Quantum Yield Of Reaction Research Articles

Energy Storage upon Photochromic 6-π Photocyclization and Efficient On-Demand Heat Release with Oxidation Stimuli.

Photochromic molecules display reversible isomerization reactions between two isomers accompanied by an exchange between heat and chemical potential. A considerable part of the absorbed light energy is stored in and released from the present E-type photochromic molecules, which undergo cyclization reactions under UV light excitation and backward reactions after application of oxidative stimuli. The photochromic nature, thermal stability, and cascade ring-opening reaction of the closed form isomers of eight photochromic terarylenes are studied, and energy storage efficiencies at a single wavelength, η, as high as 23% are experimentally demonstrated. Their efficient photochemical quantum yield for the cyclization reaction markedly contributes to the high energy storage efficiency as well as showing the capability of efficient cascade cycloreversion reactions. Spontaneous cycloreversion reactions are well-suppressed because the forbidden nature of the cycloreversion reaction gives rise to sufficient heat storage duration.

Specific Activities of Hydromedusan Ca2+ -Regulated Photoproteins.

Nowadays the recombinant Ca2+ -regulated photoproteins originating from marine luminous organisms are widely applied to monitor calcium transients in living cells due to their ability to emit light on Ca2+ binding. Here we report the specific activities of the recombinant Ca2+ -regulated photoproteins-aequorin from Aequorea victoria, obelins from Obelia longissima and Obelia geniculata, clytin from Clytia gregaria and mitrocomin from Mitrocoma cellularia. We demonstrate that along with bioluminescence spectra, kinetics of light signals and sensitivities to calcium, these photoproteins also differ in specific activities and consequently in quantum yields of bioluminescent reactions. The highest specific activities were found for obelins and mitrocomin, whereas those of aequorin and clytin were shown to be lower. To determine the factors influencing the variations in specific activities the fluorescence quantum yields for Ca2+ -discharged photoproteins were measured and found to be quite different varying in the range of 0.16-0.36. We propose that distinctions in specific activities may result from different efficiencies of singlet excited state generation and different fluorescence quantum yields of coelenteramide bound within substrate-binding cavity. This in turn may be conditioned by variations in the amino acid environment of the substrate-binding cavities and hydrogen bond distances between key residues and atoms of 2-hydroperoxycoelenterazine.

The determination of oxidation rates and quantum yields during the photocatalytic oxidation of As(III) over TiO2

The determination of reaction rates for the photocatalytic oxidation (PCO) of arsenite (As(III)) using TiO2 under UV radiation is challenging due to the numerous experimental processes. This includes chemical processes running simultaneously with PCO (e.g. adsorption of arsenic species, direct UV photolysis of As(III)) and the analytical approach used (e.g. whether As(III) or As(V) are measured and used in the calculation of the PCO rate). The various experimental approaches used to date have led to oxidation rates and rate constants which vary by orders of magnitude and contradicting information on rate laws. Here we present the results of a critical examination of possible controls affecting the experimental determination of PCO rates. First, we demonstrate that the choice of analytical technique is not critical, provided that the rate constants are calculated based on the depletion of As(III) after correction of the directly adsorbed As(III). Second, we show the correction of the directly adsorbed As(III) at each time interval is best done by running two parallel experiments (one under UV and the other in dark) instead of running sequential experiment (i.e. running the experiment in the dark then turning on the UV lamp). These findings are supported by XPS analysis of the oxidation state of TiO2-sorbed As. Third, we demonstrate that photolysis by the light source itself, as well as the chemical composition of the solution (i.e. the effect of HEPES and the ionic strength), can significantly increase As(III) oxidation rates and need to be corrected. Finally, to determine the quantum yield of As(III) oxidation, we measured the photon absorption by the TiO2 photocatalyst. Our results showed that the quantum yield (Ø) for this oxidation reaction was low, and in the region of 0.1 to 0.2 %.

