Promising Carbon Source Research Articles

Environmentally Friendly Biological Activated Carbon Derived from Sugarcane Waste as a Promising Carbon Source for Efficient and Robust Rechargeable Zinc–Air Battery

China is one of the largest sugarcane industrial countries in the world, and the annual output of bagasse waste is abundant. Classical incineration, landfill, and other treatment methods are inefficient and seriously harmful to the environment, so it is urgent to develop a new comprehensive utilization of agricultural waste. In this work, the sugarcane waste residue is converted to biological activated carbon (BAC) through a simple pre-carbonization and KOH activation process, which is then mixed with perovskite oxide BaCo0.5Fe0.5O3−δ (BCF) to form BAC/BCF composite air electrode. BAC/BCF assembled rechargeable zinc–air battery (ZAB) exhibits a relatively good output maximum power density of 96 mW·cm−2 and considerable long-term charge–discharge cycle stability over 250 h operation. These results indicate that the BAC derived from sugarcane waste is a promising potential carbon material candidate for ZAB application, which can realize the high-value utilization of agricultural waste in the field of efficient and durable energy storage and conversion devices.

Optimized genome-wide CRISPR screening enables rapid engineering of growth-based phenotypes in Yarrowia lipolytica

CRISPR-Cas9 functional genomic screens uncover gene targets linked to various phenotypes for metabolic engineering with remarkable efficiency. However, these genome-wide screens face a number of design challenges, including variable guide RNA activity, ensuring sufficient genome coverage, and maintaining high transformation efficiencies to ensure full library representation. These challenges are prevalent in non-conventional yeast, many of which exhibit traits that are well suited to metabolic engineering and bioprocessing. To address these hurdles in the oleaginous yeast Yarrowia lipolytica, we designed a compact, high-activity genome-wide sgRNA library. The library was designed using DeepGuide, a sgRNA activity prediction algorithm and a large dataset of ∼50,000 sgRNAs with known activity. Three guides per gene enables redundant targeting of 98.8% of genes in the genome in a library of 23,900 sgRNAs. We deployed the optimized library to uncover genes essential to the tolerance of acetate, a promising alternative carbon source, and various hydrocarbons present in many waste streams. Our screens yielded several gene knockouts that improve acetate tolerance on their own and as double knockouts in media containing acetate as the sole carbon source. Analysis of the hydrocarbon screens revealed genes related to fatty acid and alkane metabolism in Y. lipolytica. The optimized CRISPR gRNA library and its successful use in Y. lipolytica led to the discovery of alternative carbon source-related genes and provides a workflow for creating high-activity, compact genome-wide libraries for strain engineering.

Resolving the metabolism of monolignols and other lignin-related aromatic compounds in Xanthomonas citri

Lignin, a major plant cell wall component, has an important role in plant-defense mechanisms against pathogens and is a promising renewable carbon source to produce bio-based chemicals. However, our understanding of microbial metabolism is incomplete regarding certain lignin-related compounds like p-coumaryl and sinapyl alcohols. Here, we reveal peripheral pathways for the catabolism of the three main lignin precursors (p-coumaryl, coniferyl, and sinapyl alcohols) in the plant pathogen Xanthomonas citri. Our study demonstrates all the necessary enzymatic steps for funneling these monolignols into the tricarboxylic acid cycle, concurrently uncovering aryl aldehyde reductases that likely protect the pathogen from aldehydes toxicity. It also shows that lignin-related aromatic compounds activate transcriptional responses related to chemotaxis and flagellar-dependent motility, which might play an important role during plant infection. Together our findings provide foundational knowledge to support biotechnological advances for both plant diseases treatments and conversion of lignin-derived compounds into bio-based chemicals.

