Primary Host Research Articles

Comparative pathogenesis of Ethiopia/Habru/2014 Lineage-IV peste des petits ruminants virus in goats and cattle

BackgroundPeste des Petits Ruminants (PPR) is a highly contagious viral disease primarily affecting goats and sheep, with clinical manifestations ranging from peracute disease to subclinical infection, particularly in atypical hosts such as cattle. The role of atypical hosts such as cattle to the spread of PPR remains controversial, with conflicting reports in the literature. Despite its worldwide significance, considerable knowledge gaps exist regarding the pathogenesis and clinical progression in both primary and atypical hosts. This study aimed to elucidate the tissue tropism, pathogenesis, virus shedding, clinical progression, and pathology associated with experimental PPR virus infection in indigenous goats and cattle. To this end, 32 animals—16 goats and 16 cattle—were intranasally inoculated with the Ethiopia/Habru/2014 Lineage-IV strain of the PPR virus followed by detailed clinical evaluations and systematic sampling at pre-established intervals to assess serological conversion, viral shedding, and the pathogenesis of the infection across both species.ResultsThe results show that goats exhibited typical clinical signs 4 days post-inoculation, with seroconversion by day 6 and early detection of viral RNA in swabs and tissues by day 3 and virus isolation starting day 4. In contrast, cattle exhibited minimal clinical signs, with seroconversion occurring at day 8 with viral RNA detected in tissue samples at day 4 and virus isolation starting day 6 in tissues and in a single nasal swab at day 8. Clinical scores and tissue positivity rates significantly differed between goats and cattle (P = 0.007 and P < 0.001, respectively). While goats exhibited expected gross and histopathological lesions, cattle showed only nonspecific lesions.ConclusionsTogether, our findings highlight the importance of comparative pathology studies for better understanding virus dynamics and transmission pathways that may help inform more effective PPR control programs. Future research should explore the pathogenesis of different PPRV lineages in cattle, assessing variations in disease progression and potential for epidemiological impact.

Multi-gene analysis of the Russula crown clade (Russulales, Basidiomycota) revealed six new species and Alboflavinae subsect. nov. from Fagaceae forests in China.

The crown clade is one of two major groups in the Russula subg. Russula. An analysis of Chinese samples was performed based on the morphology, internal transcribed spacer (ITS) sequences, and multi-gene phylogenies of 28S nrLSU, 16S mtSSU, rpb1, rpb2, and tef1-α. The results supported the independence of six new species: Russula alboflava (sect. Amethystinae), R. chrysantha (subsect. Chamaeleontinae), R. liyui (subsect. Laricinae), R. lutescens (subsect. Olivaceinae), R. paraxerampelina, and R. prunicolor (subsect. Xerampelinae) from Fagaceae forest habitats. Subsect. Alboflavinae was newly proposed in sect. Amethystinae. Members of the new subsection include R. alboflava, R. burlinghamiae, and possibly R. ballouii. Our analyses also supported the claim that two species of R. fulvograminea (subsect. Laricinae) and R. subrubens (subsect. Xerampelinae) have a Eurasian distribution. The habitat and primary hosts of the main phylogenetic clades within related subsections were summarized and discussed.

Antibiotic resistomes and ecological risk elimination in field-scale constructed wetland revealed by integrated metagenomics and metatranscriptomics

Constructed wetlands (CWs) are identified as significant ecological systems for the potential control of antibiotic resistance genes (ARGs) in the environment. However, the precise mechanisms governing removal, persistence, expression, and associated risks of ARGs during wetland treatment remain poorly understood. In this study, the distribution, mobility, expression, and hosts of ARGs in water, sediments, and plants of a field-scale CW and its parallel natural river were systematically investigated through metagenomic and metatranscriptomic approaches. Results showed that both the abundance and diversity of ARGs in water gradually decreased along the way of CW, reaching a final abundance removal rate of 72.28 % in the effluent. Source tracking analysis indicted that the reduction of ARGs in water was mainly achieved by the dynamic accumulation of ARGs in sediments and plants of the CW. Proteobacteria were identified as primary hosts for ARGs, particularly in sediments and plants during CW treatment. Moreover, although ESKAPE pathogens carrying multiple ARGs persisted in all media throughout the CW treatment, ARG expression levels and risk of water were also significantly decreased after CW treatment. Collectively, our comprehensive multi-omics study would enhance the understanding of ARG removal by CWs, offering insights for controlling antimicrobial resistance in wastewater treatment system.

