Biome Research Articles

Population structure and natural selection across a flower color polymorphism in the desert plant Encelia farinosa.

Clines-or the geographic sorting of phenotypes across continual space-provide an opportunity to understand the interaction of dispersal, selection, and history in structuring polymorphisms. In this study, we combine field-sampling, genetics, climatic analyses, and machine learning to understand a flower color polymorphism in the wide-ranging desert annual Encelia farinosa. We find evidence for replicated transitions in disk floret color from brown to yellow across spatial scales, with the most prominent cline stretching ~100 km from southwestern United States into México. Because population structure across the cline is minimal, selection is more likely than drift to have an important role in determining cline width. Given that the cline aligns with a climatic transition but there is no evidence for pollinator preference for flower color, we hypothesize that floret color likely varies as a function of climatic conditions.

Response of Species Diversity and Stability of Typical Steppe Plant Communities on the Mongolian Plateau to Different Grazing Patterns

ABSTRACTGrasslands represent a major biome on Earth and play a vital role in ecosystem functioning and dynamics. However, owing to the variations among grassland types, the impact of grazing on plant community diversity and stability remains unclear. This study is based on the typical steppe of the Mongolian Plateau. Field sampling and data analysis were combined to qualitatively and quantitatively investigate the structural characteristics, species diversity, and stability of plant communities under varying grazing intensities, that is, four‐season nomadic, two‐season rotational, and sedentary grazing (FSNG, TSRG, and SG, respectively). The results indicated that FSNG pastures exhibited the largest number of plant species while FSNG and TSRG pastures exhibited relatively high importance values for the primary dominant species. Carex duriuscula, Chenopodium glaucum, and Cleistogenes squarrosa were prominent in SG pastures, with C. duriuscula having the largest importance value. The mean height, cover, and aboveground biomass of plant communities in FSNG were significantly higher than those in SG (p < 0.05), with no significant difference observed between FSNG and TSRG. FSNG also demonstrated the highest Shannon–Wiener, Simpson, and Pielou indexes. The Shannon–Wiener and Simpson indexes between the FSNG, TSRG, and SG pastures showed significant differences (p < 0.05). Nomadic plant communities displayed positive loosely interspecific traits, suggesting independence and positive succession. Conversely, communities in TSRG and SG exhibited negative correlations and higher instability. The stability analysis ranked community stability as FSNG > TSRG > SG, suggesting that judicious grazing practices could enhance grassland stability. The findings reveal that grazing patterns influence plant community composition and function and that FSNG pastures promote higher species diversity, perennial dominance, and overall stability compared with TSRG and SG pastures.

Agricultural management reshaped the diversity patterns and community assembly of rhizosphere bacterial communities in a desert farming system

Desert farming represents human intervention in previously untouched desert landscapes, transforming natural desert areas into managed agricultural farmland. Despite the growing prevalence of desert farming, the effects of agricultural management on soil and microbial dynamics in desert environments are not well understood. This study analyzed rhizosphere bacterial community from crops (corn and wheat) in desert farms and desert plants (Artemisia desertorum) in natural desert environments to explore how bacterial communities respond to agricultural management in desert farming systems. Our results showed that the composition and diversity of rhizosphere bacterial communities were influenced more by the sampling region than by plant type. Bacterial species richness, phylogenetic diversity, and functional traits were significantly affected by moisture and temperature, whereas pH and nitrogen-related factors (total nitrogen, NO3-N, and NH4-N) were stronger correlates of functional differences in the microbial community. We found that the co-occurrence network of bacterial communities exhibited tighter and more positive interactions in natural desert, but was more stable in desert farm. Deterministic processes predominantly governed bacterial community assembly in both desert farms and natural desert, but the importance of stochastic processes increased in desert farms due to reduced environmental stress from agricultural management. These findings provide valuable insights into the impacts of agricultural management on rhizosphere bacterial communities, highlighting the roles of temperature, moisture, and nutrient supply in predicting microbial diversity, function, species interactions, and community assembly. Given the crucial functional roles of rhizosphere microbes, our conclusions can inform desert farm management practices to better manipulate microbial communities for optimized crop production.

