Carbon Uptake Rates Research Articles

The daily effect is more important than the diurnal effect when shaping photosynthetic picoeukaryotes (PPEs) communities in Lake Taihu at a small temporal scale.

As major primary producers in aquatic systems, the diversity and community composition dynamics of photosynthetic picoeukaryotes (PPEs) have been investigated in recent years. Here, we explored the 3-day diurnal succession of the PPE community in a highly eutrophic lake in early spring using a combination of flow cytometric sorting and high-throughput sequencing. Our results showed that the PPEs were the dominant group of autotrophic picophytoplankton, although they had relatively low diversity and were dominated by the Stephanodiscaceae family in early spring in Lake Taihu. Furthermore, PPE abundance was significantly higher at night than during the day, probably due to their high specific rate of carbon uptake during the day and rapid proliferation at night. Several environmental variables had a significant influence on the PPE community composition, and the daily effect was more important than the diurnal effect when shaping the PPE community in Lake Taihu at a temporal scale of 3 days. Furthermore, based on the variation partitioning analysis (VPA), the relative importance of abiotic factors (deterministic processes) to short-term succession was low, explaining only 20.44% of the PPE community variation. We therefore conclude that stochastic processes determined PPE community assembly over a short temporal scale based on a neutral community model (NCM).

Proteome analysis of response to different spectral light irradiation in Synechocystis sp. PCC 6803

In cyanobacteria, it is known that the excitation ratios of photosystem (PS) I and PSII changes with the wavelength of irradiated light due to mobile phycobilisome (PBS) and spillover, affecting the photosynthetic ATP/NADPH synthesis ratio and metabolic flux state. However, the mechanisms by which these changes are controlled have not been well studied. In this study, we performed a targeted proteomic analysis of Synechocystis sp. PCC 6803 under different spectral light conditions to clarify the regulation mechanisms of mobile PBS, spillover and metabolisms under different light qualities at the protein level. The results showed an increase in the amount of proteins mainly involved in CO2 fixation under Red1 light conditions with a high specific growth rate, suggesting that the rate of intracellular metabolism is controlled by the rate of carbon uptake, not by changes in the amount of each enzyme. Correlation analysis between protein levels and PSI/PSII excitation ratios revealed that PsbQUY showed high correlations and significantly increased under Blue and Red2 light conditions, where the PSI/PSII excitation ratio was higher due to spillover. In the strains lacking the genes encoding these proteins, a decrease in the PSI/PSII excitation ratio was observed, suggesting that PsbQUY contribute to spillover occurrence. SignificanceIn cyanobacteria, the photosynthetic apparatus's responses, such as state transition [mobile PBS and spillover], occur due to the intensity and wavelength of irradiated light, resulting in changes in photosynthetic electron transport and metabolic flux states. Previous studies have analyzed the response of Synechocystis sp. PCC 6803 to light intensity from various directions, but only spectroscopic analysis of the photosynthetic apparatus has been done on the response to changes in the wavelength of irradiated light. This study analyzed the response mechanisms of mobile PBS, spillover, photosynthetic, and metabolic systems in Synechocystis sp. PCC 6803 under six different spectral light conditions by a targeted proteomic analysis. As a result, many proteins were successfully quantified, and the metabolic enzymes and photosynthetic apparatus were analyzed using an integrated approach. Principal component and correlation analyses and volcano plots revealed that the PSII subunits PsbQ, PsbU, and PsbY have a strong correlation with the PSI/PSII excitation ratio and contribute to spillover occurrence. Thus, statistical analysis based on proteome data revealed that PsbQ, PsbU, and PsbY are involved in spillover, as revealed by spectroscopic analysis.

Metabolic Reliance on Photosynthesis Depends on Both Irradiance and Prey Availability in the Mixotrophic Ciliate, Strombidium cf. basimorphum.

