Auditing is an activity, process or effort to measure the level of achievement of the previously planned goals and objectives at a conceptual, theoretical and practical level after a certain period of time. Auditing in public administration, on the other hand, refers to the realization of the level of fulfillment of these activities within the framework of the duties and responsibilities of public institutions and organizations from the legal texts such as the constitution, law, and regulation. Indeed, public administration is a political organization. The public administration in Turkey is controlled by various types of controls. However, significant problems have emerged in the Turkish public control system from past to present. Turkey, especially after the 2000s, with a new understanding of public administration reform and the axis applications from traditional inspection system focused on performance and risk control is passed to the structure. Auditing problems arising from the main problems of Turkish public administration are also tried to be overcome with modern auditing techniques and methods. The purpose of this study is to identify major problems in the Turkish public administration control system and make systematic suggestions for their solution.