Podocyte injury plays a critical role in the pathogenesis and progression of focal and segmental glomerulosclerosis (FSGS). Transmembrane protein 30A (TMEM30A) downregulation participates in podocyte injury. This study aimed to identify the critical pathways and molecules associated with the downregulation of TMEM30A in the context of FSGS podocyte injury. In our study, we found TMEM30A and podocyte marker Synaptopodin were significantly downregulated in kidney tissues from patients with FSGS compared to those in normal controls. Using transcriptomic and metabolomic analyses, we characterized Tmem30a knockdown (KD) and normal mouse podocytes to identify differentially expressed genes and metabolites. Then, Gene Ontology, Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Set Enrichment Analysis (GSEA), and Protein-Protein Interaction (PPI) network were constructed, and the differentially expressed genes and metabolites were enriched into glycolytic pathway. Furthermore, we found the key glycolytic enzymes were downregulated in patients with FSGS, podocyte-specific Tmem30aLoxP/LoxP; NPHS2-Cre mice, and Tmem30a KD mouse podocytes. For rescue experiments, shTmem30a-resistant cDNA (resTmem30a) was created to intervene Tmem30a KD mouse podocytes. And we observed that podocyte-related molecules were downregulated in the Tmem30a KD group, along with glycolysis-related molecules, but the resTmem30a partially reversed this trend. Our findings clarified TMEM30A downregulation initiates podocyte injury by reducing glycolysis-related molecules (ALDOA, HK2, LDHA, and GAPDH) in FSGS and have implications for early diagnosis, prevention, and treatment.
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