Rarefied Species Richness Research Articles

Species richness of seed plants and ferns along a temperate elevational gradient in central Japan

We evaluated richness patterns of all vascular plants in central Japan with respect to spatial and climatic factors. This evaluation was performed by analysing a database that contained information on 150,806 herbarium specimens from this region. We analysed the area-corrected and rarefied species richness of all vascular plants, seed plants and ferns at 100-m elevational bands. The area-corrected species richness showed an asymmetric hump-shaped pattern for total and seed plants with a plateau in a higher elevation, whereas fern species richness showed a decreasing pattern. The rarefied species richness showed a low-plateau pattern in all cases because of the low threshold; however, species richness by rarefaction of specimens down to a higher threshold supported the area-corrected pattern. Thus, we concluded that total and seed plant richness showed a hump-shaped pattern, and that fern richness showed a decreasing pattern. Area, temperature and precipitation were significantly correlated with species richness, and climatic factors explained more variation in species richness of ferns compared with that of seed plants. When the species were divided based on range size, climatic factors explained more variation in small-ranged species richness than spatial factors, whereas spatial factors did so in large-ranged species richness. In addition, small-ranged species richness of seed plants showed a bimodal pattern with peaks at low elevation and high elevation probably because the mountains in central Japan play a role as refugia for Japanese alpine plants during climatic oscillations, or an artefact.

Coarse root biomass distribution characteristics in a Chinese subtropical evergreen broadleaved forest

Coarse root distribution and biomass are important characteristics in ecological studies on forest ecosystems. Traditional methods for sampling coarse roots are destructive, time-consuming and laborious, which limits the collection of data for estimating carbon storage/sequestration at the whole ecosystem level. Furthermore, there have been few studies on the relationships between coarse root biomass and abiotic and biotic factors. In this study, the coarse root biomass and distribution were investigated using a ground-penetrating radar technique in a 24-hm2 old-growth subtropical broadleaved forest plot in Gutianshan, Zhejiang Province, China. The mean of the coarse root biomass across 15 quadrats was 1105.38 g m-2 for soil depth of 0-60 cm. The habitat and altitude had significant ( P P P < 0.01) linear regression between the coarse root biomass and soil total carbon content and nitrogen mineralization rate occurred. Topographic traits had no significant effects on coarse root biomass distribution. The coarse root biomass decreased with an increase in tree species richness and rarefied tree species richness at 40-60 cm and this accounted for 53.2% and 29.2% of the variation, respectively. Tree species richness and rarefied tree species richness had a closer relationship with coarse root biomass than the dominant tree species abundance did. The resource variations across the 24-hm2 Gutianshan plot might contribute to the difference in tree species abundance, and the tree species richness and rarefied tree species richness had significant effects on the coarse root biomass. This study shows that the ground-penetrating radar technique has great potential for coarse root studies in forest ecosystems.

A Comparison of Resident Fish Assemblages in Managed and Unmanaged Coastal Wetlands in North Carolina and South Carolina

Abstract The dominant fish species within impounded coastal wetlands in the southeastern US may be different from the species that dominate natural marshes. We tested the hypothesis that resident fish assemblages inhabiting impounded coastal wetlands in South Carolina would differ from resident assemblages in natural marshes of the southeastern United States. We used rarefied species richness, Shannon's H' diversity, J' evenness, Morisita's index of similarity, and the percent similarity index to compare resident fish assemblages from two impoundments to 12 open-marsh resident fish assemblages from previously published studies in North and South Carolina. We used rotenone to sample fish assemblages in impoundments. The assemblages in natural marsh habitat had been sampled with rotenone and seines. We classified comparisons yielding a similarity index ≥0.50 as moderately similar and those with an index ≥0.75 as very similar. Fifty-three percent of the among-impoundment comparisons (Morisita's index) were a...

