Rapid Events Research Articles

Unparallel resilience of shallow-water tropical calcifiers (foraminifera and scleractinian reef corals) during the early Paleogene global warming intervals

Investigating the fossil record to provide evidence about the response of shallow-water tropical calcifiers to past warming events is crucial considering that they are severely threatened by current global warming. We thus focused our attention on scleractinian reef corals (SRC) and shallow-water foraminifera (SWF), both mainly symbiont-bearing organisms, analysing and comparing their diversity patterns during the Paleocene and Eocene from datasets of the Neothetyan circum-Mediterranean region. In particular, at both genus and species level, we analysed changes in diversity, together with origination and extinction rates.Despite some biases related to biostratigraphic resolution of SRC and SWF data, our results show that they reacted differently to the major warming events of the Early Paleogene. The K/Pg mass extinction caused the disappearance of almost all SWF, whereas several corals passed this crisis and persisted up to the end of Paleocene, when the Paleocene-Eocene Thermal Maximum (PETM) caused a relatively small decrease of coral diversity together with a global collapse of coral reefs. On the other hand, a rapid radiation of nummulitids and alveolinids occurred at species level. The impact of the Early Eocene Climatic Optimum (EECO) was apparently more severe for SWF than for SRC. After the Middle Eocene Climatic Optimum (MECO), the general cooling trend led to the fading of Eocene SWF genera and species, whereas SRC began their rapid diversification from Bartonian to Priabonian and culminating in the Chattian.Our results suggest that rapid warming events favoured speciation in SWF, whereas the slow cooling trend (e.g., after the MECO) favoured diversification of SRC. Our data also underline that SWF reacted differently to warming events as compared to deep-sea smaller benthic foraminifera and that the same events in the planktonic realm are not strictly coeval with those occurring in shallow-water environments.On a wider perspective, we observe that shallow-water calcifiers demonstrate a good degree of resilience to global temperature increases, even if undergoing to more or less marked reduction of biodiversity. We provide evidences for the recovery of past ecosystems from both short and long stressors.

Anthropic cut marks in extinct megafauna bones from the Pampean region (Argentina) at the last glacial maximum.

The initial peopling of South America is a topic of intense archaeological debate. Among the most contentious issues remain the nature of the human-megafauna interaction and the possible role of humans, along with climatic change, in the extinction of several megamammal genera at the end of the Pleistocene. In this study, we present the analysis of fossil remains with cutmarks belonging to a specimen of Neosclerocalyptus (Xenarthra, Glyptodontidae), found on the banks of the Reconquista River, northeast of the Pampean region (Argentina), whose AMS 14C dating corresponds to the Last Glacial Maximum (21,090-20,811 cal YBP). Paleoenvironmental reconstructions, stratigraphic descriptions, absolute chronological dating of bone materials, and deposits suggest a relatively rapid burial event of the bone assemblage in a semi-dry climate during a wet season. Quantitative and qualitative analyses of the cut marks, reconstruction of butchering sequences, and assessments of the possible agents involved in the observed bone surface modifications indicate anthropic activities. Our results provide new elements for discussing the earliest peopling of southern South America and specifically for the interaction between humans and local megafauna in the Pampean region during the Last Glacial Maximum.

A light-efficient and versatile multiplexing method for snapshot spectral imaging

The study of rapid and stochastic events that involve multiple species, such as chemical reactions and plasma dynamics, requires means to capture multispectral information in two dimensions at both high temporal- and spatial resolution. Commercially available cameras that provide high temporal resolution are based on either signal intensification or rapid data acquisition. Intensified cameras provide extremely short acquisition times using intensification by means of micro channel plates, but the conversion between electrons and photons makes these cameras inherently monochrome. In contrast, high-speed cameras can achieve color-sensitivity through integrated Bayer filters but suffer from a reduced light collection efficiency and a fixed spectral composition. In this article we present a non-integrated optical arrangement for instantaneous multispectral imaging based on FRAME image multiplexing. By spectrally separating the signal using lossless dichroic mirrors, a 16-fold increase in light-collection efficiency is gained (compared to past solutions), resulting in an equivalent increase in temporal resolution. This improvement provides new avenues for multispectral imaging of rapid events. We demonstrate the system’s versatility and suitability for studies of such processes by applying it for (i) temperature mapping using a high-resolution CCD camera, (ii) high-speed videography up to 10 kHz at four spectral channels and (iii) dual-species visualization in a plasma discharge using an intensified sCMOS camera.