Synthetic redesign of Escherichia coli W for faster metabolism of sugarcane molasses

BackgroundSugarcane molasses, rich in sucrose, glucose, and fructose, offers a promising carbon source for industrial fermentation due to its abundance and low cost. However, challenges arise from the simultaneous utilization of multiple sugars and carbon catabolite repression (CCR). Despite its nutritional content, sucrose metabolism in Escherichia coli, except for W strain, remains poorly understood, hindering its use in microbial fermentation. In this study, E. coli W was engineered to enhance sugar consumption rates and overcome CCR. This was achieved through the integration of a synthetically designed csc operon and the optimization of glucose and fructose co-utilization pathways. These advancements facilitate efficient utilization of sugarcane molasses for the production of 3-hydroxypropionic acid (3-HP), contributing to sustainable biochemical production processes.ResultsIn this study, we addressed challenges associated with sugar metabolism in E. coli W, focusing on enhancing sucrose consumption and improving glucose-fructose co-utilization. Through targeted engineering of the sucrose utilization system, we achieved accelerated sucrose consumption rates by modulating the expression of the csc operon components, cscB, cscK, cscA, and cscR. Our findings revealed that monocistronic expression of the csc genes with the deletion of cscR, led to optimal sucrose utilization without significant growth burden. Furthermore, we successfully alleviated fructose catabolite repression by modulating the binding dynamics of FruR with the fructose PTS regulon, enabling near-equivalent co-utilization of glucose and fructose. To validate the industrial applicability of our engineered strain, we pursued 3-HP production from sugarcane molasses. By integrating heterologous genes and optimizing metabolic pathways, we achieved improvements in 3-HP titers compared to previous studies. Additionally, glyceraldehyde-3-phosphate dehydrogenase (gapA) repression aids in carbon flux redistribution, enhancing molasses conversion to 3-HP.ConclusionsDespite limitations in sucrose metabolism, the redesigned E. coli W strain, adept at utilizing sugarcane molasses, is a valuable asset for industrial fermentation. Its synthetic csc operon enhances sucrose consumption, while mitigating CCR improves glucose-fructose co-utilization. These enhancements, coupled with repression of gapA, aim to efficiently convert sugarcane molasses into 3-HP, addressing limitations in sucrose and fructose metabolism for industrial applications.

Investigating the Potential of Grass Biomass (Thysanolaena latifolia) as an Alternative Feedstock for Sugar Platforms and Bioethanol Production

Bioethanol, a lignocellulosic biofuel, has increased energy sustainability and lessened the environmental effects associated with energy production. Thysanolaena latifolia is a common weed found in the northern part of Thailand that is considered non-food biomass, with a high biomass productivity of approximately 10.2 kg/year. Here, we evaluated the potential of T. latifolia biomass as an environmentally friendly material source for producing alternative bioethanol. To this end, we treated the feedstock under mild conditions using various concentrations of phosphoric acid to create ideal conditions for enzymatic hydrolysis. Pretreatment with 75% phosphoric acid yielded the highest solid recovery (55.8 ± 0.6%) and glucans (93.0 ± 0.3%). Additionally, the hydrolysis efficiency and glucose yield of treated biomass were significantly improved. As a result, the liquid hydrolysate from T. latifolia used for ethanol fermentation by Saccharomyces cerevisiae TISTR 5339 generated 8.9 ± 0.0 g/L ethanol. These findings demonstrate that glucose derived from liquid hydrolysate is a promising sustainable carbon source for producing ethanol from T. latifolia feedstock. Thus, using T. latifolia as a feedstock for generating ethanol can improve the efficiency of bioenergy production.

Graphene oxide synthesis from coconut fiber powder using triple superphosphate catalyst and its potency for secondary battery electrode

Coconut fiber, considered an organic waste, emerges as a promising alternative carbon source for graphene oxide production—a material characterized by its conductive nature due to oxidation and the introduction of functional groups. The synthesis process involves carbonization with varied holding times (10, 20, and 30 minutes) and the utilization of Triple Superphosphate (TSP) and Ferrocene catalysts at concentrations of 10 wt.% and 20 wt.%. Subsequently, the sonication method is employed to enhance the electrical conductivity of graphene oxide post-carbonization. Notably, the electrical conductivity tests, conducted using a sourcemeter, revealed the optimum performance at 20 minutes of carbonization duration and a 20 wt.% TSP catalyst concentration, yielding an impressive electrical conductivity of 11,489.86 S/m. These findings underscore the significance of tailored parameters in optimizing graphene oxide synthesis for applications such as high-conductivity battery anodes.