A Comparison of Resident Fish Assemblages in Managed and Unmanaged Coastal Wetlands in North Carolina and South Carolina

The dominant fish species within impounded coastal wetlands in the southeastern US may be different from the species that dominate natural marshes. We tested the hypothesis that resident fish assemblages inhabiting impounded coastal wetlands in South Carolina would differ from resident assemblages in natural marshes of the southeastern United States. We used rarefied species richness, Shannon's H' diversity, J' evenness, Morisita's index of similarity, and the percent similarity index to compare resident fish assemblages from two impoundments to 12 open-marsh resident fish assemblages from previously published studies in North and South Carolina. We used rotenone to sample fish assemblages in impoundments. The assemblages in natural marsh habitat had been sampled with rotenone and seines. We classified comparisons yielding a similarity index ≥0.50 as moderately similar and those with an index ≥0.75 as very similar. Fifty-three percent of the among-impoundment comparisons (Morisita's index) were at least moderately similar, whereas 7% of impoundment—natural marsh comparisons were moderately similar. A difference in tidal influence was the only parameter in the best-fitting model describing the observed Morisita's indices. The index of similarity decreased by 63% when tidal influence differed between compared assemblages. Species richness and diversity were greater in impoundments than natural marshes, but evenness was similar between habitat types. Our results support the hypothesis that resident fish assemblages in impounded wetlands and natural marshes are different, and suggest that a degree of tidal influence is the most important factor behind the difference.

Assessing spider diversity on the forest floor: expert knowledge beats systematic design

The design of sampling schemes affects the results of biodiversity inventories. As an approach for quantifying the implications of such effects, we compared data on spider communities sampled in a beech-dominated forest floor habitat by 1) a regular grid of pitfall traps (systematic design) and 2) an expert-based distribution of traps (stratified design). We tested whether the two designs would lead to similar conclusions about the diversity and composition of ground-dwelling spider communities. Estimates of species richness, rarefied species richness and activity density calculated per trap were significantly higher in the stratified than in the systematic design. The community composition based on the presence or absence of sampled species or based on log-transformed activity densities differed significantly. Most of the dissimilarity between the community estimates of the two designs was attributable to three species, with Pardosa saltans Topfer-Hofmann 2000 being more common in traps of the stratified design and Tenuiphantes zimmermanni (Bertkau 1890) and Walckenaeria cuspidata Blackwall 1833 being more frequently observed in traps of the systematic design. Our study suggests that a stratified sampling design is better suited for inventory surveys of spider communities of forest-floor habitats, as trap locations of this design reflect specific habitat needs. It is important to note that inventories are a major field for the application of such designs and that greater care is needed for the application of inferential statistics. For example, the non-randomness that is caused by expert selection of sampling sites may violate fundamental assumptions of simple linear models.

Landscape-scale crop diversity interacts with local management to determine ground beetle diversity

Crop diversification and maintenance of semi-natural habitats (grasslands and field boundaries) are suggested to enhance farmland biodiversity, but the relative importance of these factors remains poorly known. We evaluated how crop diversity and availability of semi-natural grasslands at a landscape-scale interacted with local farming management (three management types from low to high intensity: ley<winter wheat<sugar beet) in their effect on ground beetle assemblages in southern Sweden. Ground beetle diversity increased with crop diversity either independently of local management (Simpson species diversity), or only in the less intensively managed habitats (rarefied species richness). While ground beetle diversity in leys tended to increase with field boundary length, no such relationship was observed in winter wheat or sugar beet fields. In contrast, the landscape proportions of leys and semi-natural grasslands did not affect ground beetle species richness and diversity. We conclude that (a) semi-natural grasslands and leys may not function as source habitats at a landscape-scale if they comprise a low proportion of the total land-use, while (b) increasing crop diversity is correlated to ground beetle richness and diversity in agricultural landscapes dominated by arable land. The beneficial effect of landscape-scale crop diversification on farmland biodiversity may depend on the general level of agricultural intensity of a region.

