Rate Constants For Proton Transfer Research Articles

Circumventing Kinetic Barriers to Metal Hydride Formation with Metal-Ligand Cooperativity.

We report the two-electron, one-proton mechanism of cobalt hydride formation for the conversion of [CoIIICp(PPh2NBn2)(CH3CN)]2+ to [HCoIIICp(PPh2NBn2)]+. This complex catalytically converts CO2 to formate under CO2 reduction conditions, with hydride formation as a key elementary step. Through a combination of electrochemical measurements, digital simulations, theoretical calculations, and additional mechanistic and thermochemical studies, we outline the explicit role of the PPh2NBn2 ligand in the proton-coupled electron transfer (PCET) reactivity that leads to hydride formation. We reveal three unique PCET mechanisms, and we show that the amine on the PPh2NBn2 ligand serves as a kinetically accessible protonation site en route to the thermodynamically favored cobalt hydride. Cyclic voltammograms recorded with proton sources that span a wide range of pKa values show four distinct regimes where the mechanism changes as a function of acid strength, acid concentration, and timescale between electrochemical steps. Peak shift analysis was used to determine proton transfer rate constants where applicable. This work highlights the astute choices that must be made when designing catalytic systems, including the basicity and kinetic accessibility of protonation sites, acid strength, acid concentration, and timescale between electron transfer steps, to maximize catalyst stability and efficiency.

Ultrasonic monitoring of enzymatic hydrolysis of proteins. 2. relaxation effects

The paper investigates the occurrence of relaxation processes in enzymatic hydrolysis of whey proteins in phosphate buffer using high-resolution ultrasonic spectroscopy. The hydrolysis produces a frequency-dependent evolution of ultrasonic velocity and attenuation originated by the proton transfer between the phosphate ions and the terminal −NH2 group of protein hydrolysates. Such frequency dependence is absent in other systems, e.g., Tris buffer. Real-time profiles of ultrasonic velocity and attenuation measured during the hydrolysis of β–lactoglobulin, α–lactalbumin and bovine serum albumin by α–chymotrypsin were employed in quantitative analysis of the relaxation mechanisms, relaxation times, determination of the proton transfer rate constants and the reaction volume. The proton transfer is characterised by the rate constant 9.4 × 107 L mol−1 s−1 and the adiabatic reaction volume 24 × 10−6 m3 mol−1. The obtained reaction volume agrees well with thermodynamic data for ionisation volumes and enthalpies of the terminal amino group and phosphate. The described methodology for estimating the relaxation contribution to ultrasonic characteristics allows for precision real-time ultrasonic measurements of the concentration of peptide bonds cleaved during protein hydrolysis in a broad range of environmental conditions.

Proton transfer kinetics of transition metal hydride complexes and implications for fuel-forming reactions.

Proton transfer reactions involving transition metal hydride complexes are prevalent in a number of catalytic fuel-forming reactions, where the proton transfer kinetics to or from the metal center can have significant impacts on the efficiency, selectivity, and stability associated with the catalytic cycle. This review correlates the often slow proton transfer rate constants of transition metal hydride complexes to their electronic and structural descriptors and provides perspective on how to exploit these parameters to control proton transfer kinetics to and from the metal center. A toolbox of techniques for experimental determination of proton transfer rate constants is discussed, and case studies where proton transfer rate constant determination informs fuel-forming reactions are highlighted. Opportunities for extending proton transfer kinetic measurements to additional systems are presented, and the importance of synergizing the thermodynamics and kinetics of proton transfer involving transition metal hydride complexes is emphasized.

Proton-transfer rate constants for the determination of organic indoor air pollutants by online mass spectrometry.

