to residual root fragments with 100% accuracy, whereas those displaying a high amplitude area represented roots in 86.1% of the cases. By contrast, reflectors with both poor curvature and low amplitude yielded roots for less than 10% of the excavated sites, whereas randomly selected sites lacking reflector signals were devoid of any roots or other subsurface objects. A high level of variability in the number of residual roots was inferred from the radar profiles of the six plots, indicating an aggregated distribution of root fragments throughout the field. The data further indicated that at least one residual root fragment would be present per cubic meter of soil, and that many of these fragments have diameters corresponding to good to excellent inoculum potential for armillaria root disease. Further GPR surveys involving different levels of land clearing, combined with long-term monitoring of armillaria root disease incidence in replanted trees, will be necessary to ascertain the disease threat posed by the levels of residual root biomass observed in this study.

Grapevine and apple replant disease in Hungary

Field experiment was conducted to study the replant problems of grapevine and apple. Plantings were in three different fields: on virgin soil, on apple replant soil and on vine replant soil. Each field was planted with 60 pieces of grafted vine (variety Bianca on rootstock Berl. X Rip. T.K. 5BB) and 60 pieces of grafted apple (variety Gloster on rootstock MM. 106). Fungicide (BUVICID K with 50 % captan agent, 0.5 g/1 1 soil) and nematocide (VYDATE 10 G with 10 % oxamil agent, 0.03 g/1 I soil) treatments were used in the soil in order to identify the causal factor of the problem.&#x0D; Biological soil test was conducted to test 17 soil samples of II wine districts and vine growing fields in plastic pots, under shading net. No root pieces were left in the soil. Two bud-cuttings of the Bed. X Rip. T 5C rootstock varieties were used as test plants. In each case, samples were taken from the vineyard and from the virgin soil. One fourth of the soil from the vineyard was left untreated and the other three part was treated with nematocide, fungicide or heat.&#x0D; The results of the field experiment suggest that there was no problem growing grapevine after apple and apple after grapevine, but both species had been inhibited growing after itself. The fungicide and nematocide treatments did not succeed in determining the casual factor of the problem. Heat treatment of replant soil (in pot test) was useful in AS and VNS soils.&#x0D; Results of biological soil test suggest, that grapevine replant problem do not occur in every vineyard. In fifty percent of soils, no significant differences between the treatments for shoot length, weight of cane, length, diameter and wood:ratio of the fourth internode were observed. In one case, difference was not found in any of the measured characters. However, fruiting bodies of Roesleria pallida (Pers.)Sacc. and the mycelium of Rosellinia necatrix Prill. were observed in this sample. In other samples, there was no significant difference between the treatments, but nematode and fungus infection appeared to be involved in increased shoot growth in nematocide and fungicide treated plants (mycelium of Rosellinia necatrix was detected). In other samples, the fungus infection caused significant difference between the virgin, untreated and fungicide treated soils and infection of Rosellinia necatrix was observed.

Mouse-ear of Pecan: II. Influence of Nutrient Applications

Mouse-ear (ME) is a severe growth disorder affecting pecan [Carya illinoinensis (Wangenh.) K. Koch] trees from southeastern U.S. Gulf Coast Coastal Plain orchards. Slight to moderate ME was substantially corrected by foliar sprays of either Cu or GA3 shortly after budbreak, but sprays were ineffective for severely mouse-eared trees. Applications of Cu, S, and P to the soil surface of moderately affected trees corrected deficiencies after three years. Incorporation of Cu or P in backfill soils of newly planted trees prevented ME, whereas incorporation of Zn or Ca induced ME and Mn was benign. The severe form of ME, commonly exhibited by young trees, appears to be linked to a physiological deficiency of Cu and/or Ni at the time of budbreak. It likely occurs as a replant problem in second-generation orchards due to accumulation of soil Zn from decades of foliar Zn applications to correct Zn deficiency.