Geography and ecology structure diversification in Ziziphus Mill. (Rhamnaceae)

Understanding the processes responsible for creating and preserving biodiversity within tropical ecosystems is essential for gaining deeper insights into the history, dynamics, and resilience of these environments. We investigated the biogeography and evolution of Ziziphus Mill. (Rhamnaceae), a genus of c.50 species found in all major tropical biomes and across Africa, Asia and Australasia to evaluate how ecology and geography structures its diversification, and their associations with functional traits. We used consistency and retention indices, as well as the delta statistic to test for phylogenetic signal in ecology, geography and functional traits. We constructed a time-calibrated phylogeny using BEAST, followed by the reconstruction of biome and geographical affinities in BioGeoBEARS, and ancestral functional trait evolution using phytools and ape. At a global scale, geography structures Ziziphus’ diversification more than ecology, as evidenced by higher phylogenetic signal in retention indices and the delta statistic. Multiple ecological switches among biomes are associated with dispersal events, which structure Ziziphus’ diversification at smaller scales. Biogeographic estimation suggests that Ziziphus evolved out of closed biomes in Asia during the Oligocene. Long distance dispersal from Asia to Africa resulted in the occupation of two novel biomes, the expanding tropical grassy biome and the desertic biome. Geographic transitions across continents that retain the same biome are fewer but are demonstrated by a dispersal from the closed biome in Asia to the same ecological setting in Australia. In keeping with the younger age of the savanna biome and the Pliocene radiation of geoxylic species, the youngest species in Ziziphus are mostly found in open biomes, and the youngest habit is geoxylic. Leaf hair appears to confer advantages across biomes whilst being a synapomorphy for open and desertic clades. One of two evolutions back into closed biomes is associated with the development of the liana habit. We inferred the most complete phylogeny for Ziziphus to date. Ziziphus originated in closed biomes in Asia in the Oligocene. At a global scale, geography structures diversification more than ecology (biome preference) in Ziziphus. Biome shifts are frequently associated with long distance dispersal events. Shifts in growth form are frequently associated with biome shifts.

Litter mixture effects on nitrogen dynamics during decomposition predominantly vary among biomes but little with litter identity, diversity and soil fauna

Nitrogen (N) is essential for net primary production, with much of the required N in terrestrial ecosystems derived from recycling via litter decomposition. The diversity and identity of plant species and decomposer organisms affect N cycling during litter decomposition, yet the generality and magnitude of these effects remain uncertain. To fill this gap, a decomposition experiment with four leaf litter species that differed widely in initial litter quality was conducted including single species and all possible multispecies mixtures, with and without microarthropods access across a broad latitudinal gradient covering four major forest biomes of the Northern Hemisphere. The results showed that leaf litter N dynamics (both N loss and N immobilization) in single species treatments depended primarily on litter species identity and the local environmental context. We found strong mixture effects, that overall tended to increase N loss and to reduce 15N transfer. The relative mixture effects on N dynamics differed among forest biomes, but were little affected by the other factors we manipulated. The N loss of individual litter species in mixtures not only depended on litter identity and soil microarthropod access, but also on forest biomes; while 15N transfer depended strongly on litter mixing, independently of litter species richness or composition of the mixtures. Litter N dynamics were mainly driven by a small subset of litter traits, regardless of species richness and microarthropod access. Overall, our results highlight that litter mixture strongly affects N dynamics during decomposition, with the mixture effects predominantly varying among forest biomes but little with litter identity, diversity and microarthropod access. To improve predictions on how changes in tree species composition and diversity may impact nutrient dynamics in forest ecosystems in face of increasing N deposition, interactions between litter and soil but also within litter mixtures need closer attention.

Flavonoid Synthesis Pathway Response to Low-Temperature Stress in a Desert Medicinal Plant, Agriophyllum Squarrosum (Sandrice).