Start-up of glycerol-driven denitrifying phosphorus removal from wastewater: The effects of the microaerobic environment

Glycerol, an abundant by-product of biodiesel production, represented a promising carbon source for enhancing nutrient removal from low C/N ratio wastewater. This study discovered a novel approach to initiate glycerol-driven denitrifying phosphorus removal (DPR) in situ by creating a short-term microaerobic environment within the aerobic zone. This approach facilitated the in-situ conversion of glycerol, which was subsequently utilized by denitrifying phosphate accumulating organisms (DPAOs) for DPR. The feasibility and stability of glycerol-driven DPR were validated in a continuous-flow pilot-scale reactor. Anaerobic phosphorus release increased from 1.0 mg/L/h to 2.5 mg/L/h, with fermentation bacteria and related functional genes showing significant increases. The stable stage exhibited 92.8% phosphorus removal efficiency and 55.5% DPR percentage. The microaerobic environment enhanced fermentation bacteria enrichment, crucial for glycerol-driven DPR stability. The collaborative interaction between fermentation bacteria and phosphate accumulating organisms (PAOs) played a key role in sustaining glycerol-driven DPR stability. These findings provide a robust theoretical foundation for applying glycerol-driven DPR in established wastewater treatment plants.

Microorganism-mediated denitrogenation of aquaculture systems provoked by poly-β-hydroxybutyrate (PHB)

The biodegradable polymer poly-β-hydroxybutyrate (PHB) is a promising carbon source for biological mitigation of nitrogen pollution, a significant problem in aquaculture that physical and chemical methods have not provided a comprehensive solution. Here we investigated the impact of PHB on the zero-water-change largemouth bass culture by 30- and 40-day experiments. PHB loaded into the filter circulation pump at 4 g L−1, optimum value determined by the first experiment, significantly reduced the levels of nitrate by 99.65%, nitrite by 95.96%, and total nitrogen by 85.22% compared to the control without PHB. PHB also significantly increased denitrifying bacteria (e.g., Proteobacteria and Fusobacteria) and expression of denitrification genes (e.g., nirK and nirS) in the microbial community, improving growth and health parameters of largemouth bass. While the impact may vary in other culture systems, PHB thus demonstrated its remarkable utility in aquaculture, highlighting ecological assessment and application to larger aquaculture operations as future considerations.

Mixotrophic denitrification of waste activated sludge fermentation liquid as an alternative carbon source for nitrogen removal: Reducing N2O emissions and costs

Heterotrophic-sulfur autotrophic denitrification (HAD) has been proposed to be a prospective nitrogen removal process. In this work, the potential of fermentation liquid (FL) from waste-activated sludge (WAS) as the electron donor for denitrification in the HAD system was explored and compared with other conventional carbon sources. Results showed that when FL was used as a carbon source, over 99% of NO3−-N was removed and its removal rate exceeded 14.00 mg N/g MLSS/h, which was significantly higher than that of methanol and propionic acid. The produced sulfate was below the limit value and the emission of N2O was low (1.38% of the NO3−-N). Microbial community analysis showed that autotrophic denitrifiers were predominated in the HAD system, in which Thiobacillus (16.4%) was the dominant genus. The economic analysis showed the cost of the FL was 0.062 €/m3, which was 30% lower than that in the group dosed with methanol. Our results demonstrated the FL was a promising carbon source for the HAD system, which could reduce carbon emission and cost, and offer a creative approach for waste-activated sludge resource reuse.

Use of acetate as substrate for sustainable production of homoserine and threonine by Escherichia coli W3110: A modular metabolic engineering approach

Acetate, a promising yet underutilized carbon source for biological production, was explored for the efficient production of homoserine and threonine in Escherichia coli W. A modular metabolic engineering approach revealed the crucial roles of both acetate assimilation pathways (AckA/Pta and Acs), optimized TCA cycle flux and glyoxylate shunt activity, and enhanced CoA availability, mediated by increased pantothenate kinase activity, for efficient homoserine production. The engineered strain W–H22/pM2/pR1P exhibited a high acetate assimilation rate (5.47 mmol/g cell/h) and produced 44.1 g/L homoserine in 52 h with a 53% theoretical yield (0.18 mol/mol) in fed-batch fermentation. Similarly, strain W–H31/pM2/pR1P achieved 45.8 g/L threonine in 52 h with a 65% yield (0.22 mol/mol). These results represent the highest reported levels of amino acid production using acetate, highlighting its potential as a valuable and sustainable feedstock for biomanufacturing.