Many species of the ciliate genus Strombidium can acquire functional chloroplasts from a wide range of algal prey and are thus classified as generalist non-constitutive mixotrophs. Little, however, is known about the influence of irradiance and prey availability on their ability to exploit the photosynthetic potential of the chloroplasts, and how this may explain their spatial and temporal distribution in nature. In this study, inorganic carbon uptake, growth, and ingestion rates were measured for S. cf. basimorphum under three different irradiances (10, 40, and 120 μmol photons m–2 s–1) when acclimated to three different prey densities (5 × 103, 1 × 104, and 4 × 104 cells mL–1), as well as when allowed to deplete the prey. After prey depletion, cultures survived without prey longest (∼6 days) at the medium irradiance treatment (40 μmol photons m–2 s–1), while ciliate density, inorganic carbon uptake rates, and cellular chl-a content declined fastest at the highest irradiance treatment. This indicates that the ciliates may be unable to maintain the chloroplasts functionally without replacement at high irradiances. Ingestion rates were not shown to be significantly influenced by irradiance. The maximum gross growth efficiency (GGE) in this study (1.1) was measured in cultures exposed to the medium test irradiance and lowest prey density treatment (5 × 103 cells mL–1). The relative contribution of inorganic carbon uptake to the ciliate carbon budget was also highest in this treatment (42%). A secondary GGE peak (0.99) occurred when cultures were exposed to the highest test irradiance and the medium prey density. These and other results suggest that S. cf. basimorphum, and other generalist non-constitutive mixotrophs, can flexibly exploit many different environmental conditions across the globe.

Rubisco substitutions predicted to enhance crop performance through carbon uptake modelling.

Improving the performance of the CO2-fixing enzyme Rubisco is among the targets for increasing crop yields. Here, Earth system model (ESM) representations of canopy C3 and C4 photosynthesis were combined with species-specific Rubisco parameters to quantify the consequences of bioengineering foreign Rubiscos into C3 and C4 crops under field conditions. The 'two big leaf' (sunlit/shaded) model for canopy photosynthesis was used together with species-specific Rubisco kinetic parameters including maximum rate (Kcat), Michaelis-Menten constant for CO2 at ambient atmospheric O2 (Kc21%O2), specificity for CO2 to O2 (Sc/o), and associated heat activation (Ha) values. Canopy-scale consequences of replacing native Rubiscos in wheat, maize, and sugar beet with foreign enzymes from 27 species were modelled using data from Ameriflux and Fluxnet databases. Variation among the included Rubisco kinetics differentially affected modelled carbon uptake rates, and Rubiscos from several species of C4 grasses showed the greatest potential of >50% carbon uptake improvement in wheat, and >25% improvement in sugar beet and maize. This study also reaffirms the need for data on fully characterized Rubiscos from more species, and for better parameterization of 'Vcmax' and temperature response of 'Jmax' in ESMs.

Assessing the relevant time frame for temperature acclimation of leaf dark respiration: A test with 10 boreal and temperate species.

Plants often adjust their leaf mitochondrial ("dark") respiration (Rd ) measured at a standardized temperature such as 20°C (R20 ) downward after experiencing warmer temperatures and upward after experiencing cooler temperatures. These responses may help leaves maintain advantageous photosynthetic capacity and/or be a response to recent photosynthate accumulation, and can occur within days after a change in thermal regime. It is not clear, however, how the sensitivity and magnitude of this response change over time, or which time period prior to a given measurement best predicts R20 . Nor is it known whether nighttime, daytime, or 24-hour temperatures should be most influential. To address these issues, we used data from 1620 Rd temperature response curves of 10 temperate and boreal tree species in a long-term field experiment in Minnesota, USA to assess how the observed nearly complete acclimation of R20 was related to past temperatures during periods of differing lengths. We hypothesized that R20 would be best related to prior midday temperatures associated with both photosynthetic biochemistry and peak carbon uptake rates that drive carbohydrate accumulation. Inconsistent with this hypothesis, prior night temperatures were the best predictors of R20 for all species. We had also hypothesized that recent (prior 3-10days) temperatures should best predict R20 because they likely have stronger residual impacts on leaf-level physiology than periods extending further back in time, whereas a prior 1- to 2-day period might be a span shorter than one to which photosynthetic capacity and Rd adjust. There was little to no support for this idea, as for angiosperms, long time windows (prior 30-60 nights) were the best predictors, while for gymnosperms both near-term (prior 3-8 nights for pines, prior 10-14 nights for spruce/fir) and longer-term periods (prior 45 nights) were the best predictors. The importance of nighttime temperatures, the relatively long "time-averaging" that best explained acclimation, and dual peaks of temporal acclimation responsiveness in some species were all results that were unanticipated.