Viromes of Antarctic fish resemble the diversity found at lower latitudes.

Antarctica harbours some of the most isolated and extreme environments on Earth, concealing a largely unexplored and unique component of the global animal virosphere. To understand the diversity and evolutionary histories of viruses in these polar species, we determined the viromes of gill metatranscriptomes from 11 Antarctic fish species with 248 samples collected from the Ross Sea region spanning the Perciformes, Gadiformes, and Scorpaeniformes orders. The continent's shift southward and cooling temperatures >20 million years ago led to a reduction in biodiversity and subsequent radiation of some marine fauna, such as the notothenioid fishes. Despite decreased host species richness in polar regions, we revealed a surprisingly complex virome diversity in Ross Sea fish, with the types and numbers of viruses per host species and individuals sampled comparable to that of fish in warmer marine environments with higher host community diversity. We also observed a higher number of closely related viruses likely representing instances of recent and historic host-switching events among the Perciformes (all notothenioids) than in the Gadiformes, suggesting that rapid speciation events within this order generated closely related host species with few genetic barriers to cross-species transmission. Additionally, we identified novel genomic variation in an arenavirus with a split nucleoprotein sequence containing a stable helical structure, indicating potential adaptation of viral proteins to extreme temperatures. These findings enhance our understanding of virus evolution and virus-host interactions in response to environmental shifts, especially in less diverse ecosystems that are more vulnerable to the impacts of anthropogenic and climate changes.

Sustained increases in atmospheric oxygen and marine productivity in the Neoproterozoic and Palaeozoic eras

A geologically rapid Neoproterozoic oxygenation event is commonly linked to the appearance of marine animal groups in the fossil record. However, there is still debate about what evidence from the sedimentary geochemical record—if any—provides strong support for a persistent shift in surface oxygen immediately preceding the rise of animals. We present statistical learning analyses of a large dataset of geochemical data and associated geological context from the Neoproterozoic and Palaeozoic sedimentary record and then use Earth system modelling to link trends in redox-sensitive trace metal and organic carbon concentrations to the oxygenation of Earth’s oceans and atmosphere. We do not find evidence for the wholesale oxygenation of Earth’s oceans in the late Neoproterozoic era. We do, however, reconstruct a moderate long-term increase in atmospheric oxygen and marine productivity. These changes to the Earth system would have increased dissolved oxygen and food supply in shallow-water habitats during the broad interval of geologic time in which the major animal groups first radiated. This approach provides some of the most direct evidence for potential physiological drivers of the Cambrian radiation, while highlighting the importance of later Palaeozoic oxygenation in the evolution of the modern Earth system.

Isopycnal Shoaling Causes Interannual Variability in Oxygen on Isopycnals in the Subarctic Northeast Pacific

AbstractOver 60 years of oceanographic observations from Ocean Station Papa (OSP) in the northeast Pacific indicate faster dissolved oxygen loss than the global average. The greatest negative trends in oxygen concentration occur on isopycnals in the upper water column (σθ = 26.1–26.8 kg m−3, ∼110–200 m) but have considerable uncertainty due to natural variability. In this paper, we use eight Argo profiling floats equipped with optode oxygen sensors to assess the 2008–2016 interannual variability of subsurface dissolved oxygen near OSP. We developed a method using high frequency Conductivity‐Temperature‐Depth data to correct optode profiles for slow response times and used reference profiles from the OSP time series to calibrate the optodes. Response time correction markedly improves subsurface bias caused by slow optode equilibration. Our analysis indicates that episodic shoaling of isopycnals can cause rapid reduction in dissolved oxygen concentration. Changes in ventilation, horizontal mixing, and water mass age are unlikely drivers for the rapid O2 loss events examined. We link dissolved oxygen loss during shoaling events to organic matter export, due to higher concentrations of organic matter and greater respiration rates at shallower depths. Reduced net community production during the “Blob” marine heatwave may have reduced the impact of the second shoaling event examined. Natural variations in dissolved oxygen in these layers provide context for uncertainty estimates of long‐term trends and insight toward the potential for future extreme oxygen minima from the combined impact of the long‐term decline and episodic shoaling.

