The main radio equipment used by aviation specialists are communication, radar and radio navigation systems. Training of students in these areas is a complex task that requires significant efforts of lecturer. The article proposes a concept of simulator designing that are supposed to be adopted in the educational process of civil aviation institutions based on hybrid approach to the virtual simulators designing. Such concept was applied in the development of methodology for designing of simulators for flight electronic support, which involves solving the problem of selective structural synthesis. The problem of selective structural synthesis of design solutions is described using a morphological tree and implies finding the graph edge that ensures meeting a set of rules with the constraints specified in the process of specification drawing up, which is replenished by the developer-user. Due to random nature, the structural optimization method implies a sequential search for possible options. A computer-aided system of simulator designing for flight electronic support systems was developed based on the methodology. The development of a computer-aided system of simulator designing for radio communications, radar and navigation equipment makes it possible to provide effective training of future pilots and air traffic control officers.