Bicarbonate uptake rates and diversity of RuBisCO genes in saline lake sediments.

There is limited knowledge of microbial carbon fixation rate, and carbon-fixing microbial abundance and diversity in saline lakes. In this study, the inorganic carbon uptake rates and carbon-fixing microbial populations were investigated in the surface sediments of lakes with a full range of salinity from freshwater to salt saturation. The results showed that in the studied lakes light-dependent bicarbonate uptake contributed substantially (>70%) to total bicarbonate uptake, while the contribution of dark bicarbonate uptake (1.35-25.17%) cannot be ignored. The light-dependent bicarbonate uptake rates were significantly correlated with pH and turbidity, while dark bicarbonate uptake rates were significantly influenced by dissolved inorganic carbon, pH, temperature and salinity. Carbon-fixing microbial populations using the Calvin-Benson-Bassham pathway were widespread in the studied lakes, and they were dominated by the cbbL and cbbM gene types affiliated with Cyanobacteria and Proteobacteria, respectively. The cbbL and cbbM gene abundance and population structures were significantly affected by different environmental variables, with the cbbL and cbbM genes being negatively correlated with salinity and organic carbon concentration, respectively. In summary, this study improves our knowledge of the abundance, diversity and function of carbon-fixing microbial populations in the lakes with a full range of salinity.

Relationship between dissolved organic carbon and oxygen uptake rate in growing media components

Relationship between dissolved organic carbon and oxygen uptake rate in growing media components

Evaluating nature-based solutions for climate mitigation and conservation requires comprehensive carbon accounting

Nature-based solutions (NbS) can address climate change, biodiversity loss, human well-being and their interactions in an integrated way. A major barrier to achieving this is the lack of comprehensiveness in current carbon accounting which has focused on flows rather than stocks of carbon and led to perverse outcomes. We propose a new comprehensive approach to carbon accounting based on the whole carbon cycle, covering both stocks and flows, and linking changes due to human activities with responses in the biosphere and atmosphere. We identify enhancements to accounting, namely; inclusion of all carbon reservoirs, changes in their condition and stability, disaggregated flows, and coverage of all land areas. This comprehensive approach recognises that both carbon stocks (as storage) and carbon flows (as sequestration) contribute to the ecosystem service of global climate regulation. In contrast, current ecosystem services measurement and accounting commonly use only carbon sequestration measured as net flows, while greenhouse gas inventories use flows from sources to sinks. This flow-based accounting has incentivised planting and maintaining young forests with high carbon uptake rates, resulting, perversely, in failing to reveal the greater mitigation benefit from protecting larger, more stable and resilient carbon stocks in natural forests. We demonstrate the benefits of carbon storage and sequestration for climate mitigation, in theory as ecosystem services within an ecosystem accounting framework, and in practice using field data that reveals differences in results between accounting for stocks or flows. Our proposed holistic and comprehensive carbon accounting makes transparent the benefits, trade-offs and shortcomings of NbS actions for climate mitigation and sustainability outcomes. Adopting this approach is imperative for revision of ecosystem accounting systems under the System of Environmental-Economic Accounting and contributing to evidence-based decision-making for international conventions on climate (UNFCCC), biodiversity (CBD) and sustainability (SDGs).