Thermal tolerance of larval Antarctic cryonotothenioid fishes

Cryonotothenioids constitute a subgroup of notothenioid fishes endemic to the Southern Ocean that are specialized to exist in a narrow range of near-freezing temperatures. Due to the challenges of reliably collecting and maintaining larval cryonotothenioids in good condition, most thermal tolerance studies have been limited to adult and juvenile stages. With increasing environmental pressures from climate change in Antarctic ecosystems, it is important to better understand the impacts of a warming environment on larval stages as well. In this study, we determine the critical thermal maxima (CTmax) of cryonotothenioid larvae collected in pelagic net tows during three research cruises near the western Antarctic Peninsula. We sampled larvae of seven species representing three cryonotothenioid families—Nototheniidae, Channichthyidae, and Artedidraconidae. For channichthyid and nototheniid species, CTmax values ranged from 8.6 to 14.9 °C and were positively correlated with body length, suggesting that younger, less motile larvae may be especially susceptible to rapid warming events such as marine heatwaves. To our knowledge, this is the first published test of acute thermal tolerance for any artedidraconid, with CTmax ranging from 13.2 to 17.8 °C, which did not correlate with body length. Of the two artedidraconid species we collected, Neodraco skottsbergi showed remarkable tolerance to warming and was the only species to resume normal swimming following trials. We offer two hypotheses as to why N. skottsbergi has such an elevated thermal tolerance: (1) their unique green coloration serves as camouflage within near-surface phytoplankton blooms, suggesting they occupy an especially warm near-surface niche, and (2) recent insights into their evolutionary history suggest that they are derived from taxa that may have occupied warm tide-pool habitats. Collectively, these results establish N. skottsbergi and larval channichthyids as groups of interest for future physiological studies to gain further insights into the vulnerability of cryonotothenioids to a warming ocean.

Rapid Relativistic Electron Enhancements During Van Allen Probes Era

AbstractRelativistic electron fluxes in the outer radiation belt exhibit significant variability during geomagnetic storms and substorms. This study investigates rapid relativistic electron enhancements (REE) in the outer radiation belt throughout the entire Van Allen Probes (RBSP) era from October 2012 to October 2019. Utilizing RBSP measurements, we identify 182 rapid REE events characterized by a factor of greater than two increase in relativistic electron fluxes within a half RBSP orbit (approximately 4.5 hr) at L = 4.5–5.5. Approximately 76% of rapid REE events occur during geomagnetic storms. Rapid REEs during storms are concentrated within the 12‐hr period preceding and the 24‐hr period following the end of the storm's main phase. Intense REE are more likely found in storm's main phase compared to moderate REE. Sub‐relativistic and relativistic electron injections are commonly observed during rapid REE. Substorm activities (AL/AE, MPB index) and convection (AU index) are more intense before and during REE, in contrast to the intervals following REEs. The intensity of rapid REE correlates with the strength of substorms and convection. This comprehensive survey suggests that rapid REEs in the outer radiation belt are likely associated with, but not strictly tied to, geomagnetic storms. Enhanced convection and substorm appear to create favorable conditions for rapid REE. These substorms and enhanced convection are likely linked to favorable solar wind conditions for REEs, as documented in previous studies.

Ohio River basin snow ablation and the role of rain‐on‐snow

AbstractSnow cover ablation within the Ohio River Basin (ORB) plays an important role in regional hydroclimatology, while also representing a potential hazard during large and rapid events. Rain‐on‐snow ablation is a particular challenge, where runoff rates are typically enhanced due to the dual inputs of snowmelt and liquid precipitation. Here, we present a 40‐year climatology of snow ablation events frequency, intensity, and timing for the ORB using a 4‐km gridded snow‐water‐equivalent dataset, focusing on the relative proportion of events caused by rain‐on‐snow and changes over time. Spatial patterns of snow ablation frequency and intensity mirror that of seasonal snowfall totals, with higher (lower) values in the northern and eastern (southern) portions of the basin. Rain‐on‐snow events represent approximately 40% of all ablation events within the basin and result in approximately 24%–25% more snow‐water‐equivalent loss than non‐rain‐on‐snow events, plus an additional 3–12 mm of liquid precipitation per event on average. Peak frequency of ablation and rain‐on‐snow events occurs in late winter and early spring, similar to that of the surrounding region. Over time, the frequency of ablation and rain‐on‐snow events has decreased in the northern and eastern portions of the basin, in some cases by as much as 30%. Trends in event magnitudes were more isolated but decreased across portions of central IN, northern KY, eastern OH and northern WV. Additionally, the magnitude of precipitation during rain‐on‐snow events has increased across the region, extending from northern KY into western PA by over 100% in many cases. Broadly, we find tendencies towards fewer events with less snow loss but more liquid precipitation that suggest complicated impacts to the hydroclimatology warranting further investigation.

