Abstract To clarify the regional distribution and characteristics of the sedimentary deposits in the northern part of the Philippine Sea, multichannel seismic reflection surveys of 26 864 km in total length were performed. The seismic reflection data were interpreted and correlated with available Deep Sea Drilling Project/Ocean Drilling Program (DSDP/ODP) data and a general stratigraphic framework of the area was established. The sedimentary deposits in this area were divided into five layers; Units I, II, III, IV and V in ascending order. Their approximate geological ages are the Early Eocene, Middle to Late Eocene, Oligocene, Miocene and Pliocene‐Pleistocene, respectively. Seismic records were classified into three seismic facies, Facies A, B and C, on the basis of their characteristics. They were judged to represent pelagic and hemipelagic sediments of non‐volcanic origin, fine pyroclastic sediments and coarse pyroclastic or volcanic sediments, respectively, by comparing them with lithological data in the DSDP/ODP holes. From the thickness and facies distributions of these sediments, a sedimentary history in the area was reconstructed as follows. The oldest sediments in the study area, Unit I, interfinger with some parts of the Daito Ridge (acoustic basement) in the Minami Daito Basin. The geological age of the unit is estimated by microfossils in the sediment and supports the idea that this part of the Daito Ridge is composed of the Early Eocene oceanic basalt. Later, a fair amount of sediments were deposited in the Minami Daito Basin in the Middle to Late Eocene age. A large volume of volcanic materials was supplied from the Paleo‐Kyushu‐Palau Ridge in the Kita Daito Basin in the Eocene and Oligocene ages. The eastern part of the Shikoku and Parece Vela basins is characterized by volcanic sediments supplied from the Nishi Shichito and West Mariana Ridges in the Miocene age. However, pelagic and hemipelagic sediments prevail in the northern part of the Shikoku Basin in the Miocene or later. In short, the area of principal sedimentation has generally shifted from west to east through geological time, reflecting the evolution of the island arc systems with the same trend in the northern Philippine Sea.