Proton transfer reaction mass spectrometry (PTR-MS) has become an indispensable analytical tool for indoor related sciences. With high-resolution techniques not only is the online monitoring of the selected ions in the gas phase possible, but also, with some limitations, the identification of substance mixtures without chromatographic separation. The quantification is carried out with the help of kinetic laws, which require knowledge of the conditions in the reaction chamber, the reduced ion moblilities and the reaction rate constant kPT under these conditions. Ion-dipole collision theory can be used to calculate kPT. One approach is an extension of Langevin's equation and is known as average dipole orientation (ADO). In a further development, the analytical solution of ADO was replaced by trajectory analysis, which resulted in capture theory. The calculations according to ADO and capture theory require precise knowledge of the dipole moment and the polarizability of the respective target molecule. However, for many relevant indoor related substances, these data are insufficiently known or not known at all. Consequently, the dipole moment μD and polarizability α of 114 organic compounds that are frequently found in indoor air had to be determined using advanced quantum mechanical methods. This required the development of an automated workflow that performs conformer analysis before computing μD and α using density functional theory (DFT). Then the reaction rate constants with the H3O+ ion are calculated according to the ADO theory (kADO), capture theory (kcap) and advanced capture theory for different conditions in the reaction chamber. The kinetic parameters are evaluated with regard to their plausibility and critically discussed for their applicability in PTR-MS measurements.

Quantification of Excited-State Brønsted–Lowry Acidity of Weak Photoacids Using Steady-State Photoluminescence Spectroscopy and a Driving-Force-Dependent Kinetic Theory

Photoacids and photobases constitute a class of molecules that upon absorption of light undergoes a reversible change in acidity, i.e. pKa. Knowledge of the excited-state pKa value, pKa*, is critical for predicting excited-state proton-transfer behavior. A reasonable approximation of pKa* is possible using the Förster cycle analysis, but only when the ground-state pKa is known. This poses a challenge for the study of weak photoacids (photobases) with less acidic (basic) excited states (pKa* (pKb*) > 7), because ground-state pKa (pKb) values are >14, making it difficult to quantify them accurately in water. Another method to determine pKa* relies on acid-base titrations with photoluminescence detection and Henderson-Hasselbalch analysis. This method requires that the acid dissociation reaction involving the thermally equilibrated electronic excited state reaches chemical quasi-equilibrium, which does not occur for weak photoacids (photobases) due to slow rates of excited-state proton transfer. Herein, we report a method to overcome these limitations. We demonstrate that liquid water and aqueous hydroxide are unique proton-accepting quenchers of excited-state photoacids. We determine that Stern-Volmer quenching analysis is appropriate to extract rate constants for excited-state proton transfer in aqueous solutions from a weak photoacid, 5-aminonaphthalene-1-sulfonate, to a series of proton-accepting quenchers. Analysis of these data by Marcus-Cohen bond-energy-bond-order theory yields an accurate value for pKa* of 5-aminonaphthalene-1-sulfonate. Our method is broadly accessible because it only requires readily available steady-state photoluminescence spectroscopy. Moreover, our results for weak photoacids are consistent with those from previous studies of strong photoacids, each showing the applicability of kinetic theories to interpret driving-force-dependent rate constants for proton-transfer reactions.

Redox-Induced Structural Reorganization Dictates Kinetics of Cobalt(III) Hydride Formation via Proton-Coupled Electron Transfer.