From sustainable feedstocks to microbial foods.

Climate change-induced alterations in weather patterns, such as frequent and severe heatwaves, cold waves, droughts, floods, heavy rain and storms, are reducing crop yields and agricultural productivity. At the same time, greenhouse gases arising from food production and supply account for almost 30% of anthropogenic emissions. This vicious circle is producing a global food crisis. Sustainable food resources and production systems are needed now, and microbial foods are one possible solution. In this Perspective, we highlight the most promising technologies, and carbon and energy sources, for microbial food production.

Insight into performance of nitrogen removal enhanced by adding lactic acid-rich food waste fermentation liquid as carbon source in municipal wastewater treatment

Lactic acid-rich fermentation liquid (LAFL) of food waste is found to act as a promising alternative carbon source for nitrogen removal in wastewater treatment. Here, LAFL was employed to investigate its impacts on nitrogen removal during raw municipal wastewater treatment with a comparison to sodium acetate (NaAc). Results indicated that nitrogen removals were comparable when incorporated with LAFL and NaAc (92.89 % v.s. 91.23 %). Unlike the utilization of NaAc, using LAFL could avoid suppressing the relative abundance of the nitrification genes and thus pose a negative risk to nitrogen removal during prolonged operation. The introduction of LAFL increased the stability and robustness of the functional microbial community and effectively reduced excess activated sludge (AS) generation by 109 % compared to NaAc addition, consequently enhancing nitrogen removal but diminishing the treatment cost. In general, LAFL exhibits prospective engineering application potentials and economic advantages in improving nitrogen removal by AS process.

Enabling Wasted A4 Papers as a Promising Carbon Source to Construct Partially Graphitic Hierarchical Porous Carbon for High-Performance Aqueous Zn-Ion Storage.

Considering the superiorities of abundance, easy collection, low cost, and nearly constant composition, the wasted A4 papers are deemed as a recyclable and scalable carbon source to fabricate functional carbon materials for Zn-ion hybrid supercapacitors (ZIHSCs), which integrate the supercapacitors' high-power output and batteries' high energy density. Herein, the wasted A4 papers are efficiently converted into an advanced carbon material owning a hierarchical porous structure with a high surface area and interconnected multiscale channels, a graphitic structure, and a good level of N/O codoping. By taking advantage of these features, an express electron/ion transfer pathway, a large accessible surface interface, and a robust architecture are achieved for swift kinetics, numerous active sites, and excellent steadiness to afford a charming Zn2+ storage capability for the aqueous coin-type ZIHSC device (a high capacity of 244 mAh g-1 at 0.1 A g-1 with a capacity conservation of 116.4 mAh g-1 even amplifying the current density by 200 times, a supreme energy density of 190.4 Wh kg-1, a supreme power output of 18 kW kg-1, and an eminent durability of 93.8% over 10,000 cycles at 10 A g-1). Excitingly, the quasi-solid ZIHSC device also bespeaks an enjoyable capacity of 211.7 mAh g-1, a high energy density of 159.3 Wh kg-1, good mechanical flexibility, and a low self-discharge rate. This work puts forward a simple and scalable strategy to enable the wasted A4 paper as a competitive carbon source to construct advanced cathode material for Zn2+ storage.

Engineering and transcriptome study of Saccharomyces cerevisiae to produce ginsenoside compound K by glycerol.

Synthetic biology-based engineering of Saccharomyces cerevisiae to produce terpenoid natural products is an effective strategy for their industrial application. Previously, we observed that glycerol addition was beneficial for ginsenoside compound K (CK) production in a S. cerevisiae when it was fermented using the YPD medium. Here, we reconstructed the CK synthesis and glycerol catabolic pathway in a high-yield protopanaxadiol (PPD) S. cerevisiae strain. Remarkably, our engineered strain exhibited the ability to utilize glycerol as the sole carbon source, resulting in a significantly enhanced production of 433.1±8.3mg L-1 of CK, which was 2.4 times higher compared to that obtained in glucose medium. Transcriptomic analysis revealed that the transcript levels of several key genes involved in the mevalonate (MVA) pathway and the uridine diphosphate glucose (UDPG) synthesis pathway were up-regulated in response to glycerol. The addition of glycerol enhanced CK titers by augmenting the flux of the terpene synthesis pathway and facilitating the production of glycosyl donors. These results suggest that glycerol is a promising carbon source in S. cerevisiae, especially for the production of triterpenoid saponins.

