Phytophthora Infestans Populations Research Articles

Adaptation to the most abundant host genotype in an agricultural plant–pathogen system – potato late blight

This study investigated local adaptation of Phytophthora infestans populations, the causal agent of potato late blight, to two susceptible potato cultivars, each grown for a number of years and over large areas in separate French regions. We measured aggressiveness (quantitative pathogenicity) of each pathogen population to sympatric and allopatric hosts in a reciprocal cross-inoculation experiment. There was no evidence for specific host adaptation in this pathosystem. At both local and regional scales, the distribution of aggressiveness fits a pattern of adaptation to the most common host genotype. Our observations support the theoretical predictions that large pathogen dispersal rates and genetic drift, revealed by the comparisons of the genotypic structures of the populations tested, can lead to a local adaptation pattern detectable only at a large spatial scale. The unravelling of adaptive patterns at different spatial scales can be used for a more efficient management of the disease.

First Report of the A2 Mating Type of Phytophthora infestans on Tomato Crops in Taiwan, Republic of China

In a study of the Phytophthora infestans population in Taiwan, samples with symptoms typical of late blight were collected from field crops in an important potato- (Solanum tuberosum) and tomato-(Lycopersicon esculentum) production area in the central highlands region. Isolates were obtained by surface disinfecting leaf sections and plating them onto antibiotic-amended rye A agar (1). After subculturing, the pathogen was confirmed as P. infestans on the basis of morphological characters (2). Mating type was determined by co-inoculating unamended rye agar plates with mycelial plugs of the test isolate and a reference P. infestans isolate of either the A1 or A2 mating type (four plates per test isolate, two with different A1, and two with different A2 reference isolates). After incubation (15°C darkness, 7 to 14 days), plates were examined microscopically for the presence of oospores where the colonies interacted. In 2004, one isolate of 200 tested, and in 2006, one isolate of 102 tested, produced oospores only with A1 reference isolates and were concluded to be A2 mating type. In vitro testing showed the two A2 isolates were metalaxyl-resistant (ED50 values >100 mg of metalaxyl per liter on rye grain agar), which is typical of recent P. infestans isolates from potato and tomato in this area (2). Twenty-one single-sporangial isolates from each of the two A2 strains were tested for mating type against two different A1 isolates of P. infestans and confirmed as A2. These isolates were characterized using the techniques described by Deahl et al. (1) and had the allozyme genotype 100/100/111, 100/100 at the loci coding for glucose-6-phosphate isomerase and peptidase, respectively, and were mitochondrial haplotype IIb. This multi-locus genotype is characteristic of recent P. infestans isolates from tomato and potato in Taiwan, but all previous such isolates were A1 mating type and attributed to the US-11 clonal lineage (1). When evaluated on differential hosts, both A2 isolates were tomato race PH-1 and complex potato race R 0,1,2,3,4,7,9,11. RG57 fingerprinting showed that the A2 isolates had fingerprints identical to each other and to A1 P. infestans isolates of the US-11 clonal lineage from tomato in Taiwan (101 011 100 100 110 101 011 001 1). Koch's postulates were completed and the two A2 isolates were found to be highly aggressive on cultivars of potato and tomato. To our knowledge, this is the first report of A2 mating type strains of P. infestans in the field in Taiwan, but currently, their incidence is very low (<1%). One crop from which an A2 isolate was obtained also yielded an A1 isolate, while A1 isolates were obtained from crops in the vicinity of the other. The concurrent presence of the two mating types of P. infestans poses a risk of sexual reproduction and oospore formation in tomato or potato in Taiwan.

Phytophthora infestans Populations in Latvia

Phytophthora infestans Populations in Latvia Potato late blight caused by Phytophthora infestans (Mont.) de Bary is one of the most investigated plant pathogens. However, problems with disease control have increased in recent years, which plant pathologists have explained by its ability of forming oospores in potato leaves. Consequently, the P. infestans population over the world has become more aggressive and virulent and late blight on potato stems is common. Oospores could be found in field conditions in potato leaflets with two or more separate spots. In Latvia the P. infestans mating type A2 was found in the 1980s. A laboratory experiment on the formation of oospores in Latvia was started in 2002. The total number of collected samples was 215. The samples were collected from potato trial fields, conventional fields and from private gardens in different regions of Latvia. Many potato leaflets with two spots were observed at the end of the growing season when the disease severity exceeded 50%. The results showed that the formation of oospores on potato leaflets in the field took place in the P. infestans population in Latvia. Oospores were found in 80-94% of the investigated cases. The occurrence of oospores means that plant rotation and certified seed material are important measures for potato late blight control and the usage of fungicides may not be effective.