Two-electron, one-proton reactions of a family of [CoCp(dxpe)(NCCH3)]2+ complexes (Cp = cyclopentadienyl, dxpe = 1,2-bis(di(aryl/alkyl)phosphino)ethane) form the corresponding hydride species [HCoCp(dxpe)]+ (dxpe = dppe (1,2-bis(diphenylphosphino)ethane), depe (1,2-bis(diethylphosphino)ethane), and dcpe (1,2-bis(dicyclohexylphosphino)ethane)) through a stepwise proton-coupled electron transfer process. For three [CoCp(dxpe)(NCCH3)]2+ complexes, peak shift analysis was employed to quantify apparent proton transfer rate constants from cyclic voltammograms recorded with acids ranging 22 pKa units. The apparent proton transfer rate constants correlate with the strength of the proton source for weak acids, but these apparent proton transfer rate constants curiously plateau (kpl) as the reaction becomes increasingly exergonic. The absolute apparent proton transfer rate constants across both these regions correlate with the steric bulk of the chelating diphosphine ligand, with bulkier ligands leading to slower kinetics (kplateau,depe = 3.5 × 107 M-1 s-1, kplateau,dppe = 1.7 × 107 M-1 s-1, kplateau,dcpe = 7.1 × 104 M-1 s-1). Mechanistic studies were conducted to identify the cause of the aberrant kPTapp-ΔpKa trends. When deuterated acids are employed, deuterium incorporation in the Cp ring is observed, indicating protonation of the CoCp(dxpe) species to form the corresponding hydride proceeds via initial ligand protonation. Digital simulations of cyclic voltammograms show ligand loss accompanying initial reduction gates subsequent PCET activity at higher driving forces. Together, these experiments reveal the details of the reaction mechanism: reduction of the Co(III) species is followed by dissociation of the bound acetonitrile ligand, subsequent reduction of the unligated Co(II) species to form a Co(I) species is followed by protonation, which occurs at the Cp ring, followed by tautomerization to generate the stable Co(III)-hydride product [HCoCp(dxpe)]+. Analysis as a function of chelating disphosphine ligand, solvent, and acid strength reveals that the ligand dissociation equilibrium is directly influenced by the steric bulk of the phosphine ligands and gates protonation, giving rise to the plateau of the apparent proton transfer rate constant with strong acids. The complexity of the reaction mechanism underpinning hydride formation, encompassing dynamic behavior of the entire ligand set, highlights the critical need to understand elementary reaction steps in proton-coupled electron transfer reactions.

Non-conservation of activation energy barriers in the same chemical process: a cooperative (effect) proton transfer on (HF)n molecular aggregates

The formation of (HF)n aggregates with n = 2, 3, 4, 5 and 6 and concerted proton transfer processes in these aggregates were systematically analyzed. It was verified that, by a cooperative effect, the barrier associated with the proton transfer process decreases for aggregates with a larger number of molecules, indicating that the activation energy for proton transfer depends on the molecularity of the process. Natural bond orbital and quantum theory of atoms in molecules were used to characterize the strength of the hydrogen bonds established in the aggregates, which verified a general increase in the delocalization energy as a function of increasing aggregate size. A deformed Eyring (d-Eyring) equation was used to calculate the proton transfer rate constants, where the d-Eyring equation adequately described the proton transfer kinetics. Analysis of the rate constants showed that proton transfer became faster as the cluster size increased. Arrhenius and d-Arrhenius plots showed a decrease in the dependence of the rate constants on temperature, particularly for the tetramer, pentamer, and hexamer. The d-Arrhenius plots, for which the d parameter was included in the Eyring equation, suggest non-Arrhenius behavior for proton transfer in the HF aggregates at low temperatures.

Coordination Dynamics of Zinc Triggers the Rate Determining Proton Transfer in Human Carbonic Anhydrase II.

We present, for the first time, how transient changes in the coordination number of zinc ion affects the rate determining step in the enzyme human carbonic anhydrase (HCA) II. The latter involves an intramolecular proton transfer between a zinc-bound water and a distant histidine residue (His-64). In the absence of time-resolved experiments, results from classical and QM-MM molecular dynamics and transition path sampling simulations are presented. The catalytic zinc ion is found to be present in two possible coordination states; viz. a stable tetra-coordinated state, T and a less stable penta-coordinated state, P with tetrahedral and trigonal bipyramidal coordination geometries, respectively. A fast dynamical inter-conversion occurs between T and P due to reorganization of active site water molecules making the zinc ion more positively charged in state P. When initiated from different coordination environments, the most probable mechanism of proton transfer is found to be deprotonation of the equatorial water molecule from state P and transfer of the excess proton via a short path formed by hydrogen bonded network of active site water molecules. We estimate the rate constant of proton transfer as from P and from T. A quantitative match of estimated kP with the experimental value, ( ) suggests that dynamics of Zn coordination triggers the rate determining proton transfer step in HCA II.