Proteomics fingerprinting reveals importance of iron and oxidative stress in Streptomyces scabies-Solanum tuberosum interactions.

The Gram-positive actinobacterium Streptomyces scabies is the major causal agent of potato common scab. The main pathogenicity factor is thaxtomin A, a phytotoxin that causes atypical cell death, although other secondary metabolites have been described to play a role in S. scabies virulence. Despite this, many aspects of the interaction between S. scabies and its primary host Solanum tuberosum L. remain to be elucidated. Intracellular proteins of S. scabies EF-35 grown in the presence of in vitro produced tubers (microtubers) of the Russet Burbank and Yukon Gold potato cultivars were extracted and analysed by electrospray mass spectrometry (ES MS/MS). Based on the results of proteomic analysis, iron quantification by ICP-MS and nitrite quantification using Griess reagent in growth media as well as RT-qPCR analysis of the siderophore pyochelin gene expression were performed in the presence and absence of microtubers. Hydrogen peroxide accumulation was also determined in the nutrient medium used for co-cultivation of bacteria and potato microtubers. Potato microtubers caused an increase in the content of bacterial proteins involved in stress and defense, secondary metabolism, and cell differentiation, as well as secreted proteins. Co-cultivation with potato microtubers induced the accumulation of S. scabies proteins implicated in siderophore pyochelin biosynthesis, nitrite production and oxidative stress perception and response. The increase in the abundance of proteins related to pyochelin biosynthesis was consistent with a significant decrease in the iron content in the culture medium, as well as with induction of expression of pyochelin biosynthesis genes. Elevated nitrite/sulfite reductase protein levels were associated with increased nitrite excretion by S. scabies cells in the presence of host microtubers. The increase in the levels of proteins associated with signaling and oxidative stress response could have been caused by the accumulation of ROS, in particular hydrogen peroxide, detected in the studied system. These findings show that interactions of S. scabies with living potato microtubers induce the production of secondary metabolites, defense responses, and protection from oxidative stress. This study suggests the importance of iron during host - S. scabies interactions, resulting in competition between pathogen and its host.

Tetrahedrite-(Hg) from the Litija deposit, Central Slovenia: Mineral chemistry insights into fluid evolution processes

For over a century, the main carrier of Silver in the Litija mineralisation has been debated, with fine-grained galena often identified as the primary host. The in-situ quantitative microanalysis of a silver-bearing ore from the Alma orebody reveals that silver is not hosted within the galena but occurs instead as inclusions within tetrahedrite-(Hg). The mechanism of silver incorporation in tetrahedrite is complex and may occur through atom-to-atom substitution, where monovalent silver replaces monovalent copper (Ag+ ↔ Cu+). Additionally, silver can be present as a separate phase, either as nanoscale inclusions of acanthite or through the replacement of pre-existing silver-rich chalcopyrite. Elemental correlations and minor variations in the element distribution within the studied tetrahedrite provide insights into the chemistry of the mineralizing fluid. These findings suggest an initial reducing, near-neutral, low-chlorinity fluid promoting incorporation of Sb3+ and Hg2+ into tetrahedrite. This fluid subsequently mixed with high-salinity, Cl-rich, near-neutral fluid transporting Zn2+. Sulfide precipitation introduced additional acidity in the mixed fluids, altering the pH and promoting As3+ and Zn2+ incorporation into tetrahedrite. We suggest that Hg2+ ↔ Zn2+ substitution in tetrahedrite is influenced by pH fluctuations and fluid mixing. These findings provide new insights into the geochemical processes governing trace element incorporation in sulfosalt minerals and offer valuable framework for understanding mineralization in similar hydrothermal systems worldwide.