The Dependence of Chemical Quantum Yields of Visible Light Photoredox Catalysis on the Irradiation Power

AbstractDespite the great achievements of advanced photoredox catalysis for organic‐synthetic reactions, the literature is rather vague with respect to reaction quantum yields – the number of product molecules per absorbed photon. This stands in contrast to the clear and commonly used chemical yield as standard parameter to quantify the efficiency of chemical reactions. We applied an opto‐electronic device to measure the reaction quantum yields of a reference reaction in a rapid and facile way, which revealed that this parameter cannot be regarded as a single, isolated value. A so far undescribed strong dependence of the reaction quantum yield on the incident light power and the irradiation time was revealed. The light input even decides on the interplay of the closed photoredox catalytic cycle and the radical chain propagation. The reaction kinetics were modelled in full detail to obtain important insight into the general description of photoredox catalytic mechanisms.

PCET-Based Ligand Limits Charge Recombination with an Ir(III) Photoredox Catalyst.

Upon photoinitiated electron transfer, charge recombination limits the quantum yield of photoredox reactions for which the rates for the forward reaction and back electron transfer are competitive. Taking inspiration from a proton-coupled electron transfer (PCET) process in Photosystem II, a benzimidazole-phenol (BIP) has been covalently attached to the 2,2'-bipyridyl ligand of [Ir(dF(CF3)ppy)2(bpy)][PF6] (dF(CF3)ppy = 2-(2,4-difluorophenyl)-5-(trifluoromethyl)pyridine; bpy = 2,2'-bipyridyl). Excitation of the [Ir(dF(CF3)ppy)2(BIP-bpy)][PF6] photocatalyst results in intramolecular PCET to form a charge-separated state with oxidized BIP. Subsequent reduction of methyl viologen dication (MV2+), a substrate surrogate, by the reducing moiety of the charge separated species demonstrates that the inclusion of BIP significantly slows the charge recombination rate. The effect of ∼24-fold slower charge recombination in a photocatalytic phthalimide ester reduction resulted in a greater than 2-fold increase in reaction quantum efficiency.

Determining Factor of the Quantum Yield of the Cyclization Reaction via Triplet States for Dye-Attached Diarylethene.

The difference in the quantum yields of the cyclization reaction of two isomers of dye-attached diarylethene via the triplet state observed in the experiment [J. Phys. Chem. C 2009, 113, 11623-11627] was theoretically examined by quantum chemical calculations. By evaluating the spin-orbit couplings, we found that the ratio of the rate constants from the S1 state to the T2 state between two isomers agreed with that of the experimental quantum yield of the cyclization reaction. The difference in the spin-orbit couplings is due to the difference in the delocalization of the orbitals between diarylethene and dye. We further found that after the intersystem crossing took place the cyclization reaction via the triplet state occurred in the experiment due to the low energy barrier (∼10 kcal/mol) for the reaction.

First-Principles Nonadiabatic Dynamics Simulation of Azobenzene Photodynamics in Solutions.

The photoisomerization of azobenzene is a prototypical reaction of various light-activated processes in material and biomedical sciences. However, its reaction mechanism has been under debate for decades, partly due to the challenges in computational simulations to accurately describe the molecule's photodynamics. A recent study (J. Am. Chem. Soc. 2020, 142 (49), 20,680-20,690) addressed the challenges by combining the hole-hole Tamm-Dancoff Approximated (hh-TDA) density functional theory (DFT) method with the ab initio multiple spawning (AIMS) algorithm. The hh-TDA-DFT/AIMS method was applied to first-principles nonadiabatic dynamics simulation of azobenzene's photodynamics in the vacuum. However, it remains necessary to benchmark this new method in realistic molecular environments against experimental data. In the current work, the hh-TDA-DFT/AIMS method was employed in a quantum mechanics/molecular mechanics setting to characterize the trans azobenzene's photodynamics in explicit methanol and n-hexane solvents, following both the S1 (nπ*) and S2 (ππ*) excitations. The simulated absorption and fluorescence spectra following the S2 excitation quantitatively agree with the experiments. However, the hh-TDA-DFT method overestimates the torsional barrier on the S1 state, leading to an overestimation of the S1 state lifetime. The excited-state population decays to the ground state through two competing channels. The reactive channel partially yields the cis azobenzene photoproduct, and the unreactive channel exclusively leads to the reactant. The S2 excitation increases the decay through the unreactive channel and thus decreases the isomerization quantum yield compared to the S1 excitation. The solvent slows down the azobenzene's torsional dynamics on the S1 state, but its polarity minimally affects the reaction kinetics and quantum yields. Interestingly, the dynamics of the central torsion and angles of azobenzene play a critical role in determining the final isomer of the azobenzene. This benchmark study validates the hh-TDA-DFT/AIMS method's accuracy for simulating the azobenzene's photodynamics in realistic molecular environments.