Extra-nuclear and cytoplasmic steroid receptor signalling in hormone dependent cancers

Steroid hormone receptors are key mediators in the execution of hormone action through a combination of genomic and non-genomic action. Since their isolation and characterisation in the early 20th Century much of our understanding of the biological actions of steroid hormones are underpinned by their activated receptor activity. Over the past two decades there has been an acceleration of more omics-based research which has resulted in a major uptick in our comprehension of genomic steroid action. However, it is well understood that steroid hormones can induce very rapid signalling events in tandem with their genomic actions wherein they exert their influence through alterations in gene expression. Thus the totality of genomic and non-genomic steroid action occurs in a simultaneous and reciprocal manner and a greater appreciation of whole cell action is required to fully evaluate steroid hormone activity in vivo. In this mini-review we outline the most recent developments in non-genomic steroid action and cytoplasmic steroid hormone receptor biology in endocrine-related cancers with a focus on the 3-keto steroid receptors, in particular the androgen receptor.

Characterization of the small Arabidopsis thaliana GTPase and ADP-ribosylation factor-like 2 protein TITAN 5.

Small GTPases function by conformational switching ability between GDP- and GTP-bound states in rapid cell signaling events. The ADP-ribosylation factor (ARF) family is involved in vesicle trafficking. Though evolutionarily well conserved, little is known about ARF and ARF-like GTPases in plants. Here, we characterized biochemical properties and cellular localization of the essential small ARF-like GTPase TITAN 5/HALLIMASCH/ARL2/ARLC1 (hereafter termed TTN5) from Arabidopsis thaliana. Two TTN5 variants were included in the study with point mutations at conserved residues, suspected to be functional for nucleotide exchange and GTP hydrolysis, TTN5T30N and TTN5Q70L. We found that TTN5 had a very rapid intrinsic nucleotide exchange capacity with a conserved nucleotide switching mechanism. TTN5 acted as a non-classical small GTPase with a remarkably low GTP hydrolysis activity, suggesting it is likely present in GTP-loaded active form in the cell. We analyzed signals from yellow fluorescent protein (YFP)-tagged TTN5 and from in situ immunolocalization of hemagglutine-tagged HA3-TTN5 in Arabidopsis seedlings and in a transient expression system. Together with colocalization using endomembrane markers and pharmacological treatments the microscopic analysis suggests that TTN5 can be present at the plasma membrane and dynamically associated with membranes of vesicles, Golgi stacks and multivesicular bodies. While the TTN5Q70L variant showed similar GTPase activities and localization behavior as wild-type TTN5, the TTN5T30N mutant differed in some aspects. Hence, the unusual capacity of rapid nucleotide exchange activity of TTN5 is linked with cell membrane dynamics, likely associated with vesicle transport pathways in the endomembrane system.

Rapid vertebrate speciation via isolation, bottlenecks, and drift

Speciation is often driven by selective processes like those associated with viability, mate choice, or local adaptation, and "speciation genes" have been identified in many eukaryotic lineages. In contrast, neutral processes are rarely considered as the primary drivers of speciation, especially over short evolutionary timeframes. Here, we describe a rapid vertebrate speciation event driven primarily by genetic drift. The White Sands pupfish (Cyprinodon tularosa) is endemic to New Mexico's Tularosa Basin where the species is currently managed as two Evolutionarily significant units (ESUs) and is of international conservation concern (Endangered). Whole-genome resequencing data from each ESU showed remarkably high and uniform levels of differentiation across the entire genome (global FST ≈ 0.40). Despite inhabiting ecologically dissimilar springs and streams, our whole-genome analysis revealed no discrete islands of divergence indicative of strong selection, even when we focused on an array of candidate genes. Demographic modeling of the joint allele frequency spectrum indicates the two ESUs split only ~4 to 5 kya and that both ESUs have undergone major bottlenecks within the last 2.5 millennia. Our results indicate the genome-wide disparities between the two ESUs are not driven by divergent selection but by neutral drift due to small population sizes, geographic isolation, and repeated bottlenecks. While rapid speciation is often driven by natural or sexual selection, here we show that isolation and drift have led to speciation within a few thousand generations. We discuss these evolutionary insights in light of the conservation management challenges they pose.

