AbstractSea urchin sperm outer arm dynein is a multi‐subunit protein composed of heavy chains, intermediate chains, and light chains. We prepared monoclonal and affinity‐purified polyclonal antibodies to heavy and intermediate chain subunits and examined whether the embryonic ciliary axonemes ofthe same species contain the polypeptides sharing epitopes with them. Ciliary axonemes contained a high molecular weight polypeptide with the exact same mobility as flagellar β‐heavy chain. This polypeptide also shared epitopes with it. In contrast, no polypeptide had the exact same molecular weight as flagellar α‐heavy chain and shared epitopes with it. Western blots showed that ciliary axonemes also contain three polypeptides sharing epitopes with the respective flagellar intermediate chain. The present results revealed that the α‐heavy chains of flagellar and ciliary outer arm dyneins are different.
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