Interrogation of O-ATRP Activation Conducted by Singlet and Triplet Excited States of Phenoxazine Photocatalysts.

Organocatalyzed ATRP (O-ATRP) is a growing field exploiting organic chromophores as photoredox catalysts (PCs) that engage in dissociative electron-transfer (DET) activation of alkyl-halide initiators following absorption of light. Characterizing DET rate coefficients (kact) and photochemical yields across various reaction conditions and PC photophysical properties will inform catalyst design and efficient use during polymerization. The studies described herein consider a class of phenoxazine PCs, where synthetic handles of core substitution and N-aryl substitution enable tunability of the electronic and spin characters of the catalyst excited state as well as DET reaction driving force (ΔGET0). Using Stern-Volmer quenching experiments through variation of the diethyl 2-bromo-2-methylmalonate (DBMM) initiator concentration, collisional quenching is observed. Eight independent measurements of kact are reported as a function of ΔGET0 for four PCs: four triplet reactants and four singlets with kact values ranging from 1.1 × 108 M-1 s-1, where DET itself controls the rate, to 4.8 × 109 M-1 s-1, where diffusion is rate-limiting. This overall data set, as well as a second one inclusive of five literature values from related systems, is readily modeled with only a single parameter of reorganization energy under the frameworks of the adiabatic Marcus electron-transfer theory and Marcus-Savéant theory of DET. The results provide a predictive map where kact can be estimated if ΔGET0 is known and highlight that DET in these systems appears insensitive to PC reactant electronic and spin properties outside of their impact on the driving force. Next, on the basis of measured kact values in selected PC systems and knowledge of their photophysics, we also consider activation yields specific to the reactant spin states as the DBMM initiator concentration is varied. In N-naphthyl-containing PCs characterized by near-unity intersystem crossing, the T1 is certainly an important driver for efficient DET. However, at DBMM concentrations common to polymer synthesis, the S1 is also active and drives 33% of DET reaction events. Even in systems with low yields of ISC, such as in N-phenyl-containing PCs, reaction yields can be driven to useful values by exploiting the S1 under high DBMM concentration conditions. Finally, we have quantified photochemical reaction quantum yields, which take into account potential product loss processes after electron-transfer quenching events. Both S1 and T1 reactant states produce the PC•+ radical cation with a common yield of 71%, thus offering no evidence for spin selectivity in deleterious back electron transfer. The subunity PC•+ yields suggest that some combination of solvent (DMAc) oxidation and energy-wasting back electron transfer is likely at play and these pathways should be factored in subsequent mechanistic considerations.

Predicting wavelength-dependent photochemical reactivity and selectivity

Predicting the conversion and selectivity of a photochemical experiment is a conceptually different challenge compared to thermally induced reactivity. Photochemical transformations do not currently have the same level of generalized analytical treatment due to the nature of light interaction with a photoreactive substrate. Herein, we bridge this critical gap by introducing a framework for the quantitative prediction of the time-dependent progress of photoreactions via common LEDs. A wavelength and concentration dependent reaction quantum yield map of a model photoligation, i.e., the reaction of thioether o-methylbenzaldehydes via o-quinodimethanes with N-ethylmaleimide, is initially determined with a tunable laser system. Combined with experimental parameters, the data are employed to predict LED-light induced conversion through a wavelength-resolved numerical simulation. The model is validated with experiments at varied wavelengths. Importantly, a second algorithm allows the assessment of competing photoreactions and enables the facile design of λ-orthogonal ligation systems based on substituted o-methylbenzaldehydes.