Characteristics of Different Size Phytoplankton for Primary Production and Biochemical Compositions in the Western East/Japan Sea.

The current phytoplankton community structure is expected to change, with small phytoplankton becoming dominant under ongoing warming conditions. To understand and evaluate the ecological roles of small phytoplankton in terms of food quantity and quality, the carbon uptake rates and intracellular biochemical compositions (i.e., carbohydrates, CHO; proteins, PRT; and lipids, LIP) of phytoplankton of different sizes were analyzed and compared in two different regions of the western East/Japan Sea (EJS): the Ulleung Basin (UB) and northwestern East/Japan Sea (NES). The average carbon uptake rate by the whole phytoplankton community in the UB (79.0 ± 12.2 mg C m–2 h–1) was approximately two times higher than that in the NES (40.7 ± 2.2 mg C m–2 h–1), although the average chlorophyll a (chl a) concentration was similar between the UB (31.0 ± 8.4 mg chl a m–2) and NES (28.4 ± 7.9 mg chl a m–2). The main reasons for the large difference in the carbon uptake rates are believed to be water temperature, which affects metabolic activity and growth rate, and the difference in euphotic depths. The contributions of small phytoplankton to the total carbon uptake rate were not significantly different between the regions studied. However, the rate of decrease in the total carbon uptake with increasing contributions from small phytoplankton was substantially higher in the UB than in the NES. This result suggests that compared to other regions in the EJS, the primary production in the UB could decrease rapidly under ongoing climate change. The calorific contents calculated based on biochemical compositions were similar between the small (1.01 ± 0.33 Kcal m–3) and large (1.14 ± 0.36 Kcal m–3) phytoplankton in the UB, whereas the biochemical contents were higher in the large phytoplankton (1.88 ± 0.54 Kcal m–3) than in the small phytoplankton (1.06 ± 0.18 Kcal m–3) in the NES. The calorific values per unit of chl a were higher for the large phytoplankton than for the small phytoplankton in both regions, which suggests that large phytoplankton could provide a more energy efficient food source to organisms in higher trophic levels in the western EJS.

Weak Response of Biological Productivity and Community Structure of Phytoplankton to Mesoscale Eddies in the Oligotrophic Philippine Sea

AbstractIn the Philippine Sea, mesoscale eddies have been frequently observed, but little is known about their contributions to the biological productivity and community structure of phytoplankton in the region. In situ carbon and nitrogen uptake rates and phytoplankton community structure were investigated in the Philippine Sea based on the 13C‐15N dual‐tracer technique and photosynthetic pigment analysis from late August to September 2018. Based on the comparison of the phytoplankton community structure among the cold eddy, warm eddy, and outer area, we found that the phytoplankton composition was different in the warm eddy with relatively lower contributions of large phytoplankton. However, a distinct enhancement in phytoplankton biomass over the euphotic zone was not detected even in eddy occurrence. In terms of community, the picoplankton Prochlorococcus was persistently dominant, which was attributed to a low supply and chemical composition of nutrients. The average integrated primary productions (IPP) were 80.4, 75.9, and 76.3 mg C m−2d−1 for the cold eddy, warm eddy, and outer area, respectively. The IPP under the eddy condition was not largely different from that in reference sites, even though the vertical distribution of productivity maximum was found to be different depending on eddy condition. These weak biological responses to mesoscale eddies might be attributed to the sustaining picoplankton‐dominant community structure and no substantial upward inputs of nutrients to the euphotic zone. Our findings represent an important contribution to understanding the biological response of mesoscale eddies in the oligotrophic Philippine Sea.