Poly (vinyl alcohol) based carbon nanofibers as freestanding anodes for lithium‐ion batteries

AbstractIn this study, we investigated the iodination process for the preparation of water‐soluble polyvinyl alcohol (PVA)‐based carbon nanofibers (CNFs) and their electrochemical properties. Iodinated nanofibers were carbonized at different temperatures (600°C, 800°C) under an argon (Ar) atmosphere. Morphology and physical properties of fiber mats were characterized by scanning electron microscopy (SEM), Fourier transform infrared spectroscopy (FTIR), Raman spectroscopy, and thermogravimetric analysis (TGA), while electrical conductivity measurements were done using four probes. As a freestanding anode in half‐cell lithium batteries, the CNFs were prepared by electrospinning of PVA and PVA–CNT blend, which was exposed to iodine vapor at various temperatures (60, 80, and 100°C). Iodine vapor treatment at 80°C and subsequent carbonization at 800°C provided a 29% carbon yield. The resulting CNT‐containing optimized CNFs exhibited superior flexibility, electrical conductivity (2.16 S/cm), and handleability, making them a promising, binder‐free environmentally friendly carbon source for lithium‐ion batteries with high capacity (672 mAh/g at 50 mA/g). The study clearly showed that PVA might be an alternative precursor for the production of carbon micro‐ and nanofibers.Highlights Anodic performance of PVA‐based carbon nanofibers was analyzed. PVA precursor offers economic and environmental option for binder‐free electrodes. PVA–CNT composite nanofibers with optimized iodination and carbonization time identified as a promising high carbon yield carbon source for lithium‐ion batteries. CNT‐containing optimized carbon nanofibers exhibited superior flexibility and electrical conductivity (2.16 S/cm). Freestanding fiber anodes exhibited a higher capacity of 672 mAh/g, at 50 mA/g compared to conventional graphite anode (372 mAh/g).

Bioconversion of waste glycerol into viscosinamide by Pseudomonas fluorescens DR54 and its activity evaluation

Lipopeptides, derived from microorganisms, are promising surface-active compounds known as biosurfactants. However, the high production costs of biosurfactants, associated with expensive culture media and purification processes, limit widespread industrial application. To enhance the sustainability of biosurfactant production, researchers have explored cost-effective substrates. In this study, crude glycerol was evaluated as a promising and economical carbon source in viscosinamide production by Pseudomonas fluorescens DR54. Optimization studies using the Box − Behnken design and response surface methodology were performed. Optimal conditions for viscosinamide production including glycerol 70.8 g/L, leucine 2.7 g/L, phosphate 3.7 g/L, and urea 9.3 g/L were identified. Yield of viscosinamide production, performed under optimal conditions, reached 7.18 ± 0.17 g/L. Preliminary characterization of viscosinamide involved the measurement of surface tension. The critical micelle concentration of lipopeptide was determined to be 5 mg/L. Furthermore, the interactions between the viscosinamide and lipase from Candida rugosa (CRL) were investigated by evaluating the impact of viscosinamide on lipase activity and measuring circular dichroism. It was observed that the α-helicity of CRL increases with increasing viscosinamide concentration, while the random coil structure decreases.

Synergistic effects of hierarchical porous structures and ultra-high pyridine nitrogen doping enhance the oxygen reduction reaction electrocatalytic performance of metal-free laminated lignin-based carbon

Construction of non-metallic biomass-carbon based catalysts for fuel cell air cathode applications has attracted great attention in recent years. In this work, a convenient and clean technique was developed to fabrication nitrogen-doped lignin-based hierarchical porous lamellar carbon (N-LHPC) via lignin as the carbon precursor, melamine/urea as the nitrogen source and ZnC2O4.2H2O as the chemical activator. The N-LHPC has a high specific surface area (491.5 m2 g−1) and macroporous/mesoporous/microporous structures. The nitrogen doping of N-LHPC can reach 16.37 wt%, with a high pyridinic nitrogen content of 41.39 at.%. N-LHPC exhibits a high half-wave potential (0.87 V) and a large limiting current density (5.75 mA cm−2) in 0.1 mol KOH media which is comparable to the commercial Pt/C catalysts. Furthermore, N-LHPC was assembled as air cathode catalyst for Zn-air batteries to evaluate its practical catalytic performance, and the power density was as high as 191 mW cm−2, which was superior to the 20 wt% Pt/C electrocatalyst. This research demonstrates that lignin is a promising carbon source for the fabrication of high catalytic activity and economical electrocatalysts for energy storage systems.