Background/Objectives:Agriophyllum squarrosum (L.) Moq. (A. squarrosum), also known as sandrice, is an important medicinal plant widely distributed in dunes across all the deserts of China. Common garden trials have shown content variations in flavonoids among the ecotypes of sandrice, which correlated with temperature heterogeneity in situ. However, there have not been any environmental control experiments to further elucidate whether the accumulation of flavonoids was triggered by cold stress; Methods: This study conducted a four-day ambient 4 °C low-temperature treatment on three ecotypes along with an in situ annual mean temperature gradient (Dulan (DL), Aerxiang (AEX), and Dengkou (DK)); Results: Target metabolomics showed that 12 out of 14 flavonoids in sandrice were driven by cold stress. Among them, several flavonoids were significantly up-regulated, such as naringenin and naringenin chalcone in all three ecotypes; isorhamnetin, quercetin, dihydroquercetin, and kaempferol in DL and AEX; and astragalin in DK. They were accompanied by 19 structural genes of flavonoid synthesis and 33 transcription factors were markedly triggered by cold stress in sandrice. The upstream genes, AsqAEX006535-CHS, AsqAEX016074-C4H, and AsqAEX004011-4CL, were highly correlated with the enrichment of naringenin, which could be fine-tuned by AsqAEX015868-bHLH62, AsqAEX001711-MYB12, and AsqAEX002220-MYB1R1; Conclusions: This study sheds light on how desert plants like sandrice adapt to cold stress by relying on a unique flavonoid biosynthesis mechanism that regulating the accumulation of naringenin. It also supports the precise development of sandrice for the medicinal industry. Specifically, quercetin and isorhamnetin should be targeted for development in DL and AEX, while astragalin should be precisely developed in DK.

An approach to designing efficient implementation of 30×30 terrestrial conservation commitments

AbstractIn response to biodiversity declines worldwide, over 190 nations committed to protect 30% of their lands and waters by 2030 (hereafter, 30×30). Systematic conservation planning and return on investment analysis can be helpful tools for determining where protection efforts could deliver the most efficient and effective reserve design, and supporting decision‐making when trade‐offs among objectives are required. Here, we propose a framework for efficient “30×30” implementation and apply it to the state of California (USA). Because conservation of a region's full suite of biodiversity is the primary objective of the global initiative, we prioritized representation in our analysis. We used Zonation to identify networks that close the gap in representation of major habitat types in California's protected area network and that also conserve the places important for biodiversity or climate change mitigation. We identified networks that are efficient relative to metrics likely to be important in implementation including land acquisition cost, number of transactions, and conservation benefit per hectare, and we illustrate not only trade‐offs associated with these metrics but also differences in the co‐benefits achieved. Five of the eight major habitat types in California are not currently protected at a 30% level statewide, and if representation was achieved solely through private land acquisition, targets could be met for as little as $5.84 billion, with as few as 364 transactions, or with 2.18 million additional conserved hectares. Implementation of 30×30 will likely require more flexibility than a single network design. A “no regrets” action would be to protect properties that were prioritized across all networks and additional implementation should include properties with characteristics of any of the individual networks. Our analytical framework and implementation guidance can be applied to other geographies and jurisdictions to increase the likelihood of both meeting 30×30 targets and delivering the conservation benefits they aim to secure.

Historical biogeography and the evolution of habitat preference in the North American camel spider family, Eremobatidae (Arachnida:Solifugae)

Abiotic variables can influence species distributions, often restricting taxa to an acquired climatic signature or conversely, related species are conserved in the same ecological space over millions of years. An investigation into how abiotic change has shaped geographic distributions of taxa may be key to understanding diversification of lineages, and in the absence of reliable morphological characteristics, such information may support taxonomic units at multiple scales.Here, we examine the historical biogeography and patterns of habitat preference within the North American solifuge family, Eremobatidae. A previous study demonstrated that a major taxonomic revision of Eremobatidae is warranted, however recent studies demonstrate high levels of morphological convergence within the group, thus a re-classification of generic boundaries using additional information must be prioritized before we can formally begin solid revisionary efforts. In this study, we aimed to reconstruct a well-resolved phylogenetic hypothesis of Eremobatidae by filtering UCE loci based on informativeness, by mitigating the effect of cogenic UCE on phylogenetic estimation, and by supplementing our curated UCE loci with mitochondrial information. Using our preferred topology, in conjunction with published estimated divergence dates for Eremobatidae, we inferred a time-calibrated phylogenetic hypothesis to inform the historical biogeography and patterns of habitat preference. The two major habitat types that were observed for Eremobatidae were warm deserts for early diverging taxa and a subsequent evolution to cold deserts and Mediterranean California ecoregions for later diverging taxa. Eremobatid niche space, determined by temperature and precipitation, has been conserved for at least 25 million years in North America, supporting a warm desert origin, and thus supporting high species richness in the Sonoran and Mexican Plateau. Overall, our study provides support for new generic level designations within Eremobatidae.