Proton-Coupled Electron Transfer Kinetics for the Photoinduced Generation of a Cobalt(III)-Hydride Complex.

Studying the formation of transition metal hydride complexes via proton-coupled electron transfer is important for developing next-generation molecular catalysts for hydrogen evolution. We report herein the study of stepwise photoinduced reduction and protonation of [CoIICp(dppe)]+ (Cp = cyclopentadienyl, dppe = 1,2-bis(diphenylphosphino)ethane) to form the corresponding hydride complex [HCoIIICp(dppe)]+. Reaction intermediates were optically tracked using transient absorption spectroscopy, and a combination of experimental fitting and kinetic simulations was used to determine apparent rate constants for electron transfer and proton transfer with a range of acid sources. A linear free energy relationship is observed between measured apparent proton transfer rate constants and acid strength, but marked differences from previously electrochemically determined protonation rate constants are found. These deviations, which stem from ground-state reactivity present in photochemical experiments, highlight the challenges in comparing mechanistic studies using different techniques.

A Charge-Transfer-Resistance Model for Proton Transmission through CVD Single-Layer Graphene in Proton-Exchange-Membrane Cells

High-rate proton transmission through single-layer graphene has been reported by several research groups but the mechanism by which it occurs is still not clear. Low activation energies for proton transmission have been experimentally obtained but are difficult to reconcile with computational modeling studies that predict high activation energies and low transmission rates for protons passing through pristine single-layer graphene at ambient temperatures. It seems likely that a reaction coordinate with an activated complex structure involving proton passage through graphene is involved, though the structural details of such a complex are still not clear. This lecture will review some of our recent experimental results on proton transmission rates through CVD single-layer graphene at variable temperature, with special attention to a kinetics model whereby experimentally-obtained proton-transfer resistances are interpreted as proton-transfer resistances that are linked to heterogeneous proton—transfer rate constants, in a manner that is formally similar to the Butler-Volmer model used to treat electron-transfer rate data in the low overpotential limit. The heterogeneous proton-transfer rate constants are then interpreted using a pre-equilibrium model for protons approaching graphene, coupled to a first-order rate constant for proton transmission through graphene from the pre-equilibrium complex. This first-order proton-transmission rate constant has fundamental significance and may be interpreted in terms of an activation energy and frequency factor for proton transmission. In applying such an analysis to our proton transmission rate data, we obtain a proton-transmission frequency factor that is within a factor of two of the vibrational frequency of the O-H bond in water, suggesting that O-H bond vibration is involved in the rate-determining step of proton transmission.

Substitutions of S101 decrease proton and hydride transfers in the oxidation of betaine aldehyde by choline oxidase

Choline oxidase oxidizes choline to glycine betaine, with two flavin-mediated reactions to convert the alcohol substrate to the carbon acid product. Proton abstraction from choline or hydrated betaine aldehyde in the wild-type enzyme occurs in the mixing time of the stopped-flow spectrophotometer, thereby precluding a mechanistic investigation. Mutagenesis of S101 rendered the proton transfer reaction amenable to study. Here, we have investigated the aldehyde oxidation reaction catalyzed by the mutant enzymes using steady-state and rapid kinetics with betaine aldehyde. Stopped-flow traces for the reductive half-reaction of the S101T/V/C variants were biphasic, corresponding to the reactions of proton abstraction and hydride transfer. In contrast, the S101A enzyme yielded monophasic traces like wild-type choline oxidase. The rate constants for proton transfer in the S101T/C/V variants decreased logarithmically with increasing hydrophobicity of residue 101, indicating a behavior different from that seen previously with choline for which no correlation was determined. The rate constants for hydride transfer also showed a logarithmic decrease with increasing hydrophobicity at position 101, which was similar to previous results with choline as a substrate for the enzyme. Thus, the hydrophilic character of S101 is necessary not only for efficient hydride transfer but also for the proton abstraction reaction.