Mosquito Vector Diversity across Habitats in Central Thailand Endemic for Dengue and Other Arthropod-Borne Diseases

Recent years have seen the greatest ecological disturbances of our times, with global human expansion, species and habitat loss, climate change, and the emergence of new and previously-known infectious diseases. Biodiversity loss affects infectious disease risk by disrupting normal relationships between hosts and pathogens. Mosquito-borne pathogens respond to changing dynamics on multiple transmission levels and appear to increase in disturbed systems, yet current knowledge of mosquito diversity and the relative abundance of vectors as a function of habitat change is limited. We characterize mosquito communities across habitats with differing levels of anthropogenic ecological disturbance in central Thailand. During the 2008 rainy season, adult mosquito collections from 24 sites, representing 6 habitat types ranging from forest to urban, yielded 62,126 intact female mosquitoes (83,325 total mosquitoes) that were assigned to 109 taxa. Female mosquito abundance was highest in rice fields and lowest in forests. Diversity indices and rarefied species richness estimates indicate the mosquito fauna was more diverse in rural and less diverse in rice field habitats, while extrapolated estimates of true richness (Chao1 and ACE) indicated higher diversity in the forest and fragmented forest habitats and lower diversity in the urban. Culex sp. (Vishnui subgroup) was the most common taxon found overall and the most frequent in fragmented forest, rice field, rural, and suburban habitats. The distributions of species of medical importance differed significantly across habitat types and were always lowest in the intact, forest habitat. The relative abundance of key vector species, Aedes aegypti and Culex quinquefasciatus, was negatively correlated with diversity, suggesting that direct species interactions and/or habitat-mediated factors differentially affecting invasive disease vectors may be important mechanisms linking biodiversity loss to human health. Our results are an important first step for understanding the dynamics of mosquito vector distributions under changing environmental features across landscapes of Thailand.

Pervasive, long-lasting impact of historical logging on composition, diversity and above ground carbon stocks in Afrotemperate forest

Understanding the rate and extent of forest recovery from major disturbance events enable forest managers to establish conservation priorities and allocate limited resources for their management. We examined the extent to which Afrotemperate forest has recovered from widespread, stand-levelling logging that followed the European settlement of south eastern South Africa approximately 150years ago. We used plot-based tree census data to compare ecological characteristics (diversity, composition, structure) of primary, secondary and degraded Afrotemperate forests. Forests impacted by colonial logging events show no evidence of converging on the composition and above ground standing stock of old-growth forests. Primary forest canopies were dominated by two conifer species (Podocarpaceae) and a suite of long-lived pioneer angiosperms dominated the canopies of secondary forests. Old-growth canopy trees (⩾20cmdbh) were taller (∼26m vs ∼16m) and had broader girths (∼94cm vs ∼54cm) compared with those in secondary forest. Canopy tree size differences translated to considerable (2 to 3-fold) differences in above ground carbon: we estimated that primary forest stores >240MgCha−1 compared with the range of 80.7–114.3MgCha−1 estimated for the two secondary forests and 84.3MgCha−1 for the degraded forest. Measures of rarefied species richness and diversity (Shannon exponential) were markedly lower for primary forest canopy trees, consistent with the proposition that the composition of Afrotemperate forests converges on podocarp dominance at the old-growth stage. In contrast, diversity measures for small (2.5–10.0cmdbh) and medium (10.1–19.9cmdbh) trees were noticeably higher in secondary and degraded forests indicating the considerable conservation value of these formerly disturbed forests.

Scale‐dependent effect sizes of ecological drivers on biodiversity: why standardised sampling is not enough

There is little consensus about how natural (e.g. productivity, disturbance) and anthropogenic (e.g. invasive species, habitat destruction) ecological drivers influence biodiversity. Here, we show that when sampling is standardised by area (species density) or individuals (rarefied species richness), the measured effect sizes depend critically on the spatial grain and extent of sampling, as well as the size of the species pool. This compromises comparisons of effects sizes within studies using standard statistics, as well as among studies using meta-analysis. To derive an unambiguous effect size, we advocate that comparisons need to be made on a scale-independent metric, such as Hurlbert's Probability of Interspecific Encounter. Analyses of this metric can be used to disentangle the relative influence of changes in the absolute and relative abundances of individuals, as well as their intraspecific aggregations, in driving differences in biodiversity among communities. This and related approaches are necessary to achieve generality in understanding how biodiversity responds to ecological drivers and will necessitate a change in the way many ecologists collect and analyse their data.

