Quaternary Climate Change Research Articles

Comparative phylogeography shows congruent co‐divergence in Neotropical seasonally dry forest and savanna tree species

AbstractAimThe response of South American seasonally dry tropical forest (SDTF) and savanna species to the Quaternary climate changes is still poorly understood. Here we use multi‐model inference approach to compare the phylogeography and demographic history of five trumpet tree species (also known as pau‐d'arco) and draw general biogeographical patterns: Handroanthus impetiginosus, H. ochraceus, H. serratifolius, Tabebuia aurea and T. roseoalba.LocationAmazonia, Atlantic Forest, Cerrado and Caatinga ecoregions, South America and Brazil.TaxaBignoniaceae, Tabebuia Alliance, trees.MethodsWe compiled genetic data, occurrence records and ecological niche modelling (ENM) from published articles. We used coalescent modelling to test patterns of co‐divergence, and analysed niche breadth and overlap and spatial patterns in genetic diversity using quantile regressions.ResultsSpecies showed concordant lineage divergence times in the Pleistocene. Lineage diversification and phylogeographical patterns are more related to species niche breadth than to biome (savanna or SDTF). Differences in genetic diversity among species matches the expected for the demographic scenarios obtained with coalescent simulations and ENMs: species with wider range expansion during the Last Glacial Maximum had higher diversity than species with range retraction or multiple refugia.Main ConclusionsDiversification burst in the Pliocene, and major diversification of lineages during the Pleistocene seems to be a general pattern in SDTF and savannas in the South America. The high number of haplotypes at the Central Brazil, corresponding to the Cerrado ecoregion, highlights the importance of Protected Areas for SDTFs and savannas, highly threatened biomes in Brazil.

Ice age land bridges to continental islands: Repeated migration of the forest‐dwelling sable in northeastern Asia

AbstractAimThe continental island system comprising Sakhalin, Hokkaido and the southern Kuril Islands (SHSK) in northeastern Asia serves as one of the southernmost habitats for many boreal and arctic organisms, with colonization via land bridges formed during glacial periods. To understand the impacts of past land‐bridge formation under Quaternary climate changes across SHSK, we investigated the demographic history of forest‐dwelling marten species.LocationSakhalin, Hokkaido and the southern Kuril Islands in northeastern Asia.TaxonSable, Martes zibellina (Carnivora, Mustelidae).MethodsWe employed multiplexed inter‐simple sequence repeat genotyping by sequencing (MIG‐seq) to obtain genome‐wide single nucleotide polymorphisms (SNPs). We tested possible scenarios of colonization and diversification for SHSK sables using several population genetics approaches including clustering analysis, population tree estimation and approximate Bayesian computation modelling. We also examined haplotype diversity for the mitochondrial ND2 gene.ResultsThe genetic diversity of the island populations and their affinity for continental populations were found to be higher in the order Sakhalin > Hokkaido > Iturup in both nuclear SNP and mitochondrial DNA analyses. Demographic analyses indicated that the sable migrated repeatedly from the continent, particularly to the neighbouring Sakhalin Island. However, only an earlier colonized lineage has persisted on marginal Iturup Island since the Middle Pleistocene. The stronger effects of repeated migrations and/or isolation influenced by the distance to the continent have shaped the contemporary genetic diversity and differentiation of sable populations in SHSK.Main ConclusionsGenome‐wide and comprehensive sampling approaches demonstrated that the forest‐dwelling sable had long‐term persistence with partial admixture of multiple lineages in SHSK, suggesting the existence of forest corridors and refugia on the islands during the last several glacial periods. The SHSK system of continental islands is valuable for understanding the impacts of Quaternary climate changes on the genetic diversity and evolutionary histories of boreal organisms.

Impact of late Quaternary climate change on the demographic history of Japanese field voles and hares revealed by mitochondrial cytochrome b sequences.

