The complex chemical composition of honey presents significant challenges for its analysis with variations influenced by factors such as botanical source, geographical location, bee species, harvest time, and storage conditions. This study aimed to employ high-performance thin-layer chromatography (HPTLC) fingerprinting, coupled with multivariate data analysis, to characterise the chemical profiles of Australian stingless bee honey samples from two distinct bee species, Tetragonula carbonaria and Tetragonula hockingsi. Using a mobile phase composed of toluene:ethyl acetate:formic acid (6:5:1) and two derivatisation reagents, vanillin–sulfuric acid and natural product reagent/PEG, HPTLC fingerprints were developed to reveal characteristic patterns within the samples. Multivariate data analysis was employed to explore the similarities in the fingerprints and identify underlying patterns. The results demonstrated that the chemical profiles were more closely related to harvest time rather than bee species, as samples collected within the same month clustered together. The quality of the clustering results was assessed using silhouette scores. The study highlights the value of combining HPTLC fingerprinting with multivariate data analysis to produce valuable data that can aid in blending strategies and the creation of reference standards for future quality control analyses.
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