In Situ Rates of Carbon and Nitrogen Uptake by Phytoplankton and the Contribution of Picophytoplankton in Kongsfjorden, Svalbard

Rapid climate warming and the associated melting of glaciers in high-latitude open fjord systems can have a significant impact on biogeochemical cycles. In this study, the uptake rates of carbon and nitrogen (nitrate and ammonium) of total phytoplankton and picophytoplankton (<2 μm) were measured in Kongsfjorden in early May 2017 using the dual stable isotope technique. The daily uptake rates of total carbon and nitrogen ranged from 0.3 to 1.1 g C m−2 day−1, with a mean of 0.7 ± 0.3 g C m−2 day−1, and 0.13 to 0.17 g N m−2 day−1, with a mean of 0.16 ± 0.02 g N m−2 day−1. Microphytoplankton (20–200 μm) accounted for 68.1% of the total chlorophyll a (chl-a) concentration, while picophytoplankton (<2 μm) accounted for 19.6% of the total chl-a, with a high contribution to the carbon uptake rate (42.9%) due to its higher particulate organic carbon-to-chl-a ratio. The contributions of picophytoplankton to the total nitrogen uptake rates were 47.1 ± 10.6% for nitrate and 74.0 ± 16.7% for ammonium. Our results indicated that picophytoplankton preferred regenerated nitrogen, such as ammonium, for growth and pointed to the importance of the role played by picophytoplankton in the local carbon uptake rate during the early springtime in 2017. Although the phytoplankton community, in terms of biovolume, in all samples was dominated by diatoms and Phaeocystis sp., a higher proportion of nano- and picophytoplankton chl-a (mean ± SD = 71.3 ± 16.4%) was observed in the relatively cold and turbid surface water in the inner fjord. Phytoplankton production (carbon uptake) decreased towards the inner fjord, while nitrogen uptake increased. The contrast in carbon and nitrogen uptake is likely caused by the gradient in glacial meltwater which affects both the light regime and nutrient availability. Therefore, global warming-enhanced glacier melting might support lower primary production (carbon fixation) with higher degrees of regeneration processes in fjord systems.

Intense but variable autotrophic activity in a rapidly flushed shallow-water hydrothermal plume (Kueishantao Islet, Taiwan).

Shallow-water hydrothermal plumes concomitantly host both photosynthetic and chemoautotrophic organisms in a single biotope. Yet, rate measurements to quantify the contributions of different autotrophic activity types are scarce. Herein, we measured the light and dark dissolved inorganic carbon (DIC) uptake rates in the plume water of the Kueishantao hydrothermal field using the 13 C-labeling approach. Seventy percent of the plume-water samples had chemoautotrophy as the dominant mode of carbon fixation, with the dark DIC uptake rates (up to 18.6mg C/m3 /h) within the range of the primary production in productive inner-shelf waters. When considered alongside the geochemical and microbiological observations, the rate data reveal the distribution of different trophic activities in the hydrothermal plume. The autotrophic activity at the initial phase of plume dispersal is low. This is explained by the short response time the chemoautotrophs have to the stimulation from vent-fluid discharge, and the harmful effects of hydrothermal substances on phytoplankton. As plume dispersal and mixing continue, chemoautotrophic activities begin to rise and peak in waters that have low-to-moderate Si(OH)4 content. Toward the plume margin, chemoautotrophy declines to background levels, whereas photosynthesis by phytoplankton regains importance. Our results also provide preliminary indication to the loci of enhanced heterotrophy in the plume. Results of artificial mixing experiments suggest that previously formed plume water is the primary source of microbial inoculum for new plume water. This self-inoculation mechanism, in combination with the intense DIC uptake, helps to sustain a distinct planktonic autotrophic community in this rapidly flushed hydrothermal plume.