Potential energy construction in the diabatic picture for quantum mechanical rate constants of intermolecular proton transfer.

We propose a simple method for potential construction in the diabatic picture and the estimation of thermal rate constants for intermolecular proton transfer reactions using quantum dynamics simulations carried out on the constructed potentials. For symmetrical and asymmetrical proton transfer pairs, the obtained potentials and rate constants were in good agreement with the reference values. Furthermore, our method is used for the analysis of proton transfer in crystalline imidazolium succinate and discusses the proton conductivity in terms of intermolecular proton transfer. This approach can be used to estimate proton transfer rate constants for large molecular systems, even when the calculation of the transition state is impossible.

Methanol Solvation Effect on the Proton Rearrangement of Curcumin’s Enol Forms: An Ab Initio Molecular Dynamics and Electronic Structure Viewpoint

The recognition of the solvent effect on the enol–enol tautomerism in curcumin can guide the rationalization of systems of chemical and biological interest. Although the phenomenon is widely studied, the nature of the proton rearrangement involving the explicit solvation remains an important issue. In this study, we describe the phenomenon by an ab initio approach in gas-phase and methanol solution. The mechanism involved in the proton rearrangement has been investigated by Car–Parrinello molecular dynamics and the static M062X/DFT method. The free-energy landscape and potential energy surface in the methanol environment were explored and compared with the gas-phase one. The energy profile in methanol medium shows asymmetrical proton distribution in the curcumin enol forms and, inversely, a symmetrical behavior in the gas phase. The Gilli π-delocalization index and the HOMO orbital shape show a slight decrease in the resonance-assisted hydrogen bond (RAHB) in the solvated enol forms, different from the gas-phase system. The thermal rate constant of the intramolecular proton transfer indicated that the tunneling effect plays an important role when the curcumin molecule is under the influence of methanol. These results suggest a criterion to characterize the symmetry of the potential energy profile for the intramolecular proton transfer.

Proton-Coupled Electron Transfer Reactions with Photometric Bases Reveal Free Energy Relationships for Proton Transfer.

The proton-coupled electron transfer (PCET) oxidation of p-aminophenol in acetonitrile was initiated via stopped-flow rapid-mixing and spectroscopically monitored. For oxidation by ferrocenium in the presence of 7-(dimethylamino)quinoline proton acceptors, both the electron transfer and proton transfer components could be optically monitored in the visible region; the decay of the ferrocenium absorbance is readily monitored (λmax = 620 nm), and the absorbance of the 2,4-substituted 7-(dimethylamino)quinoline derivatives (λmax = 370-392 nm) red-shifts substantially (ca. 70 nm) upon protonation. Spectral analysis revealed the reaction proceeds via a stepwise electron transfer-proton transfer process, and modeling of the kinetics traces monitoring the ferrocenium and quinolinium signals provided rate constants for elementary proton and electron transfer steps. As the pKa values of the conjugate acids of the 2,4-R-7-(dimethylamino)quinoline derivatives employed were readily tuned by varying the substituents at the 2- and 4-positions of the quinoline backbone, the driving force for proton transfer was systematically varied. Proton transfer rate constants (kPT,2 = (1.5-7.5) × 10(8) M(-1) s(-1), kPT,4 = (0.55-3.0) × 10(7) M(-1) s(-1)) were found to correlate with the pKa of the conjugate acid of the proton acceptor, in agreement with anticipated free energy relationships for proton transfer processes in PCET reactions.

Nonadiabatic rate constants for proton transfer and proton-coupled electron transfer reactions in solution: Effects of quadratic term in the vibronic coupling expansion.

