Mechanical solid-liquid separation is an emerging closed-loop technology to recover and recycle carbon, nutrients and water from dilute livestock manure. This closed-loop concept is tested using a modular separation technology (Z-Filter) applied at full-scale for the first time to treat effluent from a pasture-based dairy. Effluent flow rates were 200–400 L min−1 at a total solids (TS) content of 0.52% (pH 7.2). Separation efficiency and composition of the separated solid fraction were determined, and chemically-assisted separation with cationic polymer flocculant with/without hydrated lime was also tested. Without flocculant and lime, 25.9% of TS and 33.4% of volatile solids (VS) ended up in the solid fraction, but total Kjeldahl nitrogen (TKN), phosphorus (P) and potassium recovery was not significant, likely being in poorly separable fine particle or soluble fractions. With a 5% flow-based dosage of flocculant, most of the TS (69%) and VS (85%), and notable amounts of TKN (52–56%) and P (40%) ended up in the solid fraction. Phosphorus recovery was further increased to 91% when both flocculant and hydrated lime was added up to pH 9.2. The solid fraction was stackable with 16–20% TS, making transport more economical to enable further processing and beneficial reuse of nutrients and organic matter. Removal of VS also reduces fugitive methane emissions from uncovered anaerobic effluent ponds. Overall, the results indicated that solid-liquid separation could provide improved environmental management options for dairy farmers with dilute manure effluent to beneficially utilise organic matter and nutrients.