Effect of Human Head Shape on the Risk of Traumatic Brain Injury: A Gaussian Process Regression-Based Machine Learning Approach.

Computational head injury models are promising tools for understanding and predicting traumatic brain injuries. However, most available head injury models are "average" models that employ a single set of head geometry (e.g., 50th-percentile U.S. male) without considering variability in these parameters across the human population. A significant variability of head shapes exists in U.S. Army soldiers, evident from the Anthropometric Survey of U.S. Army Personnel (ANSUR II). The objective of this study is to elucidate the effects of head shape on the predicted risk of traumatic brain injury from computational head injury models. Magnetic resonance imaging scans of 25 human subjects are collected. These images are registered to the standard MNI152 brain atlas, and the resulting transformation matrix components (called head shape parameters) are used to quantify head shapes of the subjects. A generative machine learning model is used to generate 25 additional head shape parameter datasets to augment our database. Head injury models are developed for these head shapes, and a rapid injurious head rotation event is simulated to obtain several brain injury predictor variables (BIPVs): Peak cumulative maximum principal strain (CMPS), average CMPS, and the volume fraction of brain exceeding an injurious CMPS threshold. A Gaussian process regression model is trained between head shape parameters and BIPVs, which is then used to study the relative sensitivity of the various BIPVs on individual head shape parameters. We distinguish head shape parameters into 2 types: Scaling components ${T_{xx}}$, ${T_{yy}}$, and ${T_{zz}}$ that capture the breadth, length, and height of the head, respectively, and shearing components (${T_{xy}},{T_{xz}},{T_{yx}},{T_{yz}},{T_{zx}}$, and ${T_{zy}}$) that capture the relative skewness of the head shape. An overall positive correlation is evident between scaling components and BIPVs. Notably, a very high, positive correlation is seen between the BIPVs and the head volume. As an example, a 57% increase in peak CMPS was noted between the smallest and the largest investigated head volume parameters. The variation in shearing components ${T_{xy}},{T_{xz}},{T_{yx}},{T_{yz}},{T_{zx}}$, and ${T_{zy}}$ on average does not cause notable changes in the BIPVs. From the Gaussian process regression model, all 3 BIPVs showed an increasing trend with each of the 3 scaling components, but the BIPVs are found to be most sensitive to the height dimension of the head. From the Sobol sensitivity analysis, the ${T_{zz}}$ scaling parameter contributes nearly 60% to the total variance in peak and average CMPS; ${T_{yy}}$ contributes approximately 20%, whereas ${T_{xx}}$ contributes less than 5%. The remaining contribution is from the 6 shearing components. Unlike peak and average CMPS, the VF-CMPS BIPV is associated with relatively evenly distributed Sobol indices across the 3 scaling parameters. Furthermore, the contribution of shearing components on the total variance in this case is negligible. Head shape has a considerable influence on the injury predictions of computational head injury models. Available "average" head injury models based on a 50th-percentile U.S. male are likely associated with considerable uncertainty. In general, larger head sizes correspond to greater BIPV magnitudes, which point to potentially a greater injury risk under rapid neck rotation for people with larger heads.

Climate Change and Child Marriage: Evidence from Bangladesh

This paper examines the effects of environmental vulnerability on the risk of child marriage in Bangladesh. Community vulnerability measures are constructed for 240 rural communities in eight districts according to the presence of three indicators of environmental vulnerability—history of cyclones, flooding, and waterlogging. Community data are linked to individual-level adolescent survey data from a representative sample of 15,000 adolescent girls in those communities. Types of environmental vulnerability and the effect on adolescent girls’ marriage outcomes have been explored using discrete time survival analysis. Results show that coastal communities with prolonged waterlogging and salinity have significantly higher child marriage rates, and there is no evidence of higher risks of child marriage in flood-affected areas. The paper concludes that slow and rapid onset events vary in their impact on child marriage. It is important to distinguish between rapid onset factors, such as floods and cyclones, and slow and less dramatically visible factors, such as waterlogging, that affect marriage through longer-term impacts on lives and livelihoods. Programs need to cast a wider net to safeguard girls living in the communities not only where immediate and sudden environmental emergencies have occurred but also in the areas where climate-induced disasters may not seem very visible but have slow, cascading effects and pose a risk for child marriage.

Operando Decoding of Surface Chemical and Thermal Events in Photoelectrocatalysis via a Lab-Around-Microfiber Sensor.