Rate constant expressions for vibronically nonadiabatic proton transfer and proton-coupled electron transfer reactions are presented and analyzed. The regimes covered include electronically adiabatic and nonadiabatic reactions, as well as high-frequency and low-frequency proton donor-acceptor vibrational modes. These rate constants differ from previous rate constants derived with the cumulant expansion approach in that the logarithmic expansion of the vibronic coupling in terms of the proton donor-acceptor distance includes a quadratic as well as a linear term. The analysis illustrates that inclusion of this quadratic term in the framework of the cumulant expansion framework may significantly impact the rate constants at high temperatures for proton transfer interfaces with soft proton donor-acceptor modes that are associated with small force constants and weak hydrogen bonds. The effects of the quadratic term may also become significant in these regimes when using the vibronic coupling expansion in conjunction with a thermal averaging procedure for calculating the rate constant. In this case, however, the expansion of the coupling can be avoided entirely by calculating the couplings explicitly for the range of proton donor-acceptor distances sampled. The effects of the quadratic term for weak hydrogen-bonding systems are less significant for more physically realistic models that prevent the sampling of unphysical short proton donor-acceptor distances. Additionally, the rigorous relation between the cumulant expansion and thermal averaging approaches is clarified. In particular, the cumulant expansion rate constant includes effects from dynamical interference between the proton donor-acceptor and solvent motions and becomes equivalent to the thermally averaged rate constant when these dynamical effects are neglected. This analysis identifies the regimes in which each rate constant expression is valid and thus will be important for future applications to proton transfer and proton-coupled electron transfer in chemical and biological processes.

Photoprotolytic Processes of Umbelliferone and Proposed Function in Resistance to Fungal Infection.

The photoprotolytic processes of 7-hydroxy-coumarin (Umb) were investigated by steady-state and time-resolved-fluorescence techniques. We found that the Umb compound is a photoacid with pK(a)* ≈ 0.4 and a rate constant of the excited-state proton transfer (ESPT) to water of 2 × 10(10) s(-1). Umb is also a photobase and accepts an excess proton in solution and also directly from weak acids like acetic acid. When Umb is adsorbed on cellulose it also functions as a photoacid and a photobase. Hydroxycoumarins are known to accumulate next to fungal-, bacterial-, and viral-infected regions in the leaves and stems of plants in general and also in trees. We propose that these compounds when irradiated by sunlight UV, combat the fungi or bacteria by excited-state proton-transfer reactions. These photoprotolytic reactions provide a universal resistance mechanism to infections in plants.

Dihydrogen bond intermediated alcoholysis of dimethylamine-borane in nonaqueous media.

Dimethylamine-borane (DMAB) acid/base properties, its dihydrogen-bonded (DHB) complexes and proton transfer reaction in nonaqueous media were investigated both experimentally (IR, UV/vis, NMR, and X-ray) and theoretically (DFT, NBO, QTAIM, and NCI). The effects of DMAB concentration, solvents polarity and temperature on the degree of DMAB self-association are shown and the enthalpy of association is determined experimentally for the first time (-ΔH°assoc = 1.5-2.3 kcal/mol). The first case of "improper" (blue-shifting) NH···F hydrogen bonds was observed in fluorobenzene and perfluorobenzene solutions. It was shown that hydrogen-bonded complexes are the intermediates of proton transfer from alcohols and phenols to DMAB. The reaction mechanism was examined computationally taking into account the coordinating properties of the reaction media. The values of the rate constants of proton transfer from HFIP to DMAB in acetone were determined experimentally [(7.9 ± 0.1) × 10(-4) to (1.6 ± 0.1) × 10(-3) mol(-1)·s(-1)] at 270-310 K. Computed activation barrier of this reaction ΔG(‡theor)298K(acetone) = 23.8 kcal/mol is in good agreement with the experimental value of the activation free energy ΔG(‡exp)270K = 21.1 kcal/mol.

