As an important capital city of intensive urbanization and industrialization in Northeast China, Changchun has experienced extremely rapid development, with diverse sectors such as automobile manufacturing, equipment manufacturing, optoelectronics, and pharmaceutical decoration. However, data on the levels and profiles of perfluoroalkyl substances (PFASs) in urban soils of Changchun is limited. This study investigated 17 PFASs across various functional zones within the main urban area of Changchun. ∑PFAS concentrations in the soils ranged from 0.236 to 6.483 ng/g, averaging 1.820 ng/g. Perfluorocarboxylic acids (PFCAs) were more prevalent than perfluorosulfonic acids (PFSAs), and short-chain PFASs (C ≤ 6) were the predominant residues. PFAS concentrations varied across functional zones, with commercial markets exhibiting the highest levels, followed by industrial areas, residential areas, suburban zones, and transportation areas. Molecular diagnostic ratio and PCA-MLR analysis identified industrial production processes of consumer goods and wastewater treatment plants as the primary sources of soil PFAS contamination. There were no obvious health risks of soil ∑PFASs, while soil PFOS and PFHxS may have an impact on the richness and diversity of soil microbial communities in some certain locations. This study provides new data on PFAS residues in soils influenced by diverse contamination sources within a key industrial city in Northeast China, offering valuable insights for prioritizing remediation and restoration efforts.