Metagenomics reveals the characteristics and potential spread of microbiomes and virulence factor genes in the dairy cattle production system

Virulence factor genes (VFGs) pose a potential threat to ecological security and animal health, and have attracted increasing attention in the livestock industry. As one of the primary livestock types, dairy cattle may be an important source of VFG transmission. However, the distribution, transmission, and evolution of VFGs in the gastrointestinal tract and surrounding environment of dairy cattle remain unclear. In the present study, a total of 263 samples were collected from cows, calves, colostrum, farm wastewater, and soil. Metagenomics was conducted to analyze changes in the microbiome and VFGs characteristics in these ecological niches. The VFGs of the cows showed distinct differences between the rumen and feces, and were influenced by the region. The dominant VFG hosts was regulated by their microbial structure. Colostrum administration of cows increased VFG abundance in their newborn calf feces sharply and Enterobacteriaceae became the primary host. While diet was the primary driving force for the temporal variation in calf VFGs. For samples of the surrounding environment, water and soil had higher VFG concentrations and were more structurally stable. Moreover, extensive interactions between the mobile genetic elements and VFGs and gene mobile analysis map based on metagenomic binning both displayed the potential horizontal transfer ability of VFGs in the cows and environment. Our study revealed the prevalence, diffusion, and regulatory factors of VFGs in dairy cattle production systems, providing novel insights into reducing livestock VFGs and limiting their spread.

Bacterial hosts and horizontal transfer characteristics of clinically important tet(X)-variant genes in municipal wastewater treatment plants using epicPCR-directed cultivation strategy

Mobile tet(X)-variant genes confer resistance to a wide range of tetracyclines, including the antibiotic of last-resort, tigecycline, raising significant concerns regarding their potential spread cross-environmental dissemination. However, the bacterial hosts and environmental spread of these genes remain poorly understood. Herein, a retrospective study unveiled the prevalence of tet(X)-variant genes (ranging from tet(X3) to tet(X6)) in activated sludge samples from five municipal wastewater treatment plants (WWTPs) from 2013 to 2021. Among these variants, tet(X4) exhibited the highest detection frequency (100%) and abundance [(2.48 ± 3.07) × 107 copies/g dry weight] with an increasing trend. An epicPCR-directed cultivation strategy was proposed to facilitate the targeted isolation of tet(X4)-carrying bacterial hosts in activated sludge. This strategy involves the identification of bacterial host profiles using epicPCR and subsequent selective isolating target bacteria. Enterobacteriaceae emerged as the primary bacterial host for tet(X4), alongside previously unreported genera like Providencia, Advenella, and Moheibacter. Subsequent selective isolation of the most abundant Enterobacteriaceae based on the epicPCR-informed host spectrum yielded 39 tet(X4)-carrying Escherichia coli strains from the WWTP. Whole genome sequencing of tet(X4)-positive strains revealed that plasmid-mediated horizontal gene transfer is the primary mechanism driving tet(X4) dissemination. Plasmids including IncFIA(HI1)/IncHI1A/IncHI1B(R27) and IncX1, commonly reported in various clinical and animal settings, were identified as the predominant carriers of tet(X4). E. coli strains harbouring tet(X4) in the WWTP showed substantial genetic similarity to strains from hospital and animal sources, underscoring concerns about the potential risk of across diverse sectors. This study provided the first glimpse of the presence of mobile tet(X)-variants in WWTPs, and highlighted the promise of the epicPCR-directed cultivation strategy for exploring bacterial hosts of clinically important ARGs in different habitats from a One Health perspective.