The mitochondrial cytochrome b gene of the Japanese field vole (Microtus montebelli), an herbivorous rodent, was subjected to an analysis of sequence variation with the objective of elucidating the population histories of this species. Construction of a phylogenetic tree revealed the existence of several region-specific lineages in Honshu and Kyushu, which were evenly separated from each other. In consideration of the documented time-dependent evolutionary rates of rodents, the estimated divergence times indicate that the region-specific lineages of M. montebelli emerged 160,000-300,000 years ago. In a haplotype network, the region-specific lineages from northern and central Honshu tended to show star-shaped clusters, with additional internal star-shaped clusters, indicative of two periods of population expansion. The onsets of the expansions were estimated to have occurred 15,000 and 10,000 years ago, respectively, suggestive of association with the two periods of rapid warming following the Last Glacial Maximum (LGM). In contrast, such predicted post-LGM expansion events were less pronounced in the southern lineages, implying latitudinal dependence of the effect of the LGM on population dynamics. Sado Island haplotypes exhibited a network with a star-shaped pattern and a 10,000-year-old expansion signal, surrounded by a Honshu haplotype cluster with a 15,000-year-old expansion signal, suggesting contribution of the post-LGM expansion events in the formation of the Sado population. A reanalysis of Cytb sequence of the Japanese hare (Lepus brachyurus), which has a similar geographic range to the voles, yielded results that were consistent with those of the vole analysis, confirming that the characteristics of the post-LGM expansion event were dependent on latitude, involved two successive expansion events, and enabled migration across deep straits. It seems reasonable to infer that the environmental changes that occurred during the warm periods following the LGM were a contributing factor in the expansion of the distribution range of newly emerged haplotype groups.

Influence of climate factors on the global dynamic distribution of Tsuga (Pinaceae)

Throughout the Quaternary period, climate change has significantly influenced plant distribution, particularly affecting species within the genus Tsuga (Endl.) Carrière. This climatic impact ultimately led to the extinction of all Tsuga species in Europe. Today, there are ten recognized species of Tsuga worldwide, one of listed as a vulnerable species and four as near-threatened species. The genus Tsuga exhibits a disjunctive distribution in East Asia (EA), eastern North America (ENA), and western North America (WNA). It is crucial to comprehend the mechanisms underlying these distributional changes and to identify key climate variables to develop effective conservation strategies for Tsuga under future climate scenarios. In this study, we applied the maximum entropy (MaxEnt) model by combining distribution data for Tsuga with abundant pollen fossil data. Our objective was to investigate the climate factors that shape the distribution of Tsuga, identify climate thresholds, and elucidate distribution dynamics in the context of significant climate changes over the past 1070 thousand years (ka). Our findings highlight the pivotal role of precipitation as the key climate factor affecting the distribution of Tsuga. Specifically, in EA, summer precipitation was the key driver, while in North America (NA), winter precipitation exerted greater importance. Moreover, we observed similarities in climatic requirements between Tsuga species in Europe and EA, and declines in summer precipitation and winter temperature were major factors contributing to the extinction of Tsuga species in Europe. Quaternary glacial and interglacial fluctuations exerted substantial impacts on Tsuga distribution dynamics. The disappearance of Tsuga species in the Korean Peninsula may have occurred during the LGM (Last Glacial Maximum). The potential suitable area for Tsuga species in EA expanded during the cold periods, while in NA, it contracted. In the future, climate change may result Tsuga distribution area contraction in both the EA and NA. Our study has identified distinct response patterns of Tsuga in various geographic regions to Quaternary climate change and offers corresponding suggestions for Tsuga conservation. In the future, it will be imperative to prioritize the conservation of natural Tsuga distributions in EA and NA, with a focus on the impacts of precipitation fluctuation on the dynamic distribution of this genus.

Influence of Quaternary climate change on the potential distribution of Atlantic Forest dung beetles (Coleoptera: Scarabaeidae: Scarabaeinae)

Influence of Quaternary climate change on the potential distribution of Atlantic Forest dung beetles (Coleoptera: Scarabaeidae: Scarabaeinae)

Apennine-Pyrenees disjunct distribution: an unusual biogeographic pattern revealed in flea beetles of the Longitarsus candidulus species-group (Coleoptera, Chrysomelidae).