Root exudates facilitate the regulation of soil microbial community function in the genus Haloxylon.

Root exudates act as the "language" of plant-soil communication, facilitating crucial interactions, information exchange, and energy transfer between plants and soil. The interactions facilitated by root exudates between plants and microorganisms in the rhizosphere are crucial for nutrient uptake and stress resilience in plants. However, the mechanism underlying the interaction between root exudates and rhizosphere microorganisms in desert plants under drought conditions remains unclear, especially among closely related species. To reveal the ecological strategies employed by the genus Haloxylon in different habitats. Using DNA extraction and sequencing and UPLC-Q-Tof/MS methods, we studied root exudates and soil microorganisms from two closely related species, Haloxylon ammodendron (HA) and Haloxylon persicum (HP), to assess differences in their root exudates, soil microbial composition, and interactions. Significant differences were found in soil properties and root traits between the two species, among which soil water content (SWC) and soil organic carbon (SOC) in rhizosphere and bulk soils (P < 0.05). While the metabolite classification of root exudates was similar, their components varied, with terpenoids being the main differential metabolites. Soil microbial structure and diversity also exhibited significant differences, with distinct key species in the network and differential functional processes mainly related to nitrogen and carbon cycles. Strong correlations were observed between root exudate-mediated root traits, soil microorganisms, and soil properties, although the complex interactions differed between the two closely relative species. The primary metabolites found in the network of HA include sugars and fatty acids, while HP relies on secondary metabolites, steroids and terpenoids. These findings suggest that root exudates are key in shaping rhizosphere microbial communities, increasing microbial functionality, fostering symbiotic relationships with hosts, and bolstering the resilience of plants to environmental stress.

Effect of Drought and Rehydration on Physiological Characteristics of Agriophyllum squarrosum (L.) Moq. in Different Habitats.

Agriophyllum squarrosum (L.) Moq. is a highly prevalent xerophytic species found throughout northern China. It is suitable for cultivation in semi-arid sandy environments and may establish roots in arid desert locations. This species plays a pioneering and exploratory role in the colonization of desert plants. In this study, we selected A. squarrosum from the Urat desert steppe (UD) and Horqin sandy land (HS) to explore their adaptation mechanisms to drought and rehydration environments by using the pot weighing control method to simulate an arid environment. The findings showed that the control (watering to 60-65% of field capacity) exceeded its required amount and the leaves turned yellow. The chlorophyll content was lower than those under moderate and severe drought, and rehydration caused a decrease. However, the contents of malondialdehyde, soluble sugar, and proline in the drought treatment were higher than those in the control. Under moderate and severe drought, the chlorophyll content and the quantum efficiency of photosystem II (Fv/Fm) of A. squarrosum from UD were higher than those from HS. During drought and rehydration processes, the proline content was relatively lower, while the activities of peroxidase (POD), superoxide dismutase (SOD), and catalase (CAT) and the content of soluble sugar and soluble protein were higher. However, antioxidant enzymes and osmoregulators from UD were higher than those from HS. The results suggest that the stronger ability of A. squarrosum to endure drought environments in UD is due to the high level of antioxidant enzymes and osmoregulators, which are conducive to relieving cell membrane damage when subjected to drought and rehydration.