Anomalous tellurium enrichment associated with gold mineralization: A mineralogical and isotopic study of the Yongxin Te-Au deposit, northeast China

The Yongxin tellurium-gold (Te-Au) deposit, a large epithermal deposit in the Duobaoshan polymetallic metallogenic belt (DPMB) within eastern section of the Central Asian Orogenic Belt (CAOB), is mainly hosted by syenogranite and mylonite. However, the Te-Au occurrence, precipitation mechanism and genesis in this deposit remain elusive. In this study, pyrite, the primary host of Te-Au mineralization, was studied utilizing multiparametric techniques such as scanning electron microscope (SEM), electron probe microanalysis (EPMA), in-situ laser ablation-inductively coupled plasma mass spectrometry (LA-ICP-MS) and femtosecond laser ablation coupled multi-collector inductively coupled plasma mass spectrometry (fs LA-MC-ICP-MS). The results show that there are three generations of pyrite termed here as Py1, Py2 and Py3. The coarse euhedral Py1 and fine vein Py2 contain negligible to low contents of Te and Au, whereas the anhedral aggregated Py3 with porosity and grain boundary (GB) shows the highest concentrations of Te and Au. Representative LA-ICP-MS profiles show that Te-Au occurs either as solid solution in the Py1 and Py2 or submicroscopic Au-Ag-Te-Bi inclusions, electrum and native gold in Py3. Thermodynamic data of telluride and sulfide show that the Te-Au was deposited under relatively oxidizing conditions with values of log f Te2 ranging from −15.2 to −11.2 and log f S2 from −16.7 to −12.1. at 200 °C. We infer that fluid mixing and fluid-rock interaction were the dominant mechanisms that triggered the precipitation of Te-Au in the Yongxin Te-Au deposit. Geochemical and geochronological data indicate that the likely source of Te is Te-rich oceanic sediments originating from the Western Pacific Plate. Pyrite and telluride from the gold deposits can be potential targets for Te exploration in the DPMB.

The occurrence patterns and alternative host use of the generalist parasitoid Parvilucifera infectans (Alveolata, Perkinsozoa) of marine dinoflagellates revealed by a high-frequency time series microscopic data at a temperate coastal site

Species belonging to the genus Parvilucifera (Alveolata, Perkinsozoa) are known as generalist parasitoids that can infect a variety of marine dinoflagellates and ultimately kill the host cell. Despite the accumulation of knowledge on Parvilucifera parasitoids over the last twenty years, the occurrence pattern and use of alternative hosts for persistent transmission within fluctuating natural dinoflagellate host communities have received relatively little attention. To address this, high-frequency (i.e., daily) time series protist monitoring was conducted for 411 days, from April 2020 to May 2021, at a temperate coastal site in Jinhae Bay, Republic of Korea. This site was characterized by frequent blooms of mixed dinoflagellates throughout most of the year. Nonetheless, Parvilucifera infections were detected only in the spring seasons, and its occurrence pattern was primarily governed by the presence and cell density of its primary dinoflagellate host, Akashiwo sanguinea. As long as the primary host was present at high densities (greater than 104 cells L-1), this primary host alone could support the transmission and persistence of the parasitoid. However, if the cell density of the primary host started to decline, then Parvilucifera searched for and exploited alternative hosts for its continued survival. Taken together, this study suggests that the presence and cell density of its preferred primary host species and the duration for which the density remains above the threshold level are key factors that regulate the timing of Parvilucifera occurrence and alternative host use.

Mosquito Feeding Habits in Coastal French Guiana: Mammals in the Crosshairs?

Pathogens transmitted by mosquitoes (Diptera, Culicidae) in sylvatic or urban cycles involve wild or domestic animals and humans, driven by various mosquito species with distinct host preferences. Understanding mosquito-host associations is crucial for ecological insights and pathogen surveillance. In this study, we analyzed mosquito blood meals from coastal French Guiana by amplifying and sequencing host DNA from blood-fed females. Using the 12S ribosomal RNA gene and Sanger sequencing, we identified blood meals from 26 mosquito species across six genera, with 59% belonging to the Culex genus. Nanopore sequencing of selected samples showed 12 mosquito species with one to three mixed blood-meal sources. Mammals were the primary hosts (88%), followed by birds (7%), squamates (3%), and amphibians (2%), indicating a strong preference for mammalian hosts. A total of 46 vertebrate host species were identified, demonstrating high host diversity. This research provides insights into mosquito host usage and highlights the complexities of monitoring arboviruses of public health concern.