Effects of cropping history and origin of seed potatoes on population structure of Phytophthora infestans

The effects of origin of seed potatoes and the cropping history on the phenotypic structure of Phytophthora infestans populations was studied in northern Hessia, central Germany, from 2000 to 2002. Populations originating from fields with a history of potato cropping with only short or no rotation (old fields) were compared with populations from new fields, i.e., where no potatoes had been grown for at least 30 years and seed potatoes were either imported from breeders or produced on-farm (certified). The main goal was to determine the importance of seed potato infection in the establishment of new P. infestans populations. Isolates were characterized for mating type, virulences and rep- (repetitive extragenic palindromic) PCR fingerprints. Among a total of 639 isolates sampled from 31 sites, mating types A1 and A2 co-existed in all three years in 60–92% of the sites. Over all three years, 53 pathotypes were detected in a subsample of 272 isolates. Isolates originating from the new fields had significantly higher frequencies of the virulences v1, v2, v3, v6 and v7, indicating general effects of seed introduction into a new region. Thirty-six fingerprints were detected in a subsample of 281 isolates of which 22 were unique while four occurred in all three years and in many sites. Pathogen populations from potato fields that were grown from seed tubers of geographically different origin differed significantly based on χ 2 tests. While the Nei genetic distances were less than .1 among the local populations, distances to the US lineages US-1, US-6, US-7 and US-8 ranged from .22 to .47; however, the bootstrap values were not significant. Populations from old fields were more diverse and 14 of the 22 rep-PCR types occurred there among 132 isolates tested in comparison to six in the new fields (n = 140 isolates) and two among six isolates from volunteers. The results also suggest that both sexual and asexual reproduction play a role.

Late‐blight epidemics on potato in Finland, 1933–2002; increased and earlier occurrence of epidemics associated with climate change and lack of rotation

Changes in the incidence and onset of potato late‐blight epidemics in Finland were investigated and compared with possible changes in climate, presence of soil‐borne inoculum, and aggressiveness of Phytophthora infestans populations. Datasets were constructed from leaf blight assessments in cultivar trials or fungicide tests carried out at eight experimental sites during the periods 1933–1962 and 1983–2002. Additional data were obtained from late‐blight monitoring projects carried out from 1991 to 2002. From 1998 to 2002, the risk of blight outbreak was 17‐fold higher compared with the periods 1933–62 and 1983–1997. Simultaneously, the outbreaks of the epidemics began 2–4 weeks earlier. The changes observed were associated with a climate more conducive to blight in the late 1990s. Lack of rotation also advanced blight epidemics by an average of 9 days in 1998–2002, but it did not have this effect in 1992–1997, suggesting that soil borne inoculum may not have been a significant threat to potato until the late 1990s. The aggressiveness of the P. infestans isolates seemed to have only minor effect on the onset of the epidemics after 1991, as the apparent infection rate remained unchanged despite weather conditions more favourable to late blight in the late 1990s. As a consequence of the more frequent and earlier epidemics, the sales of fungicides used against late blight in Finland increased 4‐fold from the 1980s to 2002.

Host Specialization not Detected Among Isolates of the EC-1 Lineage of Phytophthora infestans Attacking Wild and Cultivated Potatoes in Peru