European mountain systems have played a crucial role in shaping the distribution of species and of their genetic diversity during the Quaternary climatic changes, with the establishment of allopatric patterns across main mountain ranges. Here we investigated the evolutionary history of flea beetles of the Longitarsus candidulus species-group showing an uncommon disjunct biogeographic pattern across the Apennine and the Pyrenees. We applied a multilocus molecular approach and multispecies coalescent models to establish a phylogenetic and systematic framework for this morphologically homogeneous species-group and to estimate the time of main cladogenetic events underlying the origin of the Apennine-Pyrenees pattern. We found strong support for the monophyly of the candidulus group with a sister relationship between Longitarsus laureolae and L. leonardii endemic to the Apennine and the Pyrenees mountains respectively. The timing of speciation events in the candidulus species-group coincides with 2 major climatic transitions during the Early and Middle Pleistocene which resulted in significant environmental changes in Europe and suggest a scenario of allopatric isolation and divergence on distinct mountain ranges. The split between the thermophilic species L. candidulus and the ancestor of the temperate species L. laureolae and L. leonardii is estimated at ~3 Ma during the transition from Pliocene to Pleistocene and was probably triggered by their segregation in xerophilous and temperate habitats. The speciation between L. laureolae and L. leonardii, estimated at ~1 Ma during the Mid-Pleistocene Transition, can be explained by the establishment of unfavorable conditions in West Alps and Central Massif underlying the onset of the Apennine-Pyrenees disjunct pattern. Finally, the strict association between members of the candidulus group and distinct Thymelaeaceae plants suggests further studies to address the hypothesis that speciation in these flea beetles might have been also associated with Pleistocene range changes of their host plants.

Phylogeography of an insect inhabiting ‘Sky Islands’: the relationships among genetic structures and geographical characteristics, geohistorical characteristics, and cyclical climate changes

Abstract When gene flow has been restricted between populations, the genetic structure of such species often reflects geohistory and climate changes. Populations of species inhabiting high-altitude regions, known as ‘Sky Islands’, are isolated and exhibit restricted gene flow, so they often have habitat-specific genetic structures that correspond to their surrounding geographical structures. Here we focus on a limnephilid caddisfly, Rivulophilus sakaii, which inhabits the alpine zone of Japan. Phylogenetic analyses were conducted based on the mtDNA COI and 16S rRNA regions, and the nDNA 18S rRNA, 28S rRNA, CAD, EF1-α, and POL-II regions; the results indicated three phylogeographically differentiated intraspecific lineages. Haplotype network and demographic analyses based on the mtDNA COI region suggested the size of the respective isolated populations has stabilized. This suggests that mountain formation in the Japanese Archipelago due to volcanic activity has resulted in barriers to migration and dispersal between high-altitude aquatic insect populations. This was inferred to be an effect of Quaternary climate changes that caused vertical distributional shifts following mountain formation, resulting in repeated connection and fragmentation of the populations. This is important supporting information with regard to discussing the effects and functions of geohistory and climatic changes on the phylogenetic evolution of organisms presently inhabiting interglacial ‘Sky Islands’.

A fluvial record of late Quaternary climate changes and tectonic uplift along the Marche Piedmont Zone of the Apennines: New insights from the Tesino River (Italy)

Fluvial terraces are a pre-eminent continental record of climate changes and tectonics. Although the use of fill terraces for incision rate derivation is complicated due to their cyclical nature relative to strath terraces, they remain a relatively complete record of incision and deposition, thus allowing one to derive interpretations about both tectonics and climate. The Adriatic piedmont of the Apennines (central Italy) offers a well-preserved staircase of such terraces, caused by the cyclical alternation of fluvial aggradation and incision over the Middle and Late Pleistocene in response to a combination of low-rate tectonic uplift and climate changes. Although the staircase has been already widely described with examples from several valleys of the Adriatic Piedmont, its geochronological constraints are limited and must be enhanced to extract reliable climatic and tectonic signals from terrace deposits—especially for the older terrace levels.This research provides new Optically Stimulated Luminescence (OSL) data on the terrace chronology in combination with new semi-automatically extracted data on the altimetric and along-valley terrace distributions, as well as the sedimentological characteristics of fill terraces within the Tesino River basin in the Marche piedmont zone of the Apennines. The semi-automatic extraction of the terrace tread allowed a preliminary level classification as a function of the terrace height above the modern channel thalweg. The results demonstrate that, within the slowly uplifting Adriatic piedmont of the Apennines, the main phases of fluvial aggradation occurred during cold and full-glacial conditions followed by river incision and floodplain-channel abandonment during warmer periods. This finding confirms previous results from the last fluvial aggradation-incision cycle (Late Pleistocene). The results also show that the same formation mechanism is valid for the older (Middle Pleistocene) terraces. Indeed, this study provides new geochronological constraints for the regional-scale paradigm of cyclical formation and development of Quaternary fill terrace staircases along this sector of the Apennines. The use of a dated fill terrace staircase allowed estimation of a Middle Pleistocene long-term bedrock incision rate ranging from 0.3 to 0.5 mm yr−1 in agreement with previous studies in the central-northern sector of the Adriatic Apennines. The resulting uplift rate supports the presence of differently uplifted blocks due to the fragmentation of the peri-Adriatic region caused by the activity of left-lateral faults.