Growing‐season warming and winter soil freeze/thaw cycles increase transpiration in a northern hardwood forest

Climate models project higher growing-season temperatures and a decline in the depth and duration of winter snowpack throughout many north temperate ecosystems over the next century. A smaller snowpack is projected to induce more frequent soil freeze/thaw cycles in winter in northern hardwood forests of the northeastern United States. We measured the combined effects of warmer growing-season soil temperatures and increased winter freeze/thaw cycles on rates of leaf-level photosynthesis and transpiration (sap flow) of red maple (Acer rubrum) trees in a northern hardwood forest at the Climate Change Across Seasons Experiment at Hubbard Brook Experimental Forest in New Hampshire. Soil temperatures were warmed 5°C above ambient temperatures during the growing season and soil freeze/thaw cycles were induced in winter to mimic the projected changes in soil temperature over the next century. Relative to reference plots, growing-season soil warming increased rates of leaf-level photosynthesis by up to 85.32±4.33%, but these gains were completely offset by soil freeze/thaw cycles in winter, suggesting that increased freeze/thaw cycles in winter over the next 100yr will reduce the effect of warming on leaf-level carbon gains. Soil warming in the growing season increased rates of transpiration per kilopascal of vapor pressure deficit (VPD) by up to 727.39±0.28%, even when trees were exposed to increased frequency of soil freeze/thaw cycles in the previous winter, which could influence regional hydrology in the future. Using climate projections downscaled from the Coupled Model Intercomparison Project, we project increased rates of whole-season transpiration in these forests over the next century by 42-61%. We also project 52-77 additional days when daily air temperatures will be above the long-term average daily maximum during the growing season at Hubbard Brook. Together, these results show that projected changes in climate across both the growing season and winter are likely to cause greater rates of water uptake and have no effect on rates of leaf-level carbon uptake by trees, with potential ecosystem consequences for hydrology and carbon cycling in northern hardwood forests.

On-line monitoring of photosynthetic activity based on pH data to assess microalgae cultivation

Microalgae performance of outdoor cultivation systems is influenced by environmental and operating dynamics. Monitoring and control systems are needed to maximise biomass productivity and nutrient recovery. The goal of this work was to corroborate that pH data could be used to monitor microalgae performance by means of data from an outdoor membrane photobioreactor (MPBR) plant. In this system, microalgae photosynthetic activity was favoured over other physical and biological processes, so that the pH data dynamics was theoretically related to the microalgae carbon uptake rate (CUR). Short- and long-term continuous operations were tested to corroborate the relationship between the first derivate of pH data dynamics (pH’) and microalgae photosynthetic activity. Short-term operations showed a good correlation between gross pH’ values and MPBR performance. An indicator of the maximum daily average microalgae activity was assessed by a combination of on-line pH’ measurements obtained in the long-term and a microalgae growth kinetic model. Both indicators contributed to the development of advanced real-time monitoring and control systems to optimise microalgae cultivation technology.

Ecophysiological traits of mixotrophic Strombidium spp

Abstract Ciliates represent an important trophic link between nanoplankton and mesoplankton. Many species acquire functional chloroplasts from photosynthetic prey, being thus mixotrophs. Little is known about which algae they exploit, and of the relevance of inorganic carbon assimilation to their metabolism. To get insights into these aspects, laboratory cultures of three mixotrophic Strombidium spp. were established and 35 photosynthetic algal species were tested as prey. The relative contributions of ingestion and photosynthesis to total carbon uptake were determined, and responses to prey starvation were studied. Ciliate growth was supported by algal species in the 2–12 μm size range, with cryptophytes and chlorophytes being the best prey types. Inorganic carbon incorporation was only quantitatively important when prey concentration was low (3–100 μgCL−1), when it led to increased gross growth efficiencies. Chla specific inorganic carbon uptake rates were reduced by 60–90% compared to that of the photosynthetic prey. Inorganic carbon uptake alone could not sustain survival of cultures and ciliate populations declined by 25–30% during 5 days of starvation. The results suggest that mixotrophy in Strombidium spp. may substantially bolster the efficiency of trophic transfer when biomass of small primary producers is low.