A DFT study of inter- and intramolecular proton transfer in 2-selenobarbituric acid tautomers

DFT studies were employed to study proton transfer in selenobarbituric acid tautomers in different environments including gas-phase, polarized continuum model (PCM) of solvent and solvent-assisted models. The calculations were performed using WB97XD, CAM-B3LYP and B3LYP methods with the AUG-CC-PVTZ and 6-311++G** basis sets. Among various tautomeric conversions (between ten tautomers), three systems have been selected to study their thermodynamic and kinetic behaviors via proton transfer. The gas-phase calculations showed that only 2-selenoxodihydropyrimidine-4,6(1H,5H)-dione is the major tautomer and the rates of converting this tautomer to the other tautomers are small (<2.73 × 10−14). Using PCM solvation model, the amount of other tautomers versus the major tautomer is increased but the rate constants for proton transfer are slightly decreased. In the solvent-assisted proton transfer, the concentration of the second tautomer (6-hydroxy-2-selenoxo-2,3 dihydropyrimidin-4(1H)-one) was increased to 5 % (in methanol) in comparison with the major tautomer. More importantly, the rate constants for the most of intermolecular proton transfer in solvent-assisted models were intensively increased. Calculated values showed that these processes could be done in solvent-assisted models and other minor tautomers (with different chemical and biological behaviors) could be observed in these systems.

Proton-coupled electron transfer in molecular electrocatalysis: theoretical methods and design principles.

Molecular electrocatalysts play an essential role in a wide range of energy conversion processes. The objective of electrocatalyst design is to maximize the turnover frequency and minimize the overpotential for the overall catalytic cycle. Typically, the catalytic cycle is dominated by key proton-coupled electron transfer (PCET) processes comprised of sequential or concerted electron and proton transfer steps. Theoretical methods have been developed to investigate the mechanisms, thermodynamics, and kinetics of PCET processes in electrocatalytic cycles. Electronic structure methods can be used to calculate the reduction potentials and pKa's and to generate thermodynamic schemes, free energy reaction pathways, and Pourbaix diagrams, which indicate the most stable species under certain conditions. These types of calculations have assisted in identifying the thermodynamically favorable mechanisms under specified experimental conditions, such as acid strength and overpotential. Such calculations have also revealed linear correlations among the thermodynamic properties, which can be used to predict the impact of modifying the ligands, substituents, or metal centers. The thermodynamic properties can be tuned with electron-withdrawing or electron-donating substituents. Ligand modification can exploit the role of noninnocent ligands. For example, ligand protonation typically decreases the overpotential. Calculations of rate constants for electron and proton transfer, as well as concerted PCET, have assisted in identifying the kinetically favorable mechanisms under specified conditions. The concerted PCET mechanism is thought to lower the overpotential required for catalysis by avoiding high-energy intermediates. Rate constant calculations have revealed that the concerted mechanism involving intramolecular proton transfer will be favored by designing more flexible ligands that facilitate the proton donor-acceptor motion while also maintaining a sufficiently short equilibrium proton donor-acceptor distance. Overall, theoretical methods have assisted in the interpretation of experimental data and the design of more effective molecular electrocatalysts.

Proton transfer and complex formation of angiotensin I ions with gaseous molecules at various temperature

Proton transfer reactions of angiotensin I ions for +2 charge state, [M+2H]2+, to primary, secondary and aromatic amines were examined in the gas phase. Absolute reaction rate constants for proton transfer were determined from intensities of parent and product ions in the mass spectra. Temperature dependence of the reaction rate constants was measured. Remarkable change was observed for distribution of product ions and reaction rate constants. Proton transfer reaction was enhanced or reduced by complex formation of [M+2H]2+ with gaseous molecules. The results relate to conformation changes of [M+2H]2+ with change of temperature, which are induced by complex formation and or by thermal collision with He. Proton transfer reactions of angiotensin I ions for +3 charge state, [M+3H]3+, were also studied. The reaction rates did not depend on temperature so definitely.