Spatio‐Temporal Variations in Sediment Delivery as a Response to Rapid Quaternary Climate Change in the Lake Malawi Rift, East Africa

AbstractThe interplay of rapid climate change and tectonics drives landscape development, sediment routing, and deposition in early‐stage continental rift systems. The Lake Malawi Rift, in the Western Branch of the East African Rift, is an archetype of a juvenile rift and an ideal natural laboratory for evaluating lacustrine source‐to‐sink systems on orbital or shorter timescales. We examine the interplay of these processes over the past 140 kyr using observations from nested seismic reflection data sets tied to scientific drill cores, which calibrate numerical forward models of this closed sedimentary system. Fault slip rates measured from seismic data drive tectonic displacements in the model. Satellite‐derived precipitation maps constrain modern precipitation and are scaled to previous hydrologic balance studies to reconstruct past climates. Our model reproduces known sediment thicknesses across the rift and accounts for 96% of the estimated siliciclastic sediment deposited over the past 140 kyr. The results demonstrate that the onset of arid climate conditions (140–95 kyr BP) causes extreme drainage adjustments downstream and the formation of mega‐catchments that flow axially into a shallow restricted paleo‐lake. Sedimentation rates during this time are twice the present values due to increased sediment focusing via these axial systems into a much smaller, hydrologically closed lake. As the climate became wetter (95–50 kyr BP), the lake rapidly expanded, decreasing both erosion and sedimentation rates across the rift. This closed‐loop approach allows us to evaluate the role of high‐frequency climate change in modulating basin physiography as well as sediment fluxes in juvenile rift systems.

Biomarker proxies for reconstructing Quaternary climate and environmental change

ABSTRACTTo reconstruct past environmental changes, a range of indirect or proxy approaches can be applied to Quaternary archives. Here, we review the complementary and novel insights that have been provided by the analysis of chemical fossils (biomarkers). Biomarkers have a biological source that can be highly specific (e.g. produced by a small group of organisms) or more general. We show that biomarkers are able to quantify key climate variables (particularly water and air temperature) and can provide qualitative evidence for changes in hydrology, vegetation, human–environment interactions and biogeochemical cycling. In many settings, biomarker proxies provide the opportunity to simultaneously reconstruct multiple climate or environmental variables, alongside complementary and long‐established approaches to palaeoenvironmental reconstruction. Multi‐proxy studies have provided rich sets of data to explore both the drivers and impacts of palaeoenvironmental change. As new biomarker proxies continue to be developed and refined, there is further potential to answer emerging questions for Quaternary science and environmental change.

Cicada minimum age tree: Cryptic speciation and exponentially increasing base substitution rates in recent geologic time

We developed a new time-calibrated tree incorporating primarily endemic along with some cryptic Ryukyu islands cicada data, following the recent publication of global cicada data by Marshall et al. (2018), Łukasik et al. (2018), Simon et al. (2019), Price et al. (2019), and Hill et al. (2021). A total of 352 specimens were analyzed using BEAST v1. X software with a relaxed clock model. Fossil calibrations as old as Triassic were adopted largely following Johnson et al. (2018) and Moulds (2018), and a Quaternary geological event calibration was adopted following Osozawa et al. (2012, 2021b) and input into BEAST v1. X. Our timetree suggests that Tettigarctidae had a cicada basal lineage as old as 200.63 Ma, with Derotettiginae the next oldest lineage at 99.2 Ma. Tibicininae is a sister of the remaining subfamilies of Tettigomyiinae, Cicadettinae, and Cicadidae, and their species level differentiation and radiation began at 40.57 Ma. The Cicadinae clade consists of specific tribes with parapheletic relationship, and the vicariance and adaptive radiation generated many cryptic species in each tribe. We estimated base substitution rate as a function of age, and the result strongly indicates an exponential increase of base substitution rate in recent geologic time. The consequent increase in cicada biodiversity, including generation of cryptic species in the Ryukyu Islands and surroundings, may have been driven by the generation and spreading of C4 grasses and coeval Quaternary climate change.