Sequential immunization with chimeric hemagglutinin ΔNS1 attenuated influenza vaccines induces broad humoral and cellular immunity

Influenza viruses pose a threat to public health as evidenced by severe morbidity and mortality in humans on a yearly basis. Given the constant changes in the viral glycoproteins owing to antigenic drift, seasonal influenza vaccines need to be updated periodically and effectiveness often drops due to mismatches between vaccine and circulating strains. In addition, seasonal influenza vaccines are not protective against antigenically shifted influenza viruses with pandemic potential. Here, we have developed a highly immunogenic vaccination regimen based on live-attenuated influenza vaccines (LAIVs) comprised of an attenuated virus backbone lacking non-structural protein 1 (ΔNS1), the primary host interferon antagonist of influenza viruses, with chimeric hemagglutinins (cHA) composed of exotic avian head domains with a highly conserved stalk domain, to redirect the humoral response towards the HA stalk. In this study, we showed that cHA-LAIV vaccines induce robust serum and mucosal responses against group 1 stalk and confer antibody-dependent cell cytotoxicity activity. Mice that intranasally received cH8/1-ΔNS1 followed by a cH11/1-ΔNS1 heterologous booster had robust humoral responses for influenza A virus group 1 HAs and were protected from seasonal H1N1 influenza virus and heterologous highly pathogenic avian H5N1 lethal challenges. When compared with mice immunized with the standard of care or cold-adapted cHA-LAIV, cHA-ΔNS1 immunized mice had robust antigen-specific CD8+ T-cell responses which also correlated with markedly reduced lung pathology post-challenge. These observations support the development of a trivalent universal influenza vaccine for the protection against group 1 and group 2 influenza A viruses and influenza B viruses.

Complex structure of the center Oktyabr’sky deposit, Norilsk district, Russia

The PGE-Cu-Ni Oktyabr’sky deposit, related to the Kharaelakh intrusion, contains the largest sulfide ore bodies in the world. Various models have been proposed to explain its formation based on the mineralogical and textural characteristics of the sulfide ores. However, the underlying structure of the intrusion, critical to understanding the deposit’s formation, has not been well studied until now. For the first time a 3D model of the center deposit with C-3 and C-4 orebodies representing its main part has been created. The model reveals that the intrusion in this area is a thin plate, rather than a tubular or honolithic body, as previously assumed. This morphology does not support the idea of ore formation by in situ reaction between primary magma and host rocks. Instead, sulfides were transported by magma from a deeper zone in the chamber. Within this area, two pulses of magma were identified, forming the Northern and Southern intrusive branches. They are similar in inner structure; however, some differences exist. The rocks of these intrusions are identical in terms of their major components but differ in metals (Cu/Ni ratios, Co, Zn, and V contents), which is particularly reflected in the composition of the chalcopyrite group of minerals. The picritic gabbro-dolerites presented in both intrusive bodies crystallized under similar conditions, namely, T and fO2, with an accuracy of the applied methods (±15 °C and ± 0.4 lgfO2, respectively) from two portions of magma that differ from those of the taxitic gabbro-dolerites. Therefore, the Oktyabr’sky deposit has a more complex structure in its central part than has been previously reported. Considering earlier published data from the western and eastern parts, it can be concluded that the Karaelakh intrusion consists of several intrusive bodies rather than a single large massif that should be consider in future models.