Upstream effects of a reservoir on fish assemblages 45 years following impoundment

Fish assemblage structure, rarefied species richness, species diversity and evenness of assemblages upstream of a reservoir in Oklahoma, U.S.A., were compared pre and post-impoundment as well as in contemporary collections from streams above and below the reservoir. There were significant shifts in assemblage structure between historical and contemporary collections above the reservoir but not between contemporary assemblages above and below the impoundment. Indicator species analysis revealed that the sand shiner Notropis stramineus and fathead minnow Pimephales promelas have declined, whereas largemouth bass Micropterus salmoides and western mosquitofish Gambusia affinis have increased in relative abundance in assemblages upstream of the impoundment. Species richness was lower in contemporary assemblages compared with historical assemblages. Furthermore, contemporary assemblages below the dam had lower species richness, diversity and evenness compared with contemporary collections above the dam. These results highlight the spatial and temporal extent of reservoirs altering fish assemblages upstream of impoundments.

Zooplankton species richness–productivity relationship: Confronting monotonic positive and hump‐shaped models from a local perspective

AbstractThis study examined two models that are most frequently used to describe the relationship between species richness and productivity (SPR): monotonic positive and hump‐shaped models. We assessed zooplankton community diversity in response to algal productivity. The relationship between net primary productivity (NPP) and rarefied species richness was examined by fitting the data to two models and comparing them using the Akaike information criterion (AICc). Macrophyte banks with the highest net primary productivity had the highest zooplankton abundance. Our results pointed to a hump‐shaped model as the best fit to describe the relationship between zooplankton species richness and primary productivity (ΔAICc &gt; 4). Thus, the diversity was lower at the extremes of productivity and higher at intermediate levels of productivity. We suggest that this relationship might occur because when the resource supply rates are low, environmental conditions are stressful, whereas a high availability of resources enhances competitive exclusion. Two observations supported this statement: (i) the total abundance of the community positively correlated with NPP (P &lt; 0.05), indicating that less productive sites had few consumers and the raised productivity tended to favour the total abundance; (ii) NPP was negatively correlated with evenness (P &lt; 0.05), indicating that productivity increased the dominance of certain species in the communities. Therefore, we challenged two of the models most frequently used to explain SPR, and discuss some mechanisms underlying a hump‐shaped SPR.

Delta-associated molluscan life and death assemblages in the northern Adriatic Sea: Implications for paleoecology, regional diversity and conservation

Life–death (LD) studies of shelly macrofauna are important to evaluate how well a fossil assemblage can reflect the original living community, but can also serve as a proxy for recent ecological shifts in marine habitats and in practice this has to be distinguished using taphonomic preservation pattern and estimates of time-averaging. It remains to be rigorously evaluated, however, how to distinguish between sources of LD disagreement. In addition, death assemblages (DAs) also preserve important information on regional diversity which is not available from single censuses of the life assemblages (LAs). The northern Adriatic Sea is an ecosystem under anthropogenic pressure, and we studied the distribution and abundance of living and dead bivalve and gastropod species in the physically stressful environments (tidal flat and shallow sublittoral soft bottoms) associated with the delta of the Isonzo River (Gulf of Trieste). Specifically we evaluated the fidelity of richness, evenness, abundance, habitat discrimination and beta diversity. A total of 10,740 molluscs from fifteen tidal flat and fourteen sublittoral sites were analyzed for species composition and distribution of living and dead molluscs. Of 78 recorded species, only eleven were numerically abundant. There were many more dead than living individuals and rarefied species richness in the DA was higher at all spatial scales, but the differences are lower in habitats and in the region than at individual stations. Evenness was always higher in death assemblages, and probably due to temporally more variable LAs the differences are stronger in the sublittoral habitats. Distinct assemblages characterized intertidal and sublittoral habitats, and the distribution and abundance of empty shells generally corresponded to that of the living species. Death assemblages have lower beta diversity than life assemblages, but empty shells capture compositional differences between habitats to a higher degree than living shells. More samples would be necessary to account for the diversity of living molluscs in the study area, which is, however, well recorded in the death assemblages. There is no indication of a major environmental change over the last decades in this area, but due to the long history of anthropogenic pressure here, such a potential impact might be preserved in historical layers of the deeper sedimentary record.