Late Cenozoic deformation in the U.S. southern Colorado Front Range revealed by river profile analysis and fluvial terraces

Many post-orogenic settings exhibit a rugged topography, but the underlying mechanisms driving topographic rejuvenation are poorly understood. For example, the U.S. southern Colorado Front Range, a widely recognized and studied post-orogenic setting, contains deep canyons and steep channels even though the crustal deformation that built the range during the Laramide Orogeny ended at ca. 40 Ma. Two prevailing hypotheses are typically used to explain these topographically youthful features in the Colorado Front Range: (1) mantle dynamics and active tectonics during the late Cenozoic; and (2) enhanced erosional efficiency associated with Quaternary climatic changes. Here, we evaluate these end-member hypotheses through a tectonic geomorphological study of the upper Arkansas River Basin in southern Colorado. We perform river profile analysis on bedrock channels in the eastern Rockies and map and analyze fluvial terraces in the western High Plains. In the eastern Rockies, river knickpoints record a one- to two-stage increase in base-level fall rate downstream of the Colorado Front Range mountain front and an eastward increase in the magnitude of incision. In the western High Plains, Quaternary fluvial terraces also show an eastward increase in the total magnitude of incision. Supported by flexural and supplemental geomorphic analyses, these results suggest a previously undetected regional-scale, west-directed back-tilting associated with differential rock uplift. Based on the average timing of deformation, locations of major faults, and seismic activity, seismic tomographic data, and existing geodynamic models, we infer that this newly recorded westward tilting in the upper Arkansas Basin is the result of unsteady and potentially migrating dynamic topography that developed ca. 4 Ma.

Pleistocene glaciations caused the latitudinal gradient of within-species genetic diversity.

Intraspecific genetic diversity is a key aspect of biodiversity. Quaternary climatic change and glaciation influenced intraspecific genetic diversity by promoting range shifts and population size change. However, the extent to which glaciation affected genetic diversity on a global scale is not well established. Here we quantify nucleotide diversity, a common metric of intraspecific genetic diversity, in more than 38,000 plant and animal species using georeferenced DNA sequences from millions of samples. Results demonstrate that tropical species contain significantly more intraspecific genetic diversity than nontropical species. To explore potential evolutionary processes that may have contributed to this pattern, we calculated summary statistics that measure population demographic change and detected significant correlations between these statistics and latitude. We find that nontropical species are more likely to deviate from neutral expectations, indicating that they have historically experienced dramatic fluctuations in population size likely associated with Pleistocene glacial cycles. By analyzing the most comprehensive data set to date, our results imply that Quaternary climate perturbations may be more important as a process driving the latitudinal gradient in species richness than previously appreciated.

The genetic structure and demographic history of Zabelia tyaihyonii, endemic to Korean limestone karst forests, based on genome‐wide SNP markers

AbstractSimilar to the global phenomenon, many plant species endemic to Korean limestone karst forests are at risk of extinction due to human intervention. Zabelia tyaihyonii is a familiar shrub, called “Hardy abelia” and “Fragrant abelia” growing in the karst forests of Korea, where it is one of the most threatened species. We investigated the genetic structure and demographic history of Z. tyaihyonii, which allow us to develop appropriate conservation and management strategies. The genetic structure was evaluated using a total of 187 samples from 14 populations, covering the entire distribution of Z. tyaihyonii in South Korea. We utilized 254 and 1753 SNP loci obtained via MIG‐seq (Multiplexed ISSR Genotyping by sequencing) for structure and demographic analyses, respectively. The population demographic modeling was performed with site frequency spectrum. To gain further historical insights, we also employed ENM (Ecological Niche Modeling). We found two distinct clusters (CLI and CLII) of ancient origin (ca. 490 ka). Despite CLII experiencing a more severe bottleneck, both clusters showed similar levels of genetic diversity, indicating mutual historical gene flow. Their historical distribution range seems to have changed very little. We proposed a historical distribution scenario for Z. tyaihyonii, taking into account its intrinsic factors, and emphasized a more complex response to Quaternary climate change beyond simple allopatric speciation models. These findings provide valuable insights for conservation and management strategies for Z. tyaihyonii.