Combining eddy covariance measurements with process-based modelling to enhance understanding of carbon exchange rates of dairy pastures

Many temperate grasslands are used for dairying, and ongoing research aims to better understand these systems in order to increase animal production and soil organic carbon (SOC) stocks. However, it is difficult to fully understand management effects on SOC because most changes are slow and difficult to distinguish from natural variability, even if changes are important over years to decades. Eddy covariance (EC) measurements can overcome this problem by continuously measuring net carbon exchange from pastures, but net balances are very sensitive to even small systematic measurement errors. Combining EC measurements with detailed process-based modelling can reduce the risks inherent in total reliance on EC measurements. Modelling can also reveal information about the underlying processes that drive observed fluxes.Here, we describe carbon exchange patterns of five paddocks situated at four different locations in New Zealand and France where EC data and detailed physiological modelling were available. The work showed that respiration by grazing animals was often only incompletely captured in EC measurements. This was most problematic when fluxes were based on gap-filling, which could have estimated incorrect fluxes during grazing periods based on observations from periods without grazing. We then aimed to extract plant physiological insights from these studies. We found appreciable carbon uptake rates even at temperatures below 0 °C. After grazing, carbon uptake was reduced for up to 2 weeks. This reduction was larger than expected from reduced leaf area after grazing, but the factors contributing to that difference have not yet been identified.Detailed physiological models can also extrapolate findings to new management regimes, environmental conditions or plant attributes. This overcomes the limitation of experimental studies, which are necessarily restricted to actual site and weather conditions allowing models to make further progress on predicting management effects on SOC.

Carbon and nitrogen uptake rates and macromolecular compositions of bottom-ice algae and phytoplankton at Cambridge Bay in Dease Strait, Canada

AbstractOur understanding of ice algal responses to the recent changes in Arctic sea ice is impeded by limited field observations. In the present study, environmental characteristics of the landfast sea-ice zone as well as primary production and macromolecular composition of ice algae and phytoplankton were studied in the Kitikmeot Sea near Cambridge Bay in spring 2017. Averaged total chlorophyll-a(Chl-a) concentration was within the lower range reported previously for the same region, while daily carbon uptake rates of bottom-ice algae were significantly lower in this study than previously reported for the Arctic. Based on various indicators, the region's low nutrient concentrations appear to limit carbon uptake rates and associated accumulation of bottom-ice algal biomass. Furthermore, the lipids-dominant biochemical composition of bottom-ice algae suggests strong nutrient limitation relative to the distinctly different carbohydrates-dominant composition of phytoplankton. Together, the results confirm strong nitrate limitation of the local marine system.

Transparent Exopolymer Particle (TEPs) Dynamics and Contribution to Particulate Organic Carbon (POC) in Jaran Bay, Korea

Transparent exopolymer particles (TEPs) are defined as acidic polysaccharide particles and they are influenced by various biotic and abiotic processes that play significant roles in marine biogeochemical cycles. However, little information on their monthly variation, relationship and contribution to particulate organic carbon (POC) is currently available particularly in coastal regions. In this study, the water samples were collected monthly to determine TEP concentrations and POC concentrations in a southern coastal region of Korea, Jaran Bay from April 2016 to March 2017. The TEP concentrations varied from 26.5 to 1695.4 μg Xeq L−1 (mean ± standard deviation (S.D.) = 215.9 ± 172.2 μg Xeq L−1) and POC concentrations ranged from 109.9 to 1201.9 μg L−1 (mean ± S.D. = 399.1 ± 186.5 μg L−1) during our observation period. Based on the 13C stable isotope tracer technique, monthly carbon uptake rates of phytoplankton ranged from 3.0 to 274.1 mg C m−2 h−1 (mean ± S.D. = 34.5 ± 45.2 mg C m−2 h−1). The cross-correlation analysis showed a lag-time of 2 months between chlorophyll a and TEP concentrations (r = 0.86, p < 0.01; Pearson’s correlation coefficient). In addition, we observed a 2 month lag-phased correlation between TEP concentrations and primary production (r = 0.73, p < 0.05; Pearson’s correlation coefficient). In Jaran Bay, the TEP contribution was as high as 78.0% of the POC when the TEP-C content was high and declined to 2.4% of the POC when it was low. These results showed that TEP-C could be a significant contributor to the POC pool in Jaran Bay.

