In artificial membrane systems we want to study the structure and function of proteins as they would behave in their natural environment, so they can be used in applications that require an ex vivo approach. For instance, proteins are increasingly used in FET biosensors, thin-film protein arrays, or bio-fuel cells. These applications require a controlled protein orientation after immobilization onto varying surfaces. When two orientations are present in a system, the average functionality may not always be sufficient to acquire a signal. However, an anisotropic orientation can lead to homogeneity in transport direction and therefore increase signal response. Our objective was to determine whether the surface charge on a liposome plays a key role in determining transmembrane protein orientation and functionality during formation of proteoliposomes. To study this, we reconstitute a model ion pump, proteorhodopsin, in liposomes of opposite charges and varying charge densities and observe the resultant protein orientation. We used four different assays to study the electrostatic protein-surface interactions and light-driven ion transport in proteoliposomes. The surface treatments and proteolysis of proteoliposomes showed physical evidence of preferential orientation, while functional assays provided evidence of vectorial ion transport. We show that the manipulation of lipid composition can control orientation of protein in liposomes. This technique opens up a simple route for controlling protein orientation in many applications ranging from solution vesicle assays to complex bioelectronic devices and sensors that use membrane proteins.