Benefits of remating of a hyperparasitoid acting as a biocontrol agent

Encarsia sophia is the dominant parasitoid of invasive whitefly pest such as Bemisia tabaci. This heteronomous hyperparasitoid species lays fertilised diploid eggs in whitefly nymphs, which serve as primary hosts. Larvae develop as female progeny by consuming whitefly hosts, providing direct biocontrol benefits. However, male progeny originate from unfertilised eggs laid on secondary hosts (primary parasitoids within whitefly nymphs) and develop by consuming primary parasitoid larvae rather than whitefly hosts. Therefore, it is crucial for indoor rearing and field release of the hyperparasitoid to determine whether a female with single-mating experience can parasitise primary hosts and produce female progeny for a whole lifetime and, if not, whether it is remating events and prolong the period of female production, thereby increasing the amount of parasitism on whiteflies. Our fecundity experiments of females with single-mating experience, equally provided with primary and secondary hosts, showed that single mating was insufficient for E. sophia females to lay fertilised eggs in whitefly nymphs for their whole lifetime. In multiple mating experiments, 76.7 % of male adults completed their second mating 2 h after the first, whereas female adults accepted the second mating only if primary hosts were available thereafter. Remating was beneficial for female adults as it prolonged the ovipositional period of fertilised eggs (from 13.3 ± 0.6 days for single to 17.1 ± 0.7 days for twice mating) and increased parasitism on B. tabaci primary host (from 53.1 ± 3.8 for single to 76.4 ± 5.9 for twice mating respectively). The mating experience of males increased their copulation success, whereas that of females decreased it. In conclusion, recommendations are provided for large-scale indoor rearing and field release of E. sophia. Firstly, sufficient time for providing males can be shortened to within 2 h, and a single male can engage in 2–3 mating sessions. Following the 15-day peak oviposition period, the addition of newly emerged males is advised. Secondly, for field release of adult parasitoids, it is recommended to concentrate on releasing females after completing mating indoors. For the release of pupae cards, ensure a balanced ratio of males and females on each card to facilitate mating upon emergence. Additionally, release extra males and females 2 weeks after the initial batch of releases.

Vascular epiphytes of the South America Dry Diagonal: characterising their occurrence and richness in this neglected region

ABSTRACT The South America Dry Diagonal (SADD) is the most extensive and continuous portion of dry vegetation on the continent, characterised by lower rainfall and a marked dry season. Epiphytes are very poorly known and understudied in this area, even though they represent a high proportion of plant diversity in South America. Here, we compiled a dataset of epiphyte records from the SADD. The compiled epiphyte records date from 1859 to 2021, covering all four SADD domains, four countries, and 24 ecoregions. We utilised two databases for life form classification: Epilist and Brazil Flora Group. Our dataset contains 41,039 records distributed among 1119 epiphyte and hemiepiphyte species belonging to three main groups: angiosperms, ferns, and lycophytes. The SADD domains host a high number of unique species in each domain, with the Cerrado and Caatinga regions serving as primary hosts for the majority of species in the SADD dataset. Despite notable differences in species composition among domains, the least significant differences were observed between the Caatinga and Cerrado, as well as between the Chaco and the Pantanal. Orchidaceae, Bromeliaceae, and Polypodiaceae families exhibited the highest species diversity within the region. However, the species containing the highest number of specimens collected varied considerably among the domains. Herein, we also outlined some inconsistencies in the life-form classification across taxonomic bases, acknowledging the challenges of categorising epiphyte species while considering their intraspecific life-form variation.

A Systematic Assessment of Leishmania donovani Infection in Domestic and Wild Animal Reservoir Hosts of Zoonotic Visceral Leishmaniasis in India

