Complete porewater profiles from two peat bogs in the Jura Mountains were analysed for major and trace inorganic anions and cations. At La Tourbière des Genevez (TGe) and Etang de la Gruère (EGr), peat formation began approximately 5,000 and 10,000 years bp, respectively. The maximum depths of peat accumulation are 140 cm (TGe) and 650 cm (EGr); previous geochemical studies showed that the ombrogenic sections of the bogs extend to depths of approximately 20 cm (TGe) and 250 cm (EGr). Water samples were obtained using in situ diffusion equilibrium samplers (peepers), which allow filtered (0.2 μm) porewaters to be obtained while preventing degassing and oxidation. These samplers were found to be well suited to bog porewaters and allowed volatile (dissolved CO 2, acetate) and redox-sensitive species (HS −, Fe 2+) to be quantified without further sample preparation or treatment. Aqueous species concentrations were determined immediately afterwards using ion chromatography with either conductivity (acetate, HCO 3 −, Cl −, Br −, NO 3 −, HPO 4 2−, SO 4 2−, Na +, NH 4 +, K +, Mg 2+, Ca 2+), amperometry (HS −), or absorbance detection (Fe(III) and Fe(II)). The comprehensive analyses of anions and cations allowed humic substances to be calculated by the difference in electrical charge balance (i.e., the anion deficit). Concentrations of total dissolved CO 2 (2–12 mM) showed that carbonate equilibria play a significant role in the acid-base chemistry throughout the profiles. In near surface, ombrogenic porewaters with pH around 4, however, protons (approx. 160 μeq/L) are contributed mainly by the dissociation of humic substances (2–7 mM DOC). In the deepest, minerogenic layers H 2CO 3 is the predominant acid at both sites. At these depths, carbonate alkalinity (up to 3 meq/L at EGr, up to 8 meq/L at TGe) arises from reaction of the pore fluids with mineral matter in the underlying sediments. In the transition zone between the ombrogenic and minerogenic extremes, organic and inorganic acids are equal in importance. Unidentified organic S species accounted for 90–99% of total dissolved sulfur (S T) in the porewaters at TGe, with SO 4 2− and HS − the dominant inorganic species; S species with intermediate oxidation states such as SO 3 2− and S 2O 3 2− were always less than the detection limit of approximately 0.4 μM. At TGe the sulfate concentrations exceeded those of sulfide, with 1.25 and 0.25 μM, respectively, being typical. At EGr, S T and SO 4 2− were comparable to the waters at TGe, but HS − at EGr was always less than the detection limit of 0.15 μM. At both sites dissimilatory sulfate reduction is limited by the low concentrations of sulfate supplied to the bog surfaces (i.e., atmospheric deposition only), and the uptake of sulfate and its conversion to organic S compounds by the living plants. Despite the anoxic condition of the waters, the ratio of Fe(III) T to Fe(II) T was always high: at EGr this ratio was generally 1:1, and even in the sulfidic waters at TGe the ratio was 1:3. PHREEQE was used to calculate the effect of complex-forming organic ligands on {Fe 3+} and {Fe 2+} in these porewaters. The relatively high ratios of Fe(III) T compared to Fe(II) T can be explained in terms of the much greater thermodynamic stability of the organic complexes of Fe 3+ compared to those of Fe 2+.
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