Mouse-ear of Pecan: I. Symptomatology and Occurrence

Mouse-ear (ME) is a potentially severe anomalous growth disorder affecting young pecan [Carya illinoinensis (Wangenh.) K. Koch] trees in portions of the Gulf Coast Coastal Plain of the southeastern United States. A survey of its incidence and severity found it to be commonly exhibited by replants on second-generation orchard sites, or where mature pecan trees previously grew. While most frequently observed as a replant problem, it also occasionally occurs at sites where pecan has not previously grown. The disorder is not graft transmissible and is only temporarily mitigated by pruning. Degree of severity within the tree canopy typically increases with canopy height. Several morphological and physiological symptoms for mouse-ear are described. Important symptoms include dwarfing of tree organs, poorly developed root system, rosetting, delayed bud-break, loss of apical dominance, reduced photoassimilation, nutrient element imbalance in foliage, and increased water stress. The overall symptomatology is consistent with a physiological deficiency of a key micronutrient at budbreak, that is influenced by biotic (e.g., nematodes) and abiotic (e.g., water and fertility management strategies) factors. A comparison of orchard soil characteristics between ME and adjacent normal orchards indicated that severely affected orchards typically possessed high amounts of soil Zn, Ca, Mg, and P, but low Cu and Ni; and were acidic and sandy in texture. The Zn: Cu ratio of soils appears to be a major factor contributing to symptoms, especially since ME severity increases as the Zn: Cu ratio increases. However, Ni may also be a factor as the Zn: Ni ratio is also larger in soils of ME sites. It is postulated that the “severe” form of mouse-ear is primarily due to the physiological deficiency of copper at budbreak, but may also be influenced by Ni and nematodes.

Grapevine - and apple - replant disease in Hungary

Field experiment was conducted to study the replant problems of grapevine and apple. Plantings were in three different fields: on virgin soil, on apple replant soil and on vine replant soil. Each field was planted with 60 pieces of grafted vine (variety Bianca on rootstock Berl. X Rip. T.K. 5BB) and 60 pieces of grafted apple (variety Gloster on rootstock MM. 106). Fungicide (BUVICID K with 50% captan agent, 0.5 g/1 1 soil) and nematocide (VYDATE 10 G with 10% oxamil agent, 0.03 g/1 1 soil) treatments were used in the soil in order to identify the causal factor of the problem.&#x0D; Biological soil test was conducted to test 17 soil samples of 11 wine districts and vine growing fields in plastic pots, under shading net. No root pieces were left in the soil. Two bud-cuttings of the Berl. X Rip. T 5C rootstock varieties were used as test plants. In each case, samples were taken from the vineyard and from the virgin soil. One fourth of the soil from the vineyard was left untreated and the other three part was treated with nematocide, fungicide or heat.&#x0D; The results of the field experiment suggest that there was no problem growing grapevine after apple and apple after grapevine, but both species had been inhibited growing after itself. The fungicide and nematocide treatments did not succeed in determining the casual factor of the problem. Heat treatment of replant soil (in pot test) was useful in AS and VNS soils.&#x0D; Results of biological soil test suggest, that grapevine replant problem do not occur in every vineyard. In fifty percent of soils, no significant differences between the treatments for shoot length, weight of cane, length, diameter and wood:ratio of the fourth internode were observed. In one case, difference was not found in any of the measured characters. However, fruiting bodies of Roesleria pallida (Pers.) Sacc. and the mycelium of Rosellinia necatrix Prill. were observed in this sample. In other samples, there was no significant difference between the treatments, but nematode and fungus infection appeared to be involved in increased shoot growth in nematocide and fungicide treated plants (mycelium of Rosellinia necatrix was detected). In other samples, the fungus infection caused significant difference between the virgin, untreated and fungicide treated soils and infection of Rosellinia necatrix was observed.

Replant problems in South Tyrol: role of fungal pathogens and microbial population in conventional and organic apple orchards

The South Tyrol, the main apple-growing area in Italy, is characterised by intensive soil cultivation. Previous investigations have revealed the existence of replant disorders although the main causes of these have not been evaluated. A survey was carried out in this area with two main aims: to evaluate the role of soil-borne pathogens in apple replant disease and to compare the impact of organic and conventional management on replant diseases caused by soil-borne pathogens. The experimental sites were chosen to obtain three pairs of contiguous conventional and organic apple orchards. There was a high level of organic matter in both the organic and the conventional apple orchards with no appreciable differences in humic fractions. The soil sickness test with apple seedlings revealed a significant reduction in growth for all soil samples as compared to the peat control. The growth score on soil samples from organic orchards was significantly higher than that obtained on conventional soil. Total fungal population in soil samples was positively correlated to the apple seedlings growth score and negatively correlated to the frequency of root colonisation. Most of the root-colonising pathogens belonged to the well-known root rot complex, Rhizoctonia solani and Pythium spp. being the most pathogenic on apple seedlings.