Leishmaniasis is a neglected disease with a global spread that affects both domestic and wild animals in addition to people. Leishmania donovani is the suspected anthroponotic cause of visceral leishmaniasis (VL) in India, where it is an endemic disease. The reservoir hosts play a crucial role in the life cycle of the Leishmania parasite. The complicated connection between the pathogen, vector, and reservoir exhibits geographical and temporal diversity. Human-to-human and, to a lesser extent, human-to-animal transmission are the principal mechanisms for the maintenance of anthroponotic diseases. A number of animals were examined for the presence of Leishmania parasites and the findings were reviewed in order to examine the role of animal reservoirs in domestic transmission of cutaneous leishmaniasis in endemic regions of India. The analysis objective was to assess the research conducted on domestic animals’ propensity to spread L. donovani in endemic areas, with a particular emphasis on how proximity and animal density may impact the prevalence of human leishmaniasis. Species of the L. donovani complex have distinct enzootic, zoonotic, and anthroponotic life cycles that depend on the environment. The majority of Leishmania spp. are zoonotic, spreading from non-human mammals to humans. Many nations have leishmaniasis as an endemic disease, and the Indian subcontinent (ISC) has an estimated two to three lakh people who are at risk. This systematic review evaluates the gaps in our understanding of disease transmission that contradict conventional wisdom about the reservoir(s) of visceral leishmaniasis and efforts to manage it on the Indian subcontinent. Fundamental concerns in VL epidemiology and ecology will be clarified by a better understanding of L. donovani infection in domestic animals and its transfer to sandflies. A deliberate, systematic search was conducted on PubMed, Science Direct, and Google Scholar using keywords such as “Leishmania donovani”, “zoonotic visceral leishmaniasis”, and “wild animal reservoir for Leishmania donovani”. A total of 530 potentially relevant references were obtained from these databases, and 507 were not considered due to copy avoidance, irrelevant titles, research publications from nations other than India, or modified compositions. Among the remaining 23 investigations, 20 were rejected, and only 3 were included in the present study. Finally, three research papers with 867 goats, 161 cattle, 106 chickens, 26 sheep, three buffaloes, 406 dogs, and 309 rats were reported. Along with these data, studies across Asian and African countries that are considered VL-endemic areas have been discussed. According to the review, goats are the epidemic’s primary host and possible reservoir in several regions of India. In the endemic regions of the disease, some species of rodents, along with the canines, appear to be maintaining the L. donovani transmission cycle.

Investigation of pullulan polysaccharide as a sphalerite depressant for chalcopyrite separation: Flotation behavior and interfacial adsorption mechanism

The remarkable differences in the metallurgical processes of copper and zinc require their host minerals to be separated as far as possible during beneficiation. For chalcopyrite and sphalerite, the primary host minerals of copper and zinc, their green and efficient separation in the beneficiation stage remains a great challenge. This work is the first to employ environmentally friendly pullulan polysaccharide (PP) as a sphalerite depressant to assist in the concentration of chalcopyrite. Flotation experiments have revealed that PP possesses a selective depression action on sphalerite without having a large influence on the recovery of chalcopyrite. Characterization analysis has revealed that PP can be adsorbed onto chalcopyrite and sphalerite surfaces, but with a different response to subsequent sorption collectors. PP adsorbs to the Zn atoms on sphalerite surfaces via its O atoms in the C−O−H group and thus prevents the adsorption of sodium butyl xanthate (BX). The Fe sites on the chalcopyrite surface can adsorb PP, but this process does not affect the BX adsorption as the Cu sites remain exposed. Hence, PP can enhance the hydrophilicity of sphalerite without interfering with the hydrophobicity of chalcopyrite, resulting in a desirable separation effect. Overall, this work offers a promising scheme for the concentration of chalcopyrite from sphalerite during beneficiation, thereby contributing to the efficient exploitation of copper and zinc resources.

Impacts of assisted migration: An introduced herbivore has short‐term and long‐term effects on its native host plant population

AbstractAssisted migration consists of the introduction of a species to previously inhabited areas or to new suitable regions. Such introductions have been touted as a viable tool for conserving the earth's biodiversity. However, both the likely success of assisted migrations and the impacts on local communities are hotly debated. Empirical data on the local impacts of assisted migration are particularly lacking. We examined the short and long time‐scale effects of herbivory on Lonicera involucrata (Richards) Banks ex. Spreng (Caprifoliaceae) after an introduction of Euphydryas gillettii Barnes (Lepidoptera: Nymphalidae, Melitaeini) to Gunnison County, Colorado, USA, via an assisted migration in 1977. The plant is the primary larval host plant for the butterfly. We quantified plant seed production, plant survival, and population stage structure in two sets of observational experiments. We found that herbivory by E. gillettii increased L. involucrata reproduction on an annual time scale, independent of plant size and local microhabitat characteristics. Over the time since the butterfly's introduction, herbivory by E. gillettii resulted in a plant population structure biased toward smaller plants in the butterfly introduction and satellite sites compared with sites without the butterfly. Our results highlight the importance of studying the effects of assisted migrations on native populations at different temporal scales. As assisted migration becomes an indispensable tool for species conservation, our work adds to the understanding of the multi‐trophic impacts of assisted introductions on local populations and communities.