Global quantitative synthesis of ecosystem functioning across climatic zones and ecosystem types

AbstractAimProviding a quantitative overview of ecosystem functioning in a three‐dimensional space defined by ecosystem stocks, fluxes and rates, across major ecosystem types and climatic zones.LocationGlobal.Time period1966–2019.Major taxa studiedEcosystem‐level measurements (all organism types).MethodsWe conducted a global quantitative synthesis of a wide range of ecosystem variables related to carbon stocks and fluxes. We gathered a total of 4,479 values from 1,223 individual sites (unique geographical coordinates) reported in the literature (604 studies), covering ecosystem variables including biomass and detritus stocks, gross primary production, ecosystem respiration, detritus decomposition and carbon uptake rates, across eight major aquatic and terrestrial ecosystem types and five broad climatic zones (arctic, boreal, temperate, arid and tropical). We analysed the relationships among variables emerging from the comparisons of stocks, fluxes and rates across ecosystem types and climates.ResultsWithin our three‐dimensional functioning space, average ecosystems align along a gradient from fast rates–low fluxes and stocks (freshwater and pelagic marine ecosystems) to low rates–high fluxes and stocks (forests), a gradient that we hypothesize results mainly from variation in primary producer characteristics. Moreover, fluxes and rates decrease from warm to colder climates, consistent with the metabolic theory of ecology. However, the strength of climatic effects differs among variables and ecosystem types, resulting, for instance, in opposing effects on net ecosystem production between terrestrial and freshwater ecosystems (positive versus negative effects).Main conclusionsThis large‐scale synthesis provides a first quantified cross‐ecosystem and cross‐climate comparison of multivariate ecosystem functioning. This gives a basis for a mechanistic understanding of the interdependency of different aspects of ecosystem functioning and their sensitivity to global change. To anticipate responses to change at the ecosystem level, further work should investigate potential feedbacks between ecosystem variables at finer scales, which involves site‐level quantifications of multivariate functioning and theoretical developments.

Major controlling factors for spatio-temporal variations in the macromolecular composition and primary production by phytoplankton in Garolim and Asan bays in the Yellow Sea

Little information on phytoplankton is currently available for Garolim and Asan bays, which are important spawning and nursery grounds for various commercial fish. The objectives of this study were to investigate the spatial and seasonal variations in the biochemical components (carbohydrates, proteins, and lipids) and primary production by phytoplankton and to determine the major environmental factors controlling the variations in Garolim and Asan bays. All major inorganic nutrients were seasonally available to phytoplankton although PO4 concentrations were relatively lower than those of other nutrients. The chlorophyll-a (chl-a) concentration measured in this study was within the range reported previously and the phytoplankton community was mostly dominated by micro- and nano-phytoplankton (approximately 80 %). Among the different biochemical compositions, carbohydrates were the most dominant throughout our observation period. As a nitrogen source for phytoplankton growth, ammonium was more important compared to nitrate in Garolim and Asan bays because of a significantly high uptake rate of the ammonium observed in this study. The overall mean areal daily carbon uptake rate (238.8 ± 393.3 mg C m−2 d−1) measured in this study is within the range in various bays and coastal waters in Korea. The concentrations of SiO2, NO2+NO3 and micro-sized chl-a were found to be major factors for the variation in the biochemical compositions of phytoplankton. By comparison, the nano-sized chl-a concentration, NH4 concentration and temperature were observed to be major factors in the variation in the carbon uptake rate of phytoplankton in Garolim and Asan bays during our observation period. Further studies on macromolecular compositions and primary production from different cell-sized phytoplankton are warranted for a better understanding their potential effects on marine ecosystems.