Fertile island variation depends on species differences in the deserts of Northwest China

Desert ecosystems are extremely arid and nutrient poor. “Fertile islands” formed by mobile sand dunes and perennial desert plants are crucial for maintaining the structure and function of these ecosystems. However, the impacts of fertile islands created by different plant species at various spatial locations on soil physicochemical properties such as soil nutrients remain unclear. This study focused on the legumes (Astragalus flexus Fisch.), and non-legume (Eremurus inderiensis (M. Bieb.) Regel) plants widely distributed in the Gurbantunggut Desert in northwestern China. We analyzed the soil physicochemical properties of fertile islands formed by these two desert plants at different horizontal distances (0–140 cm) and vertical depths (0–15 cm). In addition, we investigated the relationship between plant functional shape and soil physicochemical properties. This study yielded the following results. (1) The fertile island was observed within the 0–140 cm soil layer of Astragalus flexus and Eremurus inderiensis and gradually weakened with increasing horizontal distance and soil depth. (2) The two plants had different nutrient enrichment rates. Eremurus inderiensis had higher TP and AK enrichment rates than Astragalus flexus. In contrast, Astragalus flexus demonstrated significantly higher enrichment rates for TN, NH4+-N, and NO3−-N, especially NH4+-N, highlighting the ability of legumes to fix and uptake N. (3) The correlation between plant height, crown width, and soil nutrient enrichment rate was more significant for Eremurus inderiensis than for Astragalus flexus. In general, both plants formed the fertile islands that gradually decreased with the increasing distance (both horizontal and vertical). Different plants exhibited varying abilities to enrich soil nutrients and form fertile islands, which presented a clear species effect. Therefore, protecting the diversity of desert plants to form stable fertile islands could be crucial for maintaining the soil fertility in desert ecosystems.

Effects of trade and poaching pressure on extinction risk for cacti in the Atacama Desert.

In this era of a global biodiversity crisis, vascular plants are facing unprecedented extinction rates. We conducted an assessment of the extinction risk of 32 species and 7 subspecies of Copiapoa, a genus endemic to Chile's fog-dependent coastal Atacama Desert. We applied the International Union for Conservation of Nature Red List Categories and Criteria enhanced by expert insights and knowledge. Our primary aim was to analyze the impact of trade and poaching on their extinction risk. We employed machine learning models, including multinomial logistic regression (MLR), decision tree (DT), and random forest (RF), to analyze the relationships between conservation status and various factors. These factors encompassed trade and poaching activities, landscape condition, human footprint, monthly cloud frequency, and biological traits such as evolutionary distinctiveness and maximum diameter. Seven taxa had an area of occupancy (AOO) of <10km2, 10 additional taxa had an AOO of <20km2, and 16 taxa had an AOO of ≤100km2. This reassessment exposed a critical level of extinction risk for the genus; 92% of the taxa were classified as threatened, 41% as critically endangered, 41% as endangered, and 10% as vulnerable. MLR, DT, and RF exhibited accuracies of 0.784, 0.730, and 0.598, respectively, and identified trade and poaching pressure and landscape condition as the primary drivers of extinction risk. Our assessment of Copiapoa showed trade, poaching, habitat degradation, and their synergic impacts as the main drivers of the genus' extinction risk. Our results highlight the urgent need for nations to develop and enforce strategies to monitor and control trade and poaching pressure because these factors are crucial for the long-term persistence of desert plants.

Variation in Root-Associated Microbial Communities among Three Different Plant Species in Natural Desert Ecosystem.