Unraveling the role of alkali metal in the biochar for enhancing the chemical looping ammonia generation efficiency

Chemical looping ammonia generation (CLAG), efficiently converting C-based material, N2 and H2O into NH3 and CO, is considered to be one of the promising NH3 production technologies. Using biochar as the C-based material is supposed to further improve the “green” level of NH3 but there is rare report about that. This paper was desired to fill this gap. Peanut shell biochar, lotus shell biochar and corncob biochar were used to study the chemical looping ammonia generation performances of the N-support. It was found that metals contained in the biochar significantly affected the nitridation process; alkali metals were simulative while alkaline-earth metals were inhibitory, which indicated that the corncob biochar exhibit the best nitriding properties. In addition, K, with the best positive effect for nitridation, was found to be with negligible negative effect for ammoniation. Furthermore, the carbon conversion efficiency and NH3 production could be still improved by 8.46 % and 9.23 % if the corncob biochar was modified with 2 wt% K (simulating 120 cycles of nitridation/ammoniation reaction). The obtained results indicated that the biochar is a promising carbon source for CLAG.

Exploring pineapple peel hydrolysate as a sustainable carbon source for xylitol production

This study explores utilizing pineapple peel (PP) hydrolysate as a promising carbon source for xylitol production, covering scopes from the pre-treatment to the fermentation process. The highest xylose concentration achieved was around 20 g/L via mild acid hydrolysis (5% nitric acid, 105 °C, 20-min residence time) with a solid loading of 10%. Two sets fermentability experiments were carried out of varying pH levels in synthetic media that includes acetic acid as the main inhibitors and hydrolysate supplemented with diverse nitrogen source. The results revealed that pH 7 exhibited the highest xylitol production, yielding 0.35 g/g. Furthermore, urea was found to be a highly promising and cost-effective substitute for yeast extract, as it yielded a comparable xylitol production of 0.31 g/g with marginal difference of only 0.01 g/g compared to yeast extract further highlights the viability of urea as the preferred option for reducing xylitol production cost. The absence of a significant difference between the synthetic media and hydrolysate, with only a marginal variance of 0.35 to 0.32 g/g, implies that acetic acid is indeed the primary constraint in xylitol production using PP hydrolysate. The study sheds light on PP biomass's potential for xylitol production, aligning economic benefits with environmental sustainability and waste management.

Selective screening Lactobacillus spp. against Escherichia coli and Salmonella Typhimurium and optimizing a cane molasses-based medium with Lactobacillus acidophilus as a guiding model

BackgroundThe overuse of antibiotics in livestock farming has led to the emergence of antibiotic resistance, which poses a significant threat to human health. Probiotics have gained increasing popularity as an alternative to antibiotics, prompting the exploration of cost-effective fermentation substrates for large-scale production. MethodsThis work aimed to investigate the antimicrobial effect of probiotics lactic acid bacteria (LAB) against various pathogenic bacterial strains (e.g. S. Typhimurium O66, S. Typhimurium S251, E. coli O78:K80 and E. coli O157:H7). A total of 28 bacterial isolates were obtained from fermented food sources, in conjunction with 12 identified LAB strains, were screened for antimicrobial activity using microdilution broth method. The chosen probiotic strain, Lactobacillus acidophilus, was subsequently cultivated in a medium formulated with cane molasses to assess its suitability for probiotic production. Significant findingsThe results demonstrated that most LAB strains inhibited S. Typhimurium and E. coli by over 90 %. In the optimized cane molasses-based medium containing 16.02 % (v/v) molasses, 10 g/L (w/v) yeast extract with pH of 6.6, a cell dry weight (CDW) of 3.63 g/L of L. acidophilus was achieved. Therefore, cane molasses emerged as a promising alternative carbon source for LAB biomass production, offering the potential to reduce production costs while minimizing waste generation.