In the chemical and biochemical manufacturing industry, the recovery and purification of organic species are amongst the most energy-demanding steps, due to the complexity of product streams, involving unreacted reactants, byproducts, inorganic salts along with the final products.1, 2 Membrane-integrated electrochemical methods have garnered interest as promising candidates for selective recovery of organic molecules, such as whey protein from cheese whey waste.3 Nonetheless, they still encounter a bottleneck in discriminating among charged species, primarily due to the lack of intrinsic ion selectivity on the ion-exchange membrane.1, 4 Here, we demonstrate a layer-by-layer (LBL) functionalization method to control the membrane selectivity, enabling the recovery of organic acids from a multicomponent mixture within a redox-mediated electrodialysis platform. Tailoring the physicochemical properties of ion-exchange membranes through LBL approach enables complete retention of succinate, while enhancing the overall flux for inorganic ions.1 This remarkable retention capability of the LBL membrane extends to mono- (pyruvate) and multivalent organic acids (succinate and citrate), highlighting the robustness of LBL membrane in recovering various organic species, regardless of their charges. Integration of functionalized membrane into the redox-mediated ED system facilitates the continuous enrichment of succinate with high energy efficiency and membrane stability compared to conventional electrodialysis system. Furthermore, we demonstrate continuous up-concentration of succinate in tandem with the partitioning of unreacted sugar and inorganic ions, paving the way for modular multicomponent separations in biomanufacturing processes.