To determine whether populations of Phytophthora infestans attacking wild and cultivated potatoes in the highlands of Peru are specialized on their hosts of origin, we characterized isolates using several neutral markers, metalaxyl resistance and for aggressiveness in a detached leaf assay. One hundred and fifty-three isolates were collected from the northern and central highlands of Peru from different potato cultivars (both modern and native cultivars) and from different species of wild, tuber-bearing potatoes. All the isolates analyzed belonged to one of four clonal lineages that had been described previously in Peru: EC-1, US-1, PE-3 and PE-7. The EC-1 lineage (n = 133) was dominant and present in similar frequencies on wild and cultivated potatoes. PE-3 (n = 14) was found primarily on cultivated potatoes, with only one isolate coming from a wild host. US-1 (n = 2) and PE-7 (n = 4) were rare; all but one (PE-7) occurred on wild potatoes. Isolates from the EC-1 lineage from modern cultivars were compared in three separate detached leaf inoculation assays with EC-1 isolates from the wild potato species S. sogarandinum, S. bill-hookerii or S. huancabambense, respectively. No significant interactions between isolate type (from wild or cultivated potato) and host type (wild or cultivated) were measured for any assay. It appears that the pathogen genotypes in the EC-1 lineage indiscriminately attack both wild and cultivated tuber-bearing solanaceous hosts in Peru, and breeders should be able to select for resistance using the common EC-1 lineage.

Changes in race structure of Gpi 100:111:122 and Gpi 100:100:111 populations of Phytophthora infestans in Canada during 1997–1999

Phytophthora infestans causes late blight on both potato and tomato. In recent years, monitoring this pathogen became imperative because of its increasing aggressiveness and resistance to fungicides. Concurrent to these changes, dramatic shifts in the structure of P. infestans populations, including their genotypes, were recorded. To better understand such transitions and their potential impacts on potato, changes over time in the pathogenicity of this oomy cete were investigated. Over 1200 isolates were collected during three growing seasons, from 1997 to 1999, and 87 of them were chosen based on their host of origin (potato or tomato), glucose phosphate isomerase genotype (Gpi 100:111:122 or Gpi 100:100:111), and geographic origin (Canadian regions). The selected isolates were tested on a series of 10 differential potato host lines, which carried single resistance genes, to determine their physiologic races and their relationship to the host, the region of origin, and the Gpi genotype. This study revealed the presence of 46 pathotypes of P. infestans among the 87 tested isolates. A higher variability was observed within the Gpi 100:111:122 genotype (33 races among 55 isolates), as compared with the Gpi 100:100:111 genotype (16 races among 32 isolates). Comparatively to previous years, the number of race combinations found in this study was relatively high, and many differences were found between Gpi 100:111:122 and Gpi 100:100:111 populations. In contrast, no differences were found between potato and tomato isolates in terms of their physiologic races.

Computer aids for plant protection in Latvia*

The main agricultural crops where decision support systems (DSS) can be used via the Internet in Latvia are winter and spring cereals and potato. Two PC‐based models, forming part of a Danish DSS, were tested under the agroecological conditions of Latvia in 1999/2002: PC‐Plant Protection to control diseases in cereals and several modifications of the NegFry model for prediction of potato late blight. The results of 4 years of trials suggest that models that satisfy the needs of one pest may not fit another. The main reasons for failure to adapt PC models are differences in cultivar susceptibility, differences in pathogenicity, simultaneous action of other organisms and spatial placement of crops (forests, rivers and fallow land). For example, it is well known that, with the recent global migration of more aggressive strains and populations of Phytophthora infestans, late blight epidemics have become less predictable and, at the same time, less controllable in potato‐growing areas. For cereals, there is a different spectrum of prevailing pathogens, causing different levels of damage, requiring incorporation into models of thresholds corresponding to local conditions. Data from weekly monitoring of local fields, warnings about the local situation and meteorological information via the Internet are the most important computer‐aided elements for experts in plant protection.

Novel Genotypes in Phytophthora infestans Populations in Hungary

Twenty-seven isolates of Phytophthora infestans collected in Hungary in 2001 were tested for mating type, response to metalaxyl, isozyme genotype at glucose-6-phosphate isomerase (Gpi) and peptidase A (Pep) loci and nuclear DNA fingerprints with probe RG57. The ratios of the mating types A1 to A2 were 5:6 and 9:7 among isolates from potato and tomato, respectively. Seventeen isolates were sensitive to metalaxyl, 1 isolate responded intermediately and 9 isolates were resistant. No novel combinations of isozyme alleles were found; all isolates were Gpi 100/100, and genotypes at the Pep locus were 96/96 (63%), 83/96 (11%) and 100/100 (26%). In contrast, all of the 22 RG57 fingerprints exhibited patterns that have not been reported in Hungary before. On the basis of combined traits, 22 multilocus genotypes, unnoted elsewhere in Europe, were constructed among the 27 isolates analysed. These results indicate that variability in the Hungarian P. infestans populations is likely due to local events (asexual and sexual interactions) rather than migration from other countries.