Development of High‐Performance Pyrimidine Nucleoside and Oligonucleotide Diarylethene Photoswitches

AbstractNucleosidic and oligonucleotidic diarylethenes (DAEs) are an emerging class of photochromes with high application potential. However, their further development is hampered by the poor understanding of how the chemical structure modulates the photochromic properties. Here we synthesized 26 systematically varied deoxyuridine‐ and deoxycytidine‐derived DAEs and analyzed reaction quantum yields, composition of the photostationary states, thermal and photochemical stability, and reversibility. This analysis identified two high‐performance photoswitches with near‐quantitative, fully reversible back‐and‐forth switching and no detectable thermal or photochemical deterioration. When incorporated into an oligonucleotide with the sequence of a promotor, the nucleotides maintained their photochromism and allowed the modulation of the transcription activity of T7 RNA polymerase with an up to 2.4‐fold turn‐off factor, demonstrating the potential for optochemical control of biological processes.

Development of High-Performance Pyrimidine Nucleoside and Oligonucleotide Diarylethene Photoswitches.

Nucleosidic and oligonucleotidic diarylethenes (DAEs) are an emerging class of photochromes with high application potential. However, their further development is hampered by the poor understanding of how the chemical structure modulates the photochromic properties. Here we synthesized 26 systematically varied deoxyuridine‐ and deoxycytidine‐derived DAEs and analyzed reaction quantum yields, composition of the photostationary states, thermal and photochemical stability, and reversibility. This analysis identified two high‐performance photoswitches with near‐quantitative, fully reversible back‐and‐forth switching and no detectable thermal or photochemical deterioration. When incorporated into an oligonucleotide with the sequence of a promotor, the nucleotides maintained their photochromism and allowed the modulation of the transcription activity of T7 RNA polymerase with an up to 2.4‐fold turn‐off factor, demonstrating the potential for optochemical control of biological processes.

Femtochemistry of Rhodopsins

The review considers the spectral kinetic data obtained by us by femtosecond absorption laser spectroscopy for the photochromic reaction of retinal isomerization in animal rhodopsin (type II), namely, bovine visual rhodopsin and microbial rhodopsins (type I), such as Exiguobacterium sibiricum rhodopsin and Halobacterium salinarum bacteriorhodopsin. It is shown that the elementary act of the photoreaction of retinal isomerization in type I and type II rhodopsins can be interpreted as a transition through a conical intersection with retention of the coherence of the vibrational wave packets generated during excitation. The coherent nature of the reaction is most pronounced in visual rhodopsin as a result of the barrier-free movement along the excited surface of potential energy, which also leads to an extremely high rate of retinal isomerization compared to microbial rhodopsins. Differences in the dynamics of photochemical reactions of type I and type II rhodopsins can be related to both differences in the initial isomeric forms of their chromophores (all-trans and 11-cis retinal, respectively), as well as with the effect of the protein environment on the chromophore. Despite the practically identical values of the quantum yields of the direct photoreaction of visual rhodopsin and bacteriorhodopsin, the reverse photoreaction of visual rhodopsin is much less effective (φ = 0.15) than in the case of bacteriorhodopsin (φ = 0.81). It can be assumed that the photobiological mechanism for converting light into an information process in the evolutionarily younger visual rhodopsins (type II rhodopsins) should be more reliable than the mechanism for converting light into a photoenergetic process in the evolutionarily more ancient microbial rhodopsins (type I rhodopsins). The low value of the quantum yield of the reverse reaction of visual rhodopsin can be considered as an increase in the reliability of the forward reaction, which triggers the process of phototransduction.