The process and function that underlie the assembly of root-associated microbiomes may be strongly linked to the survival strategy of plants. However, the assembly and functional changes of root-associated microbial communities in different desert plants in natural desert ecosystems are still unclear. Thus, we studied the microbial communities and diversity of root endosphere (RE), rhizosphere soil (RS), and bulk soil (BS) among three representative desert plants (Alhagi sparsifolia, Tamarix ramosissima, and Calligonum caput-medusae) in three Xinjiang desert regions {Taklimakan (CL), Gurbantünggüt (MSW), and Kumtag (TLF)} in China. This study found that the soil properties {electrical conductivity (EC), soil organic carbon (SOC), total nitrogen (TN) and phosphorus (TP), available nitrogen (AN) and phosphorus (AP)} of C. caput-medusae were significantly lower than those of A. sparsifolia and T. ramosissima, while the root nutrients (TN and TP) of A. sparsifolia were significantly higher compared to C. caput-medusae and T. ramosissima. The beta diversity of bacteria and fungi (RE) among the three desert plants was significantly different. The common OTU numbers of bacteria and fungi in three compartments (RE, RS, and BS) of the three desert plants were ranked as RS > BS > RE. The bacterial and fungal (RE) Shannon and Simpson indexes of C. caput-medusae were significantly lower as compared to those of A. sparsifolia and T. ramosissima. Additionally, bacterial and fungal (RE and RS) node numbers and average degree of C. caput-medusae were lower than those found in A. sparsifolia and T. ramosissima. Root and soil nutrients collectively contributed to the composition of root-associated bacterial (RE, 12.4%; RS, 10.6%; BS, 16.6%) and fungal communities (RE, 34.3%; RS, 1.5%; BS, 17.7%). These findings demonstrate variations in the bacterial and fungal populations across different plant species with distinct compartments (RE, RS, and BS) in arid environments. More importantly, the study highlights how much soil and plant nutrients contribute to root-associated microbial communities.

Distribution, sources, and risk assessment of polycyclic aromatic hydrocarbons in surface soils and plants from industrial and agricultural areas, Junggar Basin, Xinjiang

The contamination characteristics of Polycyclic Aromatic Hydrocarbons (PAHs) in different environmental functional areas are different. In this study, the contamination of PAHs in soils and common plants in typical mining and farmland areas in Xinjiang, China, was analyzed. The results showed that the contamination levels of PAHs in mining soils were significantly higher than those in farmland soils, and the mining soils were dominated by 4-5-ring PAHs and farmland soils by 3-4-ring PAHs. Analysis of their sources using a positive definite factor matrix model showed that PAHs in mining soils mainly originated from coal and natural gas combustion, and transportation processes; while farmland soils mainly came from biomass and coal combustion, and fossil fuel volatile spills. The cancer risk of PAHs in soils was evaluated using a combination of the Monte Carlo and the lifetime carcinogenic risk models, and the results showed that the overall level of cancer risk for mining soils was higher than that for farmland soils, and can put some people in high risk of cancer. For plant samples, except for individual crop samples, the contamination levels of mining plants and crops were similar, with 4-5-ring PAHs dominating in desert plants in mining areas and the highest proportion of 3-ring PAHs in crops in agricultural fields, and PAHs in both plants were mainly from biomass and coal combustion. The results of correlation analysis showed that 2-ring PAHs in crop roots were significantly positively correlated with it in corresponding soils, and some high-ring PAHs in crop leaves were significantly negatively correlated with it in corresponding soils. Therefore, there were significant differences in the pollution characteristics of PAHs in soils and common plants in mining and agricultural areas. Human health risks and ecological risks are mainly concentrated in mining areas, and appropriate intervention measures should be taken for pollution remediation.

A Phylogenetic Model of Established and Enabled Biome Shifts.

Where each species actually lives is distinct from where it could potentially survive and persist. This suggests that it may be important to distinguish established from enabled biome affinities when considering how ancestral species moved and evolved among major habitat types. We introduce a new phylogenetic method, called RFBS, to model how anagenetic and cladogenetic events cause established and enabled biome affinities (or, more generally, other discrete realized versus fundamental niche states) to shift over evolutionary timescale. We provide practical guidelines for how to assign established and enabled biome affinity states to extant taxa, using the flowering plant clade Viburnum as a case study. Through a battery of simulation experiments, we show that RFBS performs well, even when we have realistically imperfect knowledge of enabled biome affinities for most analyzed species. We also show that RFBS reliably discerns established from enabled affinities, with similar accuracy to standard competing models that ignore the existence of enabled biome affinities. Lastly, we apply RFBS to Viburnum to infer ancestral biomes throughout the tree and to highlight instances where repeated shifts between established affinities for warm and cold temperate forest biomes were enabled by a stable and slowly-evolving enabled affinity for both temperate biomes.

