The catchments of the Great Barrier Reef (GBR) have experienced significant modifications in recent decades, leading to increases in sources of pollutants and declines in coastal water quality. As coastal waters of the GBR support some of the highest density green turtle (Chelonia mydas) foraging populations in the western Pacific Ocean, understanding the effects of contaminants on GBR green turtle populations is a priority. In 2012, elevated strandings of green turtles in the Upstart Bay region instigated the WWF's collaborative Rivers to Reef to Turtles (RRT) project to investigate if coastal pollutants are compromising green turtle health. Important to interpreting these investigations into toxicology and health is understanding the demographics of the green turtle populations being investigated. In three green turtle foraging grounds, Cleveland Bay (CLV), Upstart Bay (UPB) and the Howick Group of Reefs (HWK), this study explored population size, age class structure, sex ratio, growth rates, body condition and diet, as well as indices of turtle health, such as plastron barnacle loads and eye lesions. The three foraging populations had similar age class structure and adult sex ratios to other green turtle foraging populations in the GBR. Somatic growth rate was nonlinear, peaking in immature turtles, and was much slower in turtles foraging at HWK compared to the other two sites. This may have been due to differences in food source, which was supported by the observed dietary shifts between seagrass and algae in HWK turtles, compared to a consistently seagrass diet in CLV and UPB turtles. There were also small differences in body condition between sites, as well as differences in barnacle loads, eye lesions and occurrence of fibropapilloma tumors. This study provides important information on green turtle foraging ground population dynamics in the northern GBR, and context for the other papers in this special issue.