Phenotypic and genotypic diversity of Phytophthora infestans populations in Scotland (1995–97)

In a survey of Scottish potato late blight (Phytophthora infestans) populations from 1995 to 1997, nearly 500 isolates were collected from over 80 disease outbreaks in commercial potato crops and gardens/allotments. The isolates were characterized by mating type, resistance to the fungicide metalaxyl and almost 300 were examined by DNA‐based AFLP fingerprinting. These data were examined alongside cropping details to determine the population structure in the context of existing disease management strategies. A1 and A2 mating type isolates were present in both commercial potato crops and gardens or allotments although they coexisted more frequently in the latter sites. One‐fifth of the isolates collected were of the A2 mating type and the frequency was similar over the 3 years and amongst sites. In 1995 the proportions of isolates that were sensitive and resistant to metalaxyl were equal (∼40%) but, over the following 2 years, the frequency of resistant isolates decreased and that of intermediate isolates increased. The mating type response to metalaxyl differed markedly, with 52% of A1 and only 5% of A2 isolates being resistant. Considerable molecular diversity was observed, with over half of the isolates having unique AFLP patterns. Analysis of the molecular and phenotypic data revealed a broad clustering of the population into three groups. Many factors point to an A2 population restricted by its sensitivity to phenylamides. The majority of the A2 isolates were found in a single AFLP group, but the presence of mixed mating type samples, an increasing frequency of isolates of intermediate metalaxyl resistance and the extent of the AFLP diversity suggest occasional sexual recombination, and thus gene flow, between groups.

Evaluation of Old Potato Late Blight Forecasting Rules During 1994-1999 in Fields with the New Phytophthora infestans Population in Norway

Experiments were conducted to evaluate potato late blight forecasting models in Norway during 1994-1999. Various adjustments of the Førsund rules (FØR) and the NEGFRY model were compared with routine fungicide applications. In the small plot experiments ( n =25) only the fungicide fluazinam was used, but in the large plot experiments ( n =13) several fungicides were included according to farmers' practice. A total of seven cultivars were included in the experiments, Beate and Saturna being the principal ones. Generally, fungicide treatments applied in accordance with the straightforward FØR provided acceptable control of leaf and tuber blight. Using forecast techniques, the number of treatments was reduced by 25-50% compared to routine treatments without causing significantly more disease. There were no significant differences in late blight control and treatment frequency between forecasts based on FØR, using historical weather data, and NEGFRY, using historical weather data and weather prognoses. The implications of the new pathogen population, cultivar resistance and farmers' acceptance of fungicide application being related to use of forecasts are discussed.

Potential of sexual reproduction among host‐adapted populations of Phytophthora infestans sensu lato in Ecuador

To determine the potential of sexual reproduction among host‐adapted populations of Phytophthora infestans sensu lato in Ecuador, 13 A1 isolates belonging to clonal lineages US‐1, EC‐1 and EC‐3, and 11 A2 isolates belonging to the clonal lineage EC‐2, were paired on agar plates to induce crossing. In the first experiment, six A1 isolates (three US‐1, two EC‐1 and one EC‐3) were each crossed with three A2 isolates (total = 18 crosses). Matings involving isolates of the EC‐1 lineage produced more oospores of healthy appearance than did matings with isolates of US‐1 or EC‐3. In the second experiment, the oospores of 35 crosses (21 EC‐1 × EC‐2; 10 US‐1 × EC‐2; four EC‐3 × EC‐2) were dispersed on water agar to assess oospore germination. Overall, germination percentages were low. Only one cross produced enough progeny for evaluation. Twenty‐three single‐oospore offspring were isolated and evaluated for mating type; electrophoretic patterns of glucose‐6‐phosphate isomerase (Gpi) and peptidase (Pep) alloenzyme loci; mitochondrial DNA haplotype; and genomic DNA fingerprint. Multilocus genotype data indicated that all 23 isolates resulted from meiotic recombination. Four progeny with homothallic phenotype appeared to be unstable heterokaryons. Markers at several loci segregated according to simple Mendelian expectations for a diploid organism, but the ratios of three RFLP loci and the Pep locus were not consistent with Mendelian expectations. All progeny were nonpathogenic on hosts of the parental genotypes. Reduced mating success and reduced pathogenic fitness of progeny appear to be postmating mechanisms of reproductive isolation in populations of P. infestans sensu lato in Ecuador.

