The development of Information Technology and Communications facilitate people running their daily lives. One of the important role in development is application development which is the main element in the development of technology. Due to this reason, it is required to have an application that would satisfy the criteria of standard qualities without any tolerance towards error and failure during process. This paper focused on the design of indicator that can be used in measuring qualities in application development, with Student Desk Portal at Bina Nusantara University used as case study is accessed by thousands of students each week. For this reason, the quality of the application is extremely important. The designed indicators are applied in the development of 35 modules in the Student Desk Portal application. The result shows that after applying the designed indicators in the application development, the number of bugs and errors found in the implementation drastically reduced from 43% to 23%.