Malus Germplasm Varies in Resistance or Tolerance to Apple Replant Disease in a Mixture of New York Orchard Soils

We tested 40 seedling lots and 17 clonal accessions—representing 941 genotypes and 19 species or interspecific hybrids of Malus—for their resistance or tolerance to apple replant disease (ARD) in a mixture of five New York soils with known replant problems. Total plant biomass, root necrosis, root-infesting fungi, and root-lesion nematode (RLN; Pratylenchus penetrans Cobb) or dagger nematode (DN; Xiphinema americanum Cobb) populations were evaluated in apple seedlings and clones grown for ≈60 days in the composite soil. In addition to phytophagous nematodes, various Pythium, Cylindrocarpon, Fusarium, Rhizoctonia and Phytophthora species were isolated from roots grown in the test soil. Plant growth response was categorized by a relative biomass index (RBI), calculated as total plant dry weight in the pasteurized field soil (PS) minus that in an unpasteurized field soil (FS), divided by PS. Nematode reproduction on each genotype was defined by a relative reproduction index (RRI), calculated as final nematode populations in roots and soil (Pf) minus initial soil populations (Pi), divided by Pi. The RBI, RRI, and other responses of accessions to ARD soil were used to rate their resistance, tolerance, or susceptibility to apple replant disease. None of the accessions was completely resistant to ARD pathogens in our test soil. Seedling accessions of M. sieversii Roem. and M. kirghisorum Ponom. appeared to have some tolerance to ARD, based upon their low RRIs and RBIs. Three clonal rootstock accessions (G.65, CG.6210, and G.30), and four other clones (M. baccata Borkh.—1883.h, M. xanthocarpa Langenf.—Xan, M. spectabilis Borkh.— PI589404, and M. mandshurica Schneid.—364.s) were categorized as tolerant to ARD. The disease response of other accessions was rated as susceptible or too variable to classify. We concluded that sources of genetic tolerance to ARD exist in Malus germplasm collections and could be used in breeding and selecting clonal rootstocks for improved control of orchard replant pathogens.

Autotoxicity: Concept, Organisms, and Ecological Significance

The present review deals with the phenomenon of autotoxicity — a type of intraspecific allelopathy, where a plant species inhibits the growth of its own kind through the release of toxic chemicals into the environment. This phenomenon has been reported to occur in a number of weeds and crop plants in agroecosystem and wastelands causing the soil sickness. Besides, it plays a significant role in the orchards (of apple, pear, grapes, etc.) where it is the major reason of the replant problem, natural forests and coffee and tea plantations causing the regeneration problems. Not only the higher plants, but even some ferns and algae are also reported to show this phenomenon. Some plants have even developed extensive mechanisms to overcome this phenomenon, whereas the others have adapted to it by making structural and ecological changes providing to them a competitive ecological advantage over the others. Although autotoxicity is a natural phenomena providing selective benefit to the plant, yet the chemicals responsible for this have good potential for weed and pest management.

Autotoxicity: Concept, Organisms, and Ecological Significance

The present review deals with the phenomenon of autotoxicity — a type of intraspecific allelopathy, where a plant species inhibits the growth of its own kind through the release of toxic chemicals into the environment. This phenomenon has been reported to occur in a number of weeds and crop plants in agroecosystem and wastelands causing the soil sickness. Besides, it plays a significant role in the orchards (of apple, pear, grapes, etc.) where it is the major reason of the replant problem, natural forests and coffee and tea plantations causing the regeneration problems. Not only the higher plants, but even some ferns and algae are also reported to show this phenomenon. Some plants have even developed extensive mechanisms to overcome this phenomenon, whereas the others have adapted to it by making structural and ecological changes providing to them a competitive ecological advantage over the others. Although autotoxicity is a natural phenomena providing selective benefit to the plant, yet the chemicals responsible for this have good potential for weed and pest management.