Dominant host phase of mercury within the sediments of the East China Sea inner shelf: Implications for mercury inputs

Mercury (Hg) concentrations normalized to their dominant hosts have been widely used to identify geological events such as massive volcanic eruptions. However, the modern Hg cycle has significantly changed, and the implications of host-normalized Hg concentrations for the Hg dynamics in contemporary coastal environments (e.g., sources, delivery mechanisms, and Hg fluxes) remain poorly understood. In this study, 66 surface sediment samples from the continental shelf of the East China Sea (ECS) were analyzed, and the total organic carbon (TOC), aluminum (Al), total sulfur (TS), and Hg concentrations were determined. Our results support that organic matter predominantly hosts Hg in these sediments. Factors such as the Hg source and abundances of organic fractions influence Hg distributions, with notable enrichment in the Changjiang River estuary and the inner shelf of the ECS, especially near the mud depocenter located off the Oujiang River estuary. The oxic to suboxic redox state and the lack of significant sulfide accumulation in surface sediments suggest that sulfides are not the primary Hg hosts. The Hg/TOC ratios, ranging from 3.0 to 169.6 (ppb/%), are particularly high in the Changjiang River estuary and exhibit an exponential correlation with the Hg accumulation rates (Hg-AR). These findings suggest that the host-normalized Hg concentration could serve as a valuable tool for assessing Hg dynamics where the accumulation rates are uncertain.

Land use conversion to uplands significantly increased the risk of antibiotic resistance genes in estuary area

Land use conversion in estuary wetlands may affect the transmission of antibiotic resistance genes (ARGs), while the risk rank of the ARGs and the change of clinically relevant ARGs under various land-use types are not well understood. This study used metagenomics to reveal the diversity and abundance of ARGs across five distinct land uses: reed wetland, tidal flat, grassland, agricultural land and fallow land, as well as their distribution and potential health risks. Results showed that high numbers of ARG subtypes and classes were detected irrespective of land-use types, notably higher in agricultural land (144 ARG subtypes). The most shared ARG subtypes were multidrug resistance genes across all the land uses (29 subtypes, 4.7 × 10−2-1.5 × 10−1 copies per 16S rRNA gene copy). Proteobacteria and Actinobacteria were primary ARG hosts, with 18 and 15 ARGs were found in both of them, respectively. The ARG subtype mdtB was the most dominant clinical ARG detected with 90 % amino acid identity. The change of ARGs exhibited a consistent trend across land uses in terms of health risk ranks, with the highest observed in fallow land and the lowest in reed wetland. This study reveals the distribution pattern of ARGs across various land-use types, and enhances our understanding of the potential health risks associated with ARGs in the context of coastal wetland conversion in estuary areas.

Insights into the ecology of the infant gut plasmidome

Plasmids are small DNA molecules that enable bacteria to share beneficial traits, influencing microbial communities. However, their role within the human gut microbiome remains largely unknown. In this study, we investigate the gut microbiomes of 34 mother-child cohorts, employing a plasmid analysis workflow to understand the impact of plasmids on the gut microbiome. We create a plasmid phylogenetic tree, devise a method for assigning plasmid hosts, and examine potential plasmid transfer networks. Our research discovers a wide variety of previously unidentified plasmid sequences, indicating that current databases do not fully represent the gut plasmidome. Interestingly, infants display greater plasmid diversity compared to mothers and other healthy adults. We find that Bacteroidota, a major bacterial phylum, serves as the primary host for gut plasmids and plays a dominant role in gut plasmid transfer events. Additionally, plasmids broaden the genetic capabilities of bacteria, with their influence on bacterial function becoming more apparent as children’s gut microbiomes develop. This study sheds light on the role of plasmids in the infant gut microbiome, making a significant contribution to our understanding of plasmid biology.