Mechanistic insights into Retama raetam's anti-proliferative and pro-apoptotic effects in A549 lung cancer cells: targeting PI3K/Akt pathway and ROS production.

Lung cancer, particularly non-small cell lung cancer (NSCLC), is a leading cause of cancer-related deaths worldwide. This study investigates the molecular mechanisms behind the anti-cancer effects of the tropical desert plant Retama raetam (R. raetam) on the A549 NSCLC cell line. The research examined R. raetam's anti-proliferative effects, cytotoxicity, apoptosis, reactive oxygen species (ROS) generation, mitochondrial membrane potential, and cell morphology in NSCLC A549 and L-132 cells. In addition, the influence of R. raetam on DNA fragmentation, apoptotic signaling, and PI3K/Akt pathways for its anti-cancer mechanism was examined. Our results indicated that R. raetam's effects were dose- and time-dependent to exhibit anti-proliferative effects on A549 cells. R. raetam treatment promoted apoptotic cell death cycle arrest, increased apoptotic cells, depolarized the mitochondrial membrane, and induced morphological alterations in cells and nuclei. It also inhibited A549 cell migration (P < 0.05), colonization, and invasiveness. Moreover, the study demonstrated that R. raetam treatment resulted in the upregulation of Bax expression, downregulation of Bcl-2 expression, and apoptotic fragmented DNA in A549 cells. The top five bioactive compounds derived from R. raetam exhibited molecular interactions that inhibit PIK3CA and AKT1. This inhibition leads to an increased frequency of apoptosis and subsequent death of cancer cells. Additionally, R. raetam extract induced an increase in ROS formation and cytochrome c levels, indicating that its toxic effects on A549 cells involve both ROS-dependent cytotoxicity through the disruption of mitochondrial transmembrane potential ΔΨm and ROS-independent cell cycle arrest through downregulation BCL-2, PARP, E-Cadherin, PI3K, and Akt expressions pathways.

Networking the desert plant microbiome, bacterial and fungal symbionts structure and assortativity in co-occurrence networks

In nature, microbes do not thrive in seclusion but are involved in complex interactions within- and between-microbial kingdoms. Among these, symbiotic associations with mycorrhizal fungi and nitrogen-fixing bacteria are namely known to improve plant health, while providing resources to benefit other microbial members. Yet, it is not clear how these microbial symbionts interact with each other or how they impact the microbiota network architecture. We used an extensive co-occurrence network analysis, including rhizosphere and roots samples from six plant species in a natural desert in AlUla region (Kingdom of Saudi Arabia) and described how these symbionts were structured within the plant microbiota network. We found that the plant species was a significant driver of its microbiota composition and also of the specificity of its interactions in networks at the microbial taxa level. Despite this specificity, a motif was conserved across all networks, i.e., mycorrhizal fungi highly covaried with other mycorrhizal fungi, especially in plant roots—this pattern is known as assortativity. This structural property might reflect their ecological niche preference or their ability to opportunistically colonize roots of plant species considered non symbiotic e.g., H. salicornicum, an Amaranthaceae. Furthermore, these results are consistent with previous findings regarding the architecture of the gut microbiome network, where a high level of assortativity at the level of bacterial and fungal orders was also identified, suggesting the existence of general rules of microbiome assembly. Otherwise, the bacterial symbionts Rhizobiales and Frankiales covaried with other bacterial and fungal members, and were highly structural to the intra- and inter-kingdom networks. Our extensive co-occurrence network analysis of plant microbiota and study of symbiont assortativity, provided further evidence on the importance of bacterial and fungal symbionts in structuring the global plant microbiota network.

Assessing Radiation Fallout in Public Zones near the Nevada National Security Site (NNSS): A Recent Study.