Two decades of monitoring irish populations ofPhytophthora infestans for phenylamide resistance

Between 1981 and 1998,Phytophthora infestans populations in 878 potato crops in Ireland were monitored for phenylamide resistance. The incidence of resistance was very high in 1981 following intensive use of metalaxyl for blight control from 1977 onwards. It decreased rapidly in the absence of phenylamide use between 1981 and 1984. Following the reintroduction of phenylamide based fungicides in 1985, there was a rapid increase in phenylamide resistance following the widespread curative use of these fungicides. From 1990 onwards there was greater adherence among growers to the use of phenylamides in accordance with an antiresistance strategy and resistance distribution again decreased. During the 18-year period of the study, resistance was always lower at the beginning of the season and increased as the season progressed. Following the reintroduction of the phenylamide based fungicides in 1985 there was a steady increase in phenylamide use up to 1986 followed by a continuous decrease in use up to 1990. Since then there has been a steady increase in phenylamide use. They are currently used on some 60% of crops in Ireland and are still providing acceptable levels of disease control.

Characterization and mapping of Rpi1, a late-blight resistance locus from diploid (1EBN) Mexican Solanum pinnatisectum.

Solanum is a diverse genus with over 200 species occupying a range of habitats from the Southwestern United States to Central Chile. Germplasm evaluations have focused on species that can be crossed with S. tuberosum, while Mexican diploid (2n = 2x = 24) Solanum species with an Endosperm Balance Number (EBN) of 1 have received less attention because of poor crossability due to their ploidy and EBN. Recent changes in Phytophthora infestans populations have increased the need for new sources of genetic resistance to this fungus. We have characterized resistance to P. infestans in the Mexican 2x(1EBN) species S. pinnatisectum. An interspecific hybrid between resistant S. pinnatisectum and susceptible S. cardiophyllum plants was backcrossed to S. cardiophyllum to generate a family segregating for late-blight resistance. The diploid (1EBN) genetic map generated with 99 RFLP markers revealed extensive synteny with previously published potato maps. A single dominant late-blight resistance locus (Rpi1) from S. pinnatisectum was mapped to chromosome 7, a region previously not associated with late-blight resistance. Characterization of the P.infestans isolate used for disease evaluations revealed that it possessed the avirulence gene corresponding to the R9 resistance locus, indicating that Rpi1 could possibly correspond to R9.

Characterization of South African Isolates of Phytophthora infestans.

Severe late blight epidemics in South Africa in 1995 and 1996 prompted an investigation into the mating type, genotype, and metalaxyl sensitivity of populations of Phytophthora infestans. A country-wide survey was conducted from 1996 to 1998 in which isolates were collected from 101 potato fields (656 isolates) and 16 tomato fields (57 isolates). Six hundred and fifty-seven isolates (600 potato and 57 tomato) were analyzed for mating type, while subsets of isolates were analyzed for genotype at the Glucose-6-phosphate isomerase locus (n = 148), DNA fingerprinting with probe RG-57 (n = 61) and mitochondrial DNA haplotype (n = 20). All isolates tested had the characteristics typical of the pre-1980 population (A1 mating type, 86/100 Gpi genotype, US-1 fingerprint pattern, and mtDNA haplotype I-b) previously found worldwide. Metalaxyl sensitivity testing of 656 potato isolates by the in vitro leaf disk method showed that the frequency of highly resistant isolates (50% effective concentration [EC50] > 200 μg a.i./ml) in potato production regions increased from 35% in 1996 to 51% in 1997. The high frequency of resistant isolates was confined to the southern coastal regions in 1996 and 1997, as well as the western Free State in 1997. Although phenylamides were withdrawn from the southern coastal region in December 1996, screening tests carried out in 1998 indicated that resistance levels remained high (≥83%). Sensitive isolates (EC50 < 40 μg a.i./ml) predominated in the remaining six potato production regions. Screening of 45 isolates collected from tomatoes indicated that no resistant strains were present in the sample tested.