Palynological composition of a Lower Cretaceous South American tropical sequence: Climatic implications and diversity comparisons with other latitudes

Reconstruction of floristic patterns during the early diversification of angiosperms is impeded by the scarce fossil record, especially in tropical latitudes. Here we collected quantitative palynological data from a stratigraphic sequence in tropical South America to provide floristic and climatic insights into such tropical environments during the Early Cretaceous. We reconstructed the floristic composition of an Aptian-Albian tropical sequence from central Colombia using quantitative palynology (rarefied species richness and abundance) and used it to infer its predominant climatic conditions. Additionally, we compared our results with available quantitative data from three other sequences encompassing 70 floristic assemblages to determine latitudinal diversity patterns. Abundance of humidity indicators was higher than that of aridity indicators (61% vs. 10%). Additionally, we found an angiosperm latitudinal diversity gradient (LDG) for the Aptian, but not for the Albian, and an inverted LDG of the overall diversity for the Albian. Angiosperm species turnover during the Albian, however, was higher in humid tropics. There were humid climates in northwestern South America during the Aptian-Albian interval contrary to the widespread aridity expected for the tropical belt. The Albian inverted overall LDG is produced by a faster increase in per-sample angiosperm and pteridophyte diversity in temperate latitudes. However, humid tropical sequences had higher rates of floristic turnover suggesting a higher degree of morphological variation than in temperate regions.

The role of the electrofishing equipment type and the operator in assessing fish assemblages in a non-wadeable lowland river

The wider the spatial and temporal scales of a fish survey are the higher the chance that the methodology will vary, most probably in the configuration of the sampling equipment or the composition of the crew. It is important to know how these changes affect data quality. The objective of this study was to assess the effect of the differences both in the electrofisher equipment type (low power, battery powered vs. high power, generator supplied units) and in the operators when assessing fish assemblages in a non-wadeable lowland river in Hungary. We found that compared to the superior effect of “natural” spatio-temporal heterogeneity, pure methodological factors accounted for a low or moderate (<15%) part of the variance in fish data. The most commonly measured assemblage level variables, such as rarefied species richness, similarity based assemblage composition (i.e. presence/absence) and relative abundance data were the most insensitive to changing the equipment type and/or the operator. However, the shared effect of methodological and spatio-temporal factors was important in shaping CPUE data and mean fish size of some species, suggesting that the sensitivity of these variables to methodological variations can vary in space and time. We concluded that in systems with high spatio-temporal heterogeneity, the relative importance of the herein investigated methodological bias is likely to remain within an acceptable range. Thence, in studies examining large-scale ecological patterns over wide range of habitats and/or large areas, some flexibility in the methodology may be a reasonable compromise in favor of sampling more sites and increasing effort. Nevertheless, if any change in the methodology is indispensable, at least its effect on sample quality should be assessed.