A comprehensive radiological study was conducted in the surrounding public zones of the Nevada National Security Site to identify traces of resuspended radioactivity and heavy elemental contamination that might have resulted from various activities. The study used passive and active nuclear methods, specifically gamma spectrometry and instrumental neutron activation analysis, respectively. Passive gamma spectra analysis of air filter papers from various Community Environmental Monitoring Program stations conclusively verified the presence of radionuclides exclusively originating from the natural decay series of 238U and 232Th. Furthermore, gamma spectrometry and instrumental neutron activation analysis of plant samples from surrounding areas of the Nevada National Security Site revealed the absence of any unusual elemental contamination in the environment. These results demonstrated that there was no measurable radiological impact on the public zones surrounding the site resulting from the spread of radioactive materials or toxic heavy metals associated with previous or ongoing activities at Nevada National Security Site. Therefore, the safety of public zones concerning retained radioactivity and harmful elemental contamination arising from Nevada National Security Site operations is negligible. The significance of this study is further pronounced in the current geopolitical context, as it establishes the baseline elemental composition for various desert plants for future reference.

Reduced diffusional limitations in carnation stems facilitate higher photosynthetic rates and reduced photorespiratory losses compared with leaves.

Green stem photosynthesis has been shown to be relatively inefficient but can occasionally contribute significantly to the carbon budget of desert plants. Although the possession of green photosynthetic stems is a common trait, little is known about their photosynthetic characteristics in non-desert species. Dianthus caryophyllus is a semi-woody species with prominent green stems, which show similar photosynthetic anatomy with leaves. In the present study, we used a combination of gas exchange and chlorophyll fluorescence measurements, some of which were taken under varying O2 and CO2 partial pressures, to investigate whether the apparent anatomical similarities between the species' leaves and stems translate into similar photosynthetic physiology and capacity for CO2 assimilation. Both organs displayed high photosynthetic electron transport rates (ETR) and similar values of steady-state non-photochemical quenching (NPQ), albeit leaves could attain them faster. The analysis of OJIP transients showed that the quantum efficiencies and energy fluxes along the photosynthetic electron transport chain are largely similar between leaves and stems. Stems displayed higher total conductance to CO2 diffusion, similar biochemical properties, significantly higher photosynthetic rates and lower water use efficiency than leaves. Leaf ETR was more sensitive to sub-ambient O2 and super-ambient CO2 partial pressures, while leaves also displayed a higher relative rate of Rubisco oxygenation. We conclude that the highly responsive NPQ and the enhanced photorespiration and WUE in leaves represent photoprotective and water-conserving adaptations to the high incident light intensities they experience naturally, at the expense of higher CO2 assimilation rates, which the vertically orientated stems can readily attain.

Amplified photosynthetic responses to drought events offset the positive effects of warming on arid desert plants

Ongoing warming will influence plant photosynthesis via thermal effects and by enhancing water deficit. As the primary limiting factor for the growth and development of plants in arid deserts, water may alter the potential warming effects on plant photosynthesis and lead to increased uncertainty in plant dynamics. Here, we used open-top chambers (OTCs) to evaluate the impacts of in situ warming (+0.5 and +1.5 °C) on the photosynthesis and growth of two representative desert plants, Artemisia ordosica and Grubovia dasyphylla, from wet to dry spells. The plant traits associated with photosynthetic diffusive and biochemical processes were also measured to explore the underlying mechanisms involved. We found that warming significantly increased the net photosynthetic rate (Anet) during wet spells under 1.5 °C warming in both plants, while only increased that of A. ordosica under 0.5 °C warming. During dry spells, Anet decreased both in A. ordosica and G. dasyphylla, with the rates of declining being 48 % and 41 %, respectively, higher than control under warming. Consequently, warming significantly amplified photosynthetic responses to drought events, which offset the positive warming effects during wet spells and led to unchanged plant biomass in both species. Besides, alterations in plant traits tended to be associated with positive warming effects during wet spells, and the negative effects of drought were mainly due to stomatal limitation. Our results emphasised that the potential benefits of warming during wet spells may be reversed during drought events. Thus, the adverse effects of ongoing warming on desert productivity may increase during dry spells in growing seasons and during dry years.