Abstract This proposal of the “double carbon” goal underscores the pressing need to reduce carbon emissions. To address this issue, the utilization of an optimal scheduling model for an integrated multi-energy complementary system, comprising wind, solar storage, and thermal power generation, is proposed. Two renewable energy generating units, wind and photovoltaic power, cooperate with thermal power units to generate electricity to meet urban base load requirements. Energy storage units compensate for the instability of power generation from renewable energy units. To significantly decrease system carbon emissions, a green certificate trading-carbon emission trading system is introduced. The carbon emission reduction facilitated by the green certificate can offset a portion of the carbon emissions, and the quantities of tradable green certificates and carbon emissions in their respective markets are adjusted accordingly. This model aims to maximize the system’s comprehensive operating earnings while considering the low-carbon economy aspect. The proposed model undergoes simulation analysis, and the results demonstrate its reasonableness and efficacy in terms of carbon reduction and economic viability.