Novel genotypes ofPhytophthora infestans in Canada during 1994 and 1995

Populations ofPhytophthora infestans, causing late blight of potato, changed significantly in Canada in the mid-1990s. The US-1 genotype (A1, metalaxylsensitive [MS]) was displaced by novel genotypes (mainly US-8) in much of the country in 1994 and 1995. Many of the new genotypes were insensitive to metalaxyl and were of the A2 mating type, although metalaxyl-insensitive (MI) Al isolates of the gll (or US-11) genotype were found in British Columbia. A total of 14 unique multilocus genotypes were described over the two years of the study based on mating type (Al or A2), metalaxyl sensitivity (MS or MI), allozyme banding patterns (Gpi andPep), and random amplified polymorphic DNA (RAPD) markers. Six of these genotypes could be distinguished by allozyme banding patterns at theGpi locus alone; RAPD analysis revealed additional variation within allozyme groupings and defined additional genotypes. Among 82 isolates collected from various Canadian provinces in 1994, US-1 and US-8 constituted 30% and 49% of isolates, respectively; other genotypes occurred in minor frequency. Among 50 isolates collected in 1995, US-1 and US-8 constituted 10% and 74%, respectively. Isolates of gll (US-11) were found in British Columbia in 1995. Diversity of genotypes was greater in 1994 (11 genotypes) than in 1995 (six genotypes). We hypothesize that sexual reproduction may have been responsible for generating some of the genetic variability inP. infestans populations, during a time period in which A2 isolates first migrated into many provinces in Canada.

Temporal and Spatial Patterns of Genetic Structure of Phytophthora infestans from Tomato and Potato in the Del Fuerte Valley

ABSTRACT The temporal and spatial patterns of Phytophthora infestans population genetic structure were analyzed in the Del Fuerte Valley, Sinaloa, Mexico, during the crop seasons of 1994 to 1995, 1995 to 1996, and 1996 to 1997 by geographical information systems. Isolates of P. infestans were obtained from infected tissue of tomato and potato collected from two areas: (i) where both potatoes and tomatoes are grown, and (ii) where only tomatoes are grown. The isolates were characterized by mating type, allozymes at the glucose-6-phosphate isomerase and peptidase loci, restriction fragment length polymorphism (RFLP) fingerprint with probe RG57, metalaxyl sensitivity, and aggressiveness to tomato and potato. The results suggest presence of an asexual population with frequent immigrations from outside the valley. There was a shift of mating type in the population from predominantly A2 to completely A1 in this period. The co-occurrence of mating types was restricted to very few fields in the area around Los Mochis where tomato and potato crops are grown. Genotype variation based on allozyme analysis and mating type was low with only one genotype affecting both crops each year. The genotypes affecting both crops were the only genotypes highly aggressive to both tomato and potato in laboratory aggressiveness tests and the only genotypes widespread on both the tomato and potato crops in the valley each year. These predominant genotypes were highly resistant to the fungicide metalaxyl. Data on metalaxyl sensitivity indicate that allozyme analysis can discriminate between sensitive and resistant isolates in the Del Fuerte Valley. RFLP analysis with the probe RG57 gives further discrimination of genotypes within an allozyme genotype. In the 1995 to 1996 season, four different RFLP genotypes were found within an allozyme genotype. However, there were five other dilocus allozyme genotypes that could not be further split by RFLP analysis in 1995 to 1996 and 1996 to 1997 seasons. Spatial analysis of genotypes suggests that each season individual fields near Los Mochis became infected with one or more genotypes, but only a single genotype, aggressive on both potato and tomato, occurred south and east to the Guasave area.