Understanding the characteristics of loess strata and quaternary climate changes in Luochuan, Shaanxi Province, China, through core analysis

Abstract Profile sampling, which causes missing or overlapping horizons, has been generally used while studying loess stratigraphy and paleoclimate. Conversely, drill sampling of thick loess can provide a relatively complete and actual record of the Quaternary climate and environmental changes. Here, paleomagnetic chronological analysis and particle size and magnetic susceptibility analyses were performed to accurately reveal the loess stratigraphy characteristics of Luochuan loess tableland in Fu County, Shaanxi Province, China. The FX core revealed that the Quaternary loess layer was 167.03 m thick and consisted of 33 layers of developed loess/paleosol sequences and 37 loess/paleosol assemblages. The paleosol horizons indicated relatively warm and humid climatic period, while loess/sand reflected cold and arid climate. Since 2.6 Ma, the climate of the region has undergone 37 warm and cold cycles trending toward an increasingly dry and cold climate. During this time, 10 paleoclimate cycles occurred during 2.6–1.6 Ma, 15 climate cycles occurred during 1.6–0.8 Ma, and 12 loess–paleosol cycles have occurred from 0.8 Ma to the present day. Our study provides a basis for accurately and comprehensively interpreting the paleoclimate and paleoenvironment during loess deposition formation.

Fluvial Responses to Late Quaternary Climate Change in a Humid and Semi-Humid Transitional Area: Insights from the Upper Huaihe River, Eastern China

Research into river processes in different climatic and geomorphic areas is vital for a clearer understanding of the non-linear responses of rivers to climate change. The Huaihe River (HHR) Basin, located in China’s North–South Transition Zone (NSTZ), provides an ideal environment in which to explore river responses to climate change within a humid/semi-humid transitional area. Based on optically stimulated luminescence (OSL) and 14C dating, combined with sedimentary stratigraphic analyses, we reconstructed the river processes of three sedimentary sequences in the upper HHR since the Late Quaternary. Our results showed that the upper HHR was characterized by aggrading meandering channels from the Last Glacial Maximum (LGM) to 0.5 ka, and an aggrading wandering channel from 0.2 ka to the present. Two periods of downcutting occurred during 5.8–3.0 and 0.5–0.2 ka, respectively. The river incision is potentially linked to changes in the climate during the Mid–Late Holocene transition and the Little Ice Age (LIA). However, there have been no marked changes in channel patterns in the upper HHR since the LGM. This phenomenon reflects the influence of vegetation on channel patterns during climate change. Our results showed that the fluvial processes in different climatic and geomorphic areas are controlled by the local hydroclimatic regime.

Redrawing the History of Celtis australis in the Mediterranean Basin under Pleistocene–Holocene Climate Shifts

Celtis australis remains are usually present in Palaeolithic sites of the Mediterranean Basin. However, their uncharred state of preservation and the absence of wood charcoal remains of this species raise some doubts regarding the contemporaneity of the remains and the deposit wherein they were found. The mineral composition of their endocarps and their possible use as food lead us to discuss the available data of Celtis australis during Prehistory. In this paper, the history of this species from the Lower Pleistocene to the Middle Holocene is reconstructed, considering the impact of the Quaternary climatic changes on its geographical distribution. The nutritional composition of Celtis australis fruits is analysed to assess their current value and potential as food, especially in Palaeolithic contexts. Based on these issues, the doubts about its presence in these contexts are dispelled and possibly explained by intentional human gathering in some sites, considering the high content in carbohydrates, proteins and minerals of their fruits. The chronological and geographical distribution of the Celtis spp. remains shows a coherence, which only the variations in the distribution of this taxon according to the regional climatic conditions can explain, especially disturbed by cold fluctuations, such as MIS 10 or 2. The radiocarbon dating presented here demonstrates the unquestionable presence of Celtis sp. in the Iberian Mediterranean Basin during MIS 3.

Global beta-diversity of angiosperm trees is shaped by Quaternary climate change.