Determination of the real quantum yield of the heterogeneous photocatalytic H2 production reaction and insights

Determination of the real quantum yield (QY) of a heterogeneous photocatalytic H2 production reaction is crucial and challenging. Here, we constructed a setup enabling the exact measurement of the number of incident photons received by photo-vessel, and the directly absorbed part by photocatalysts, thus achieving simultaneous determination of QY and apparent quantum yield (AQY). It turns out that over the whole investigated wavelength region, the value of AQY is significantly smaller than that of QY. For instance, the AQY and QY of Cd0.5Zn0.5S were measured as 40% and 70% at 420 nm, respectively. We have demonstrated that a lot of incident photons are scattered by the photocatalyst particles and dissipated, instead of being absorbed and converted. It indicates that the true photocatalytic performance of a photocatalyst could have been severely underestimated in the past by AQY in previous studies. Therefore, our work should be valuable for accurate catalytic efficiency evaluation of a photocatalyst, and contributes to the rapid development of the technology.

The effect of the rate of photoinduced electron transfer on the photodecarboxylation efficiency in phthalimide photochemistry

Reactivity in photoinduced electron transfer reactions (PET) has been investigated in a series of molecules possessing different distances between the electron donor (carboxylate or alkoxyphenyl) and the phthalimide as the electron acceptor. The molecules were strategically designed to separate the donor and the acceptor by a rigid adamantane spacer or through a peptide backbone with different number of amino acid residues. PET was investigated by laser flash photolysis (LFP). Although previous reports demonstrated that the quantum yields of the photodecarboxylation reaction (ΦR) depend on the distance between the donor and acceptor moieties, the measured lifetimes of the triplet excited state did not provide information on the rates of PET. Due to reversible PET and back electron transfer processes in compounds 1-5, the measured lifetimes correspond to the sum of the rate constants for the disappearance of the charge transfer species. In the series of peptides, three different PET processes take place and LFP provided rate constant for the reactions occurring subsequent to the intrastrand PET between the carboxylate and the alkoxyphenyl radical cation. The understanding of the factors that affect intramolecular PET processes is important for the rational design of different applications.

Efficient aerobic oxidation of alcohols to esters by acidified carbon nitride photocatalysts

Photocatalytic aerobic oxidation of alcohols for the direct synthesis of esters has received significant attention in recent years, but the relatively low efficiency and selectivity under visible light irradiation is the main challenge for their practical applications. Here, surface acidic sites were imparted onto metal-free heterogeneous photocatalysts by the protonation of carbon nitride (HMCN) to promote the activity for the esterification reaction through further adsorption and activation of the intermediate aldehyde. The activation of the substrate could be remarkably modulated through tuning the acidic sites on the surface of the photocatalyst, leading to a controllable reactivity of the catalytic reaction. The one-pot process for the direct aerobic oxidative esterification of alcohol exhibits high efficiency and selectivity under mild and additive-free conditions and the apparent quantum yield (AQY) of the photocatalytic esterification reaction is 0.41% at 420 nm. Moreover, a scalable photocatalytic process by the merging of a continuous flow system with the heterogeneous HMCN photocatalyst is demonstrated, combining high catalytic efficiency and stability at ambient temperatures and being promising for larger-scale applications.

Ultrafast excited state dynamics, direct and back [2 + 2]-cross-photocycloaddition of a styryl dye–stilbene charge transfer complex

This research is dedicated to the study of bis(ammoniopropyl) derivative of (E)-4-(4-mercaptostyryl)pyridine dye (2), forming a highly stable bimolecular complex with a bis(18-crown-6 ether) derivative of (E)-stilbene (1) in solution owing to ditopic coordination via hydrogen bonds. The spectral-kinetic parameters of E isomer of the dye and its complex were obtained using steady-state absorption, fluorescence, and time-resolved absorption spectroscopy. The stability constant of the complex, quantum yields of cross-PCA and retro-PCA reactions were determined by spectrophotometric titration methods. According to density functional theory calculations, E–Z photoisomerization of dye 2 occurs via non-radiative deactivation from intermediate twisted (TICT) state. The detailed study of stereospecific [2 + 2]-cross-photocycloaddition (cross-PCA) of complex (E)-1·(E)-2 and back reaction of cross-PCA product (rctt-3) was carried out. The complexation reaction of cyclobutane rctt-3 with Ba2+ ions has been investigated. A highly efficient direct intrasupramolecular photoelectron transfer and the back electron transfer of a moderate efficiency were found for the complex (E)-1·(E)-2.

