Three-year-old trees of some Japanese pear ( Pyrus serotina Rehd.) cultivars of different growth habits (extent of apical dominance) were used. Scaffold branches were trained either vertically or laterally. Diffusible indole-3-acetic acid (IAA) levels in the terminal shoot were higher in the order of cultivars ‘Shinsui’ (strong), ‘Kosui’ (intermediate), and ‘Hosui’ (weak) in an early period, which was the reverse order of their branching ability. Scaffold branch orientation per se did not affect diffusible IAA levels in the various parts of the tree. In all cultivars, after bud break, diffusible IAA levels rapidly increased in all parts, especially in the upper part of the tree, showing a downward gradient from the shoot towards the root. A peak level in the shoot, or in the trunk, was reached prior to the period of most rapid extension growth or radial growth, respectively. The reduction of the level commenced first in the shoot, and spread basipetally towards the root. Diffusible IAA levels were associated with an increment of the growth rate rather than with the growth rate. During the growing season, extractable IAA in the cambial regions changed in a similar way to the diffusible IAA level. However, unlike diffusible IAA, extractable IAA increased and maintained a high level during the non-growing season. Removal of all shoots after cessation of the extension growth markedly decreased diffusible and extractable IAA levels in the rest of the tree.