Inoculum Sources and Genotypic Diversity of Phytophthora infestans in Southern Flevoland, The Netherlands

Genotypic changes in populations of Phytophthora infestans in Southern Flevoland (150 km2) were analysed by characterising isolates from potato refuse piles, conventional and organic potato fields, and potatoes and tomatoes in allotment gardens for mating type (1712 isolates) and DNA fingerprint pattern using probe RG57 (1048 isolates). The overall percentages of genotypes (and of isolates) that were A2 varied from 32 (4) in 1994 to 45 (56) in 1996. Among the 1048 isolates 170 different genotypes were identified, of which 138 (81%) were ‘rare’ (i.e., detected in only one sampling site in the research area during 1993–1996). Many rare genotypes were encountered in organic potato fields and in allotment gardens. In 1994 and 1995, four genotypes were abundant. The highest percentages of isolates with these ‘common’ genotypes were encountered in refuse piles and conventional potato fields. The common genotypes were nearly absent in 1996, suggesting that the population may have passed through a bottleneck at the transition from 1995 to 1996. The Shannon index of genotypic diversity was high in allotment gardens and in organic potato fields. For the total populations the normalised Shannon index of genotypic diversity increased from 0.34 in 1994, with weather favourable to late blight, to 0.61 in 1996, with unfavourable weather. The high numbers of rare genotypes detected every year indicate that oospores may act as an infection source in commercial potato fields. However, refuse piles were identified as the most important infection sources for commercial fields in 1994 and 1995. In 1996 disease in commercial organic fields was probably initiated by a few genotypes originating from seed tubers. In allotment gardens oospores were probably the most important infection source.

Assessment of mating types and resistance to metalaxyl of Canadian populations ofPhytophthora infestans in 1997

The distribution of A1 and A2 mating types, and of metalaxyl-sensitive (MS), metalaxyl-intermediate (MI), and metalaxyl-resistant (MR) strains ofPhytophthora infestans, the causal pathogen of late blight, were determined in Canada in 1997. Potato plants or tubers and tomato plants or fruits, suspected to have late blight infection, were received from seven Canadian provinces in 1997, and were assessed for the presence ofP. infestans. Among 220 samples suspected to have late blight,P. infestans was recovered from 132 samples (60%) received from British Columbia (BC), Manitoba, New Brunswick, Prince Edward Island, and Quebec. From the 132 samples, 364 isolates were obtained and tested for their mating type and response to metalaxyl. Populations ofP. infestans within Canadian provinces were homogeneous for mating types, except within BC, where populations comprised both A1 and A2 mating types both within fields and sometimes within samples. The A2 mating type was found in all provinces where late blight was present. The A1 mating type was found only in Manitoba (1 isolate) and in BC (38 isolates). Unlike the old A1 isolates, those found in BC in 1997 were highly resistant to metalaxyl. These A1 isolates are even more resistant than A2 isolates. Based on assays with 10 ug.ml−1 of metalaxyl, 14% of all tested isolates were MS, 69.8% were MI and 16.2% were MR. In addition, all provinces contained MS, MI, and MR isolates. No specific mating type or metalaxyl sensitivity level were specific to tomato or potato.

Aggressiveness and Competitive Fitness of Phytophthora infestans Isolates Collected from Potato and Tomato in France

ABSTRACT To test the hypothesis that host-related differences in the genotypic composition of populations of the late blight pathogen Phytophthora infestans can be explained by differential pathogenicity, the aggressiveness of isolates of the pathogen collected in France from potato and tomato was measured on detached leaflets of potato (cv. Bintje) and tomato (cv. Marmande). A preliminary trial with four isolates (two each from potato and tomato) showed that lesion appearance and development were similar for each isolate in detached leaflets and in whole plant tests in growth cabinets. Isolates collected from tomato were more pathogenic to tomato than isolates collected from potato. This was particularly the case for isolates belonging to the A2 mating type. Isolates originating from potato had a higher infection efficiency and a higher sporulation capacity on this host, but they induced lesions that generally spread more slowly than those caused by isolates from tomato. Extensive variation for components of aggressiveness on potato, and to a lesser extent on tomato, was observed in collections of isolates from each of the two hosts. Competition experiments between one potato isolate and one tomato isolate in field plots of the susceptible potato cv. Bintje clearly demonstrated the higher competitive fitness of the potato isolate on its host of origin. Therefore, differential pathogenicity to potato and tomato certainly contributes to the differentiation between P. infestans populations present on potato and tomato in France; however, additional factors, possibly related to survival ability or random genetic drift, are probably also involved and may explain the persistence of weakly pathogenic isolates in these populations.