More species, but all do the same: contrasting effects of flood disturbance on ground beetle functional and species diversity

The role of habitat disturbance on biodiversity is central as it promotes changes in ecological systems. That said, still little is known about the functional consequences of such changes. Functional diversity can be used to revealing more mechanistically the disturbance effects on communities by considering the richness and the distribution of traits among the species. Here we analyzed the response of functional and species diversity of ground beetles to flood disturbance to better understand the functioning of alluvial invertebrate communities.Ground beetles were sampled in periodically flooded grasslands along the Elbe River in Germany. We used generalized linear mixed effects models to unveil the relationships between flood disturbance, species and functional diversity, respectively. We measured different components of functional diversity (functional richness, evenness, dispersion, and divergence) and analyzed species diversity by means of rarefied species richness, abundances, evenness and Simpson's diversity.We found contrasting relationships in that most species diversity measures peaked at highest disturbance levels, while most functional diversity measures decreased with increasing disturbance intensities.Inversed relationships between species and functional diversity are rarely observed, as most studies report on positive correlations. We explain increasing species diversity with a higher amount of resources available in highly disturbed sites. Decreasing functional diversity is best explained through the convergence of species traits by flood disturbance and uneven resource exploitation in highly disturbed plots (low functional evenness), suggesting strong impacts from functionally different generalist species in floodchannels. We show that the amount of resources available, and how these resources are exploited, play major roles in the functioning of floodplain ground beetle communities.

Terrestrial vertebrates alter seedling composition and richness but not diversity in an Australian tropical rain forest

Although birds and mammals play important roles in several mechanisms hypothesized to maintain plant diversity in species-rich habitats, there have been few long-term, community-level tests of their importance. We excluded terrestrial birds and mammals from fourteen 6 x 7.5 m plots in Australian primary tropical rain forest and compared recruitment and survival of tree seedlings annually over the subsequent seven years to that on nearby open plots. We re-censused a subset of the plots after 13 years of vertebrate exclusion to test for longer-term effects. After two years of exclusion, seedling abundance was significantly higher (74%) on exclosure plots and remained so at each subsequent census. Richness was significantly higher on exclosure plots from 1998 to 2003, but in 2009 richness no longer differed, and rarefied species richness was higher in the presence of vertebrates. Shannon's diversity and Pielou's evenness did not differ in any year. Vertebrates marginally increased density-dependent mortality and recruitment limitation, but neither effect was great enough to increase richness or diversity on open plots relative to exclosure plots. Terrestrial vertebrates significantly altered seedling community composition, having particularly strong impacts on members of the Lauraceae. Overall, our results highlight that interactions between terrestrial vertebrates and tropical tree recruitment may not translate into strong community-level effects on diversity, especially over the short-term, despite significant impacts on individual species that result in altered species composition.

Retention of aspen ( Populus tremulae) at final cuttings – The effect of dead wood characteristics on saproxylic beetles

To preserve biodiversity in managed forest landscapes dead and living trees are retained at final cuttings. In the present study we evaluated the effect of these practices for saproxylic (wood-dependent) beetles inhabiting dead aspen trees ( Populus tremulae). For saproxylic beetles, tree retention at final cuttings can be expected to be especially valuable for species adapted to sun-exposed dead wood, a substrate that only rarely occurs in well managed forest stands. Therefore, the current evaluation was conducted as a comparison of species richness, species density (number of species per sample), assemblage composition and occurrence of individual species between clear-cuts, where aspen trees were retained, and closed forest stands with aspen trees. The study was conducted in central Sweden and the beetles were sampled by sieving of bark from CWD (coarse woody debris) of aspen. There was no significant difference in rarefied species richness between forest and clear-cut sites. Species composition differed significantly between the two stand types. Generalized linear mixed-effects models predicted the species density to be 34% lower in CWD objects in forest sites than on clear-cuts. This pattern could partly be explained by differences in CWD diameter, decay class and bark types between the two stand types (clear-cut/forest). Stand type was a significant predictor of occurrence in individual CWD objects for 30% of analysed individual beetle species. For all species except one, the variable stand type predicted higher occurrence on clear-cuts than in forest stands. To conclude, our results demonstrate that retention of aspen on clear-cuts contributes to population recruitment of a different assemblage of species than CWD within stands.