Operando decoding of the key parameters of photo-electric catalysis provides reliable information for catalytic effect evaluation and catalytic mechanism exploration. However, to capture the details of surface-localized and rapid chemical and thermal events at the nanoscale in real-time is highly challenging. A promising approach based on a lab-around-microfiber sensor capable of simulating photo-electric catalytic reactions on the surface of optical fibers as well as monitoring reactant concentration changes and catalytic heat generation processes is demonstrated. Due to the penetration depth of submicron size and the fast response ability of the evanescent field, the lab-around-microfiber sensor overcame the difficulty of reading instantaneous surface parameters in the submicron range. This sensor operando dismantled the changes in reactant concentration and temperature on the catalyst surface induced by light and voltage, respectively. It also decoded the impact of catalyst composition on the adsorption efficiency and catalytic efficiency across various wavelengths and determined the synchronized occurrence of pollutant degradation and catalytic thermal effects. Stable correlations between the real-time parameters and catalytic activities are obtained, helping to provide a basic understanding of the catalytic process and mechanism. This approach fills an important gap in the current monitoring methods of catalytic processes and heat production.

Paleoenvironment reconstruction of the eastern Tethys during the pre-onset excursion preceding the PETM

A rapid warming event known as the pre-onset excursion (POE) occurred prior to the Paleocene-Eocene Thermal Maximum (PETM). It is less well studied compared to the PETM due to the limited number of well-resolved records globally despite its importance in shaping the subsequent PETM. Shallow marine environments, particularly in low latitudes, are insufficiently documented despite their significant influence on heat and moisture distribution. Here we report high temporal resolution geochemical and magnetic susceptibility records from a well-preserved shallow marine Kuzigongsu section in the Tarim Basin in China to reconstruct the paleoenvironment of the eastern Tethys during the POE. Changes in chemical weathering proxies (e.g., chemical index of alteration [CIA] and Rb/Sr) suggest chemical weathering intensification occurred after the POE. Higher enrichment factors of P, Ba, Ni, and Cu support increased primary productivity due to enhanced river runoff and nutrient input, which aligns with the observed rise in magnetic susceptibility. Concurrently, the eastern Tethys experienced bottom water deoxygenation, which is supported by redox-sensitive proxies (e.g., elevated enrichment factors of U and V, and low Mn* values). Increased δ15Norg values provide additional evidence of enhanced reduction processes due to increased productivity, attributed to enhanced denitrification and 15N enrichment in seawater's NO3− reservoir. The carbon isotope excursion during the POE recovers significantly faster than that during the PETM yet coincides with lingering environmental impacts that are also globally reported for the PETM. These paleoenvironmental proxies reflect notable changes in chemical weathering, ocean productivity, and redox conditions of the eastern Tethys region, potentially setting the stage for the anomalously impactful PETM.

ER stress in mouse serotonin neurons triggers a depressive phenotype alleviated by ketamine targeting eIF2α signaling

Depression is a devastating mood disorder that causes significant disability worldwide. Current knowledge of its pathophysiology remains modest and clear biological markers are lacking. Emerging evidence from human and animal models reveals persistent alterations in endoplasmic reticulum (ER) homeostasis, suggesting that ER stress-related signaling pathways may be targets for prevention and treatment. However, the neurobiological basis linking the pathways involved in depression-related ER stress remains unknown. Here, we report that an induced model of ER stress in mouse serotonin (5-HT) neurons is associated with reduced Egr1-dependent 5-HT cellular activity and 5-HT neurotransmission, resulting in neuroplasticity deficits in forebrain regions and a depressive-like phenotype. Ketamine administration engages downstream eIF2α signaling to trigger rapid neuroplasticity events that rescue the depressive-like effects. Collectively, these data identify ER stress in 5-HT neurons as a cellular pathway involved in the pathophysiology of depression and show that eIF2α is critical in eliciting ketamine's fast antidepressant effects.