As Earth's climate has varied strongly through geological time, studying the impacts of past climate change on biodiversity helps to understand the risks from future climate change. However, it remains unclear how paleoclimate shapes spatial variation in biodiversity. Here, we assessed the influence of Quaternary climate change on spatial dissimilarity in taxonomic, phylogenetic, and functional composition among neighboring 200-kilometer cells (beta-diversity) for angiosperm trees worldwide. We found that larger glacial-interglacial temperature change was strongly associated with lower spatial turnover (species replacements) and higher nestedness (richness changes) components of beta-diversity across all three biodiversity facets. Moreover, phylogenetic and functional turnover was lower and nestedness higher than random expectations based on taxonomic beta-diversity in regions that experienced large temperature change, reflecting phylogenetically and functionally selective processes in species replacement, extinction, and colonization during glacial-interglacial oscillations. Our results suggest that future human-driven climate change could cause local homogenization and reduction in taxonomic, phylogenetic, and functional diversity of angiosperm trees worldwide.

Demographic and spatially-explicit landscape genomic analyses in a tropical oak reveal the impacts of late Quaternary climate change on Andean montane forests.

Tropical Andes are one of the most important biodiversity hotspots on earth, yet our understanding on how their biotas have responded to Quaternary climatic oscillations is extraordinarily limited and the alternative models proposed to explain their demographic dynamics have been seldom formally evaluated. Here, we test the hypothesis that the interplay between the spatial configuration of geographical barriers to dispersal and elevational displacements driven by Quaternary cooling-warming cycles have shaped the demographic trajectories of montane oak forests (Quercus humboldtii) from the Colombian Andes. Specifically, we integrate genomic data and environmental niche modelling at fine temporal resolution to test competing spatially-explicit demographic and coalescent models, including scenarios considering (i) isotropic gene flow through the landscape, (ii) the hypothetical impact of contemporary barriers to dispersal (i.e., inter-Andean valleys), and (ii) distributional shifts of montane oak forests from the Last Glacial Maximum to present. Although our data revealed a marked genetic fragmentation of montane oak forests, statistical support for isolation-with-migration models indicate that geographically separated populations from the different Andean Cordilleras regularly exchange gene flow. Accordingly, spatiotemporally-explicit demographic analyses supported a model of flickering connectivity, with scenarios considering isotropic gene flow or currently unsuitable habitats as persistent barriers to dispersal providing a comparatively worse fit to empirical genomic data. Overall, these results emphasize the role of landscape heterogeneity on shaping spatial patterns of genomic variation in montane oak forests, rejecting the hypothesis of genetic continuity and supporting a significant impact of Quaternary climatic oscillations on their demographic trajectories.

Tectono‐Thermal Evolution of the Hope‐Kelly Fault System, Southern Alps, New Zealand: Insights From Topographic Analysis and (U‐Th)/He Thermochronology

AbstractThe fast‐slipping Alpine (∼30 mm/yr), Hope (∼10–20 mm/yr) and Kelly (∼6 mm/yr) faults in the South Island of New Zealand form a complex intersection zone that accommodates tectonic strain along the Australian‐Pacific plate boundary. Analysis of digital topography reveals evidence for stream capture, drainage divide migration, landscape responses to incipient fault development, and preserved enclaves of relic topography that collectively reflect complex interplays between active faulting and landscape evolution. (U‐Th)/He thermochronology of zircon (ZHe) and apatite (AHe) is used to investigate the low‐temperature thermal evolution of rocks in the intersection zone. Weighted mean sample ages for ZHe single grain ages (n = 13 samples) range from ∼9 to 2 Ma, and AHe multi‐grain and single grain aliquot ages (n = 9 samples) range from ∼1.5 to 0.5 Ma. Inverse and forward thermal history modeling reveals distinct spatiotemporal variations in thermal histories. Late Miocene exhumation rates (∼0.6–3.5 km/Myr, assuming geothermal gradients of 33–40 °C/km) through crustal depths of approximately 5–6 km, are interpreted to be controlled by proximity to the Alpine fault, with rocks proximal to the fault recording faster exhumation rates relative to distal samples. Establishment of the Hope‐Kelly fault system in the Quaternary structurally juxtaposed rocks with discordant cooling histories. Rocks throughout the study region record increased cooling rates from ∼2 Ma. Possible causal mechanisms include, spatial changes in rock uplift associated with transport toward the Alpine Fault, increased erosion rates associated with Quaternary climate change, or increased rock mass erodibility associated with development of the Hope‐Kelly fault system.