A Master Equation for Photochemical Rates.

Traditionally, the general photochemical rate equation could be integrated only at two limits (high concentration and low concentration). In this paper, the general photochemical equation has been integrated to yield a master equation that is valid for any chromophore concentration. Hence, in future, data for all concentrations can be utilized in deriving the incident photon flux and/or the quantum yield for a photochemical reaction. Unfortunately, the master equation can only be used for monochromatic light sources.

Morphology-Governed Performance of Plasmonic Photocatalysts

Plasmonic photocatalysts have been extensively studied for the past decade as a possible solution to energy crisis and environmental problems. Although various reports on plasmonic photocatalysts have been published, including synthesis methods, applications, and mechanism clarifications, the quantum yields of photochemical reactions are usually too low for commercialization. Accordingly, it has been proposed that preparation of plasmonic photocatalysts with efficient light harvesting and inhibition of charge carriers’ recombination might result in improvement of photocatalytic activity. Among various strategies, nano-architecture of plasmonic photocatalysts seems to be one of the best strategies, including the design of properties for both semiconductor and noble-metal-deposits, as well as the interactions between them. For example, faceted nanoparticles, nanotubes, aerogels, and super-nano structures of semiconductors have shown the improvement of photocatalytic activity and stability. Moreover, the selective deposition of noble metals on some parts of semiconductor nanostructures (e.g., specific facets, basal or lateral surfaces) results in an activity increase. Additionally, mono-, bi-, and ternary-metal-modifications have been proposed as the other ways of performance improvement. However, in some cases, the interactions between different noble metals might cause unwanted charge carriers’ recombination. Accordingly, this review discusses the recent strategies on the improvements of the photocatalytic performance of plasmonic photocatalysts.

Di(benzothienyl)cyclobutenes: Toward Strained Photoswitchable Fluorophores.

Bis(benzothienyl)ethene sulfones are very interesting molecules for super-resolution microscopy due to their photoswitching properties. However, functionalization of the 'classical' bis(benzothienyl)ethene sulfones with a five-membered central ring leads to significant decrease of quantum yields of photoconversion of the fluorescent closed form of the dye to the non-fluorescent open form that limits their application in microscopy. Here, we designed and synthesized diarylethenes with a fluorinated four-membered central ring that adds extra strain to the closed form of the dye. The reaction mechanism of their formation was studied, and byproducts formed upon structural rearrangement of the benzothiophene fragment were characterized. The photochromic properties of the new molecules were investigated by NMR and absorption spectroscopy. Some of these compounds show enhanced tendency to ring opening and have quantum yields of the ring-opening reaction in the range of 0.2-0.5.

Palette of Luciferases: Natural Biotools for New Applications in Biomedicine

Optoanalytical methods based on using genetically encoded bioluminescent enzymes,luciferases, allow one to obtain highly sensitive signals, are non-invasive, and require no external irradiation. Bioluminescence is based on the chemical reaction of oxidation of a low-molecular-weight substrate (luciferin) by atmospheric oxygen, which is catalyzed by an enzyme (luciferase). Relaxation of the luciferin oxidation product from its excited state is accompanied by a release of a quantum of light, which can be detected as an analytical signal.The ability to express luciferase genes in various heterological systems and high quantum yields of luminescence reactions have made these tools rather popular in biology and medicine. Amongseveral naturally available luciferases, a few have been found to be useful for practicalapplication. Luciferase size, the wavelength of its luminescence maximum, enzyme thermostability, optimal pH of the reaction, and the need for cofactors areparameters that may differ for luciferases from different groups of organisms, and this fact directly affects the choice of the application area for each enzyme. It is quite important to overview the whole range of currently available luciferases based ontheir biochemical properties before choosing one bioluminescent probe suitable for a specific application.