Calibrating Holocene human–environment interactions using ancient narratives: The example of Ngurunderi in South Australia

The essence of stories of human–environment interactions can be preserved in oral contexts for millennia, creating novel opportunities for humanizing the past. This study examines stories (knowledge-rich narratives) about the ancestral being Ngurunderi, told by Ngarrindjeri peoples of South Australia. Three elements of the Ngurunderi narrative are considered. The first recalls his journey along a 170-km long coastal barrier (Younghusband Peninsula) when this was continuous. The second discusses Ngurunderi’s encounters with what are now islands off the Fleurieu Peninsula, some of which he created, interpreted as memories of when sea level was lower and “islands” were contiguous with the mainland. The third refers to the crossing of a land connection between modern Kangaroo Island and the Fleurieu Peninsula, later submerged to form Backstairs Passage. Using paleogeographic data, the most recent times at which each narrative element could have taken place and observed by people are estimated. This research suggests that: (1) stories about Younghusband Peninsula may be >6700 years cal BP; (2) islands off the Fleurieu Peninsula were created 6800–10,400 cal BP; and (3) submergence of Backstairs Passage occurred 11,000–10,100 cal BP. Narratives are linked to the period of early Holocene sea-level rise, the rapid 8200-cal BP sea-level rise event, and stabilization of sea level 7000–6000 cal BP. These narratives humanize the past and provide information that can be interpreted as both observed coastal and seascape changes as well as past human responses to rising sea level that can inform our future encounters with coastal-landscape change.

Region-Specific Genetic Diversity of Black Rats (Rattus rattus Complex) in Southeast and East Asia Shaped by Rapid Population Expansion Events.

Among the six mitochondrial DNA lineages of the black rat (Rattus rattus Complex; RrC), lineages II and IV are widespread in Southeast and East Asia. This study explored their demographic history using 17 new sequences from the Miyako Islands in the Ryukyu archipelago, together with 178 publicly available cytochrome b sequences. We defined six and two haplotype groups showing rapid population expansion signals in Lineages II and IV, respectively. The six haplotype groups of Lineage II were represented by haplotypes from 1) Myanmar/Bangladesh/Northeast India, 2) Laos, 3) Thailand, 4) Indonesia/Philippines, 5) Vietnam/southern China, and 6) the Ryukyu archipelago. These expansion times were estimated using time-dependent evolutionary rates to be 115,300 years ago (ya), 128,500 ya, 9600 ya, 10,600 ya, 7200 ya, and 1400 ya, respectively, although all had large confidence intervals. The two groups of Lineage IV were recovered from the mainland and islands of Southeast Asia with predicted expansion times of 197,000 ya and 5800 ya, respectively. These results suggest that climatic fluctuations during the last 200,000 years of the Quaternary, affected the population dynamics in subtropical areas at different times. Furthermore, the results of the younger rapid expansion events of RrC suggest the possibility of agricultural advancement and dispersal of Neolithic farmers to different areas within the mainland and islands of Southeast Asia during the Holocene. A subset of rats from the Miyako Islands were found to have the same lineage IV haplotypes as those in Southeast Asia, suggesting a recent introduction of these new lineages.

Range-Wide Phylogeography and Ecological Niche Modeling Provide Insights into the Evolutionary History of the Mongolian Racerunner (Eremias argus) in Northeast Asia.

The Mongolian racerunner, Eremias argus, is a small lizard endemic to Northeast Asia that can serve as an excellent model for investigating how geography and past climate change have jointly influenced the evolution of biodiversity in this region. To elucidate the processes underlying its diversification and demography, we reconstructed the range-wide phylogeographic pattern and evolutionary trajectory, using phylogenetic, population genetic, landscape genetic, Bayesian phylogeographic reconstruction and ecological niche modeling approaches. Phylogenetic analyses of the mtDNA cyt b gene revealed eight lineages that were unbounded by geographic region. The genetic structure of E. argus was mainly determined by geographic distance. Divergence dating indicated that E. argus and E. brenchleyi diverged during the Mid-Pliocene Warm Period. E. argus was estimated to have coalesced at~0.4351 Ma (Marine Isotope Stage 19). Bayesian phylogeographic diffusion analysis revealed out-of-Inner Mongolia and rapid colonization events from the end of the Last Interglacial to the Last Glacial Maximum, which is consistent with the expanded suitable range of the Last Glacial Maximum. Pre-Last Glacial Maximum growth of population is presented for most lineages of E. argus. The Glacial Maximum contraction model and the previous multiple glacial refugia hypotheses are rejected. This may be due to an increase in the amount of climatically favorable habitats in Northeast Asia. Furthermore, E. argus barbouri most likely represents an invalid taxon. The present study is the first to report a range-wide phylogeography of reptiles over such a large region in Northeast Asia. Our results make a significant contribution towards understanding the biogeography of the entire Northeast Asia.