How to choose a biodiversity indicator – Redundancy and complementarity of biodiversity metrics in a freshwater ecosystem

A range of biodiversity metrics are available to assess the ecological integrity of aquatic ecosystems. However, performance varies considerably among different types of metrics and provides different information regarding ecosystem conditions, thus making difficult the selection of appropriate metrics for biomonitoring. The present study evaluated the robustness of six biodiversity metrics to assess environmental change and determine their utility as relevant indicators of ecosystem biodiversity and functionality. Traditional metrics such as species richness and Shannon diversity were considered along with alternative metrics such as functional diversity, size diversity and taxonomic distinctness. To that end, invertebrate assemblages in a river floodplain were used as a case study to evaluate the performance of metrics using Generalized Additive Models (GAM). GAM explained between eight and 49% of the variability in biodiversity. The regression models exhibited differences in the response of biodiversity indicators to environmental factors, suggesting that intermediate levels of turbidity and low salinity are conditions favouring increased biodiversity in the study area. Based on correlations among metrics and responses to primary environmental factors, it is concluded that Shannon and functional diversity, and rarefied species richness generated similar information regarding ecosystem conditions (i.e., the metrics were redundant); while size diversity and distinctness provided useful additional data characterizing ecosystem quality (i.e., the metrics were complementary). Functional diversity indicated not only number and dominance of species, but also each species functional role in the community, and was therefore the most informative biodiversity metric. Nevertheless, the use of a combination of metrics, for example functional and size diversity, and variation in taxonomic distinctness, provides complementary data that will serve to achieve a more thorough understanding of ecosystem structure and function, and response to primary environmental influences.

Butterfly community recovery in degraded rainforest habitats in the Upper Guinean Forest Zone (Kakum forest, Ghana)

Successful regeneration of secondary tropical forest might be crucial in the conservation of rainforests, since large areas of primary forest have been destroyed or degraded. Animal communities might play an important role in restoration of biological diversity in these secondary habitats, since some groups have high mobility and capacity for dispersal. Fruit-feeding butterflies were trapped to measure differences between butterfly communities in primary rainforest and disturbed forest habitats of different stage of regeneration including clear-cut, abandoned farmland, newly planted forest and middle-aged secondary growth. 3465 specimens representing 114 species were identified from 56 traps operated for 36 days. Extremely high values of rarefied species richness were estimated in the clear-cut habitat, due to the high number of singletons and doubletons. This was caused by a gap-effect that allowed penetration of canopy and open area species after disturbance. The differences between butterfly communities were best demonstrated through ecological composition, richness and abundance of indicator groups and habitat similarity based on Jaccard’s similarity index. The results show a clear ability of butterfly communities in degraded forest habitats to regenerate in 50–60 years after clearance.

Does Tropical Forest Fragmentation Increase Long-Term Variability of Butterfly Communities?

Habitat fragmentation is a major driver of biodiversity loss. Yet, the overall effects of fragmentation on biodiversity may be obscured by differences in responses among species. These opposing responses to fragmentation may be manifest in higher variability in species richness and abundance (termed hyperdynamism), and in predictable changes in community composition. We tested whether forest fragmentation causes long-term hyperdynamism in butterfly communities, a taxon that naturally displays large variations in species richness and community composition. Using a dataset from an experimentally fragmented landscape in the central Amazon that spanned 11 years, we evaluated the effect of fragmentation on changes in species richness and community composition through time. Overall, adjusted species richness (adjusted for survey duration) did not differ between fragmented forest and intact forest. However, spatial and temporal variation of adjusted species richness was significantly higher in fragmented forests relative to intact forest. This variation was associated with changes in butterfly community composition, specifically lower proportions of understory shade species and higher proportions of edge species in fragmented forest. Analysis of rarefied species richness, estimated using indices of butterfly abundance, showed no differences between fragmented and intact forest plots in spatial or temporal variation. These results do not contradict the results from adjusted species richness, but rather suggest that higher variability in butterfly adjusted species richness may be explained by changes in butterfly abundance. Combined, these results indicate that butterfly communities in fragmented tropical forests are more variable than in intact forest, and that the natural variability of butterflies was not a buffer against the effects of fragmentation on community dynamics.