Plant Microbe Research Articles

Symbiont effector-guided mapping of proteins in plant networks to improve crop climate stress resilience: Symbiont effectors inform highly interconnected plant protein networks and provide an untapped resource for crop climate resilience strategies.

There is an urgent need for novel protection strategies to sustainably secure crop production under changing climates. Studying microbial effectors, defined as microbe-derived proteins that alter signalling inside plant cells, has advanced our understanding of plant immunity and microbial plant colonisation strategies. Our understanding of effectors in the establishment and beneficial outcome of plant symbioses is less well known. Combining functional and comparative interaction assays uncovered specific symbiont effector targets in highly interconnected plant signalling networks and revealed the potential of effectors in beneficially modulating plant traits. The diverse functionality of symbiont effectors differs from the paradigmatic immuno-suppressive function of pathogen effectors. These effectors provide solutions for improving crop resilience against climate stress by their evolution-driven specification in host protein targeting and modulation. Symbiont effectors represent stringent tools not only to identify genetic targets for crop breeding, but to serve as applicable agents in crop management strategies under changing environments.

Carbon and nitrogen stock in soils of subtropical urban forests: Isotopic δ13C and δ15N indicators for nature-based solutions in a megacity

Urban forest soils play a pivotal role in enhancing the environmental sustainability of cities, contributing to various natural processes, including plant–microbe interactions, microbial activity, and the decomposition of organic matter. Consequently, urban forest soils emerge as effective NBS, underscoring their potential to mitigate environmental challenges and foster sustainable urban ecosystems. In these sense, this manuscript aimed at evaluating how soil attributes of the urban forests of São Paulo, Brazil, with different adjacent land uses, influence the capacity to store the excess of C and N from anthropogenic emissions, making this ecosystem an important reservoir of urban anthropogenic emissions. Three hundred urban forest soil samples were collected from the surface to a depth of 50 cm. All samples were analyzed for C and N content (and their stable isotopes). In addition, granulometric tests were also carried out to classify the soils. It was found that the most central forest fragment has the highest C and N contents at all analyzed depths, probably due to the association with physical aspects of soil texture. For all layers, the most central fragment soil sample, the only one with a clay soil, presented approximately twice as many elements when compared to the soil samples of the other sites. In general, C and N stocks (and their stable isotopes, δ13C and δ15N, respectively) varied significantly in forests located in the center-periphery direction (%N - F = 24.58, p < 0.05; %C - F = 22.48, p < 0.05; δ15N - F = 4.27, p < 0.05; δ13C - F = 19.8, p < 0.05; C/N - F = 14.56, p < 0.05). This more central forest fragment with higher vehicle emissions showed greater potential to store these atmospheric elements and with greater neutralizing efficiency than the other forest fragments. δ13C and δ15N contents together with the C:N ratio indicated the efficiency of biogeochemical cycling, through decomposition, in different urban forest fragments. More peripheral fragments showed high efficiency in C and N cycling along the analyzed soil profiles, while in the most superficial layer, the most central fragment was highly efficient. These shed light results how integrating NbS principles into strategic urban planning and city-level climate policies can bolster the effectiveness of urban green areas. The integration not only promotes carbon sequestration and efficient nutrient cycling in the soil but also fosters sustainable practices, contributing to a more resilient urban landscape.

Impacts of biostimulants on crop yield and biological activity under drought conditions

AbstractIntroductionBiostimulants are proposed to have a role in sustainable food production and are being increasingly used strategies to limit the negative effects of drought stress on crop yield and soil health. However, how different biostimulants used alone, or in combination with conventional management approaches affect soil health and crop yield under drought in different soils is not well understood. Here we conducted a glasshouse experiment to investigate this.Materials and MethodsTwo soil types from fields maintained under intensive (IM) and extensive (EM) management practices were used with two commercial biostimulants [Universal Natural Plant food (UNP) and Converte Seed Primer (CSP)] on soil microbial populations and crop yield (lettuce) under well‐watered and drought stressed conditions. We examined the activity and biomass of soil microorganisms as well as seed germination and root and shoot biomass to examine the effect of application of biostimulants on parameters of soil health and crop yield.ResultsBiostimulants generally increased crop yield, basal soil respiration and microbial biomass, with effects stronger in EM soils than in IM soils, but effects on soil enzyme activities were variable. The combined use of biostimulant and inorganic fertiliser negated the benefits of the biostimulant on soil biological properties in some cases. Nevertheless, effects of biostimulants had a positive impact on crop yield with the combined use of soil‐applied and seed applied biostimulants have the greatest impact on plant biomass and also conferring some resistance in both soil microbial communities and plant growth to drought.ConclusionsWhile biomass and activity of the microbial community and plant growth responses to biostimulant additions are both soil and biostimulant dependent, their combined use has potential to aid both plants and maintain promote microbial activity under of drought, compared to conventional fertiliser treatments in extensively managed soils.

Relationship among Soil Biophysicochemical Properties, Agricultural Practices and Climate Factors Influencing Soil Phosphatase Activity in Agricultural Land

Phosphorus (P) is a vital macronutrient crucial for crop productivity. Plants absorb P salts, mainly orthophosphate, from the soil, yet the primary P source resides in organic materials. Acid and alkaline phosphatases (the predominant forms of soil phosphomonoesterases (APases)) are crucial for alleviating P deficiency in plants and play a vital role in releasing P from organic materials via hydrolysis. Our aim was to summarize the direction of the relationship between a variety of influential factors on acid and alkaline phosphatase activity in agricultural lands and identify gaps in knowledge. Our findings indicate a strong linkage between both APases and soil pH, positively influenced by clay content, organic matter, microbial biomass carbon, and nitrogen. Adopting healthy soil practices like balanced organic fertilizer usage, optimal soil water levels, reduced tillage, crop rotation, and using beneficial plant microbes help boost both APase activity. However, the connection between APases and crop productivity remains uncertain due to insufficient research in this area. We identified gaps in knowledge in relation to meso-macrofauna, alongside essential plant nutrients such as potassium, nutrient ratios, and the synergistic effects of various factors on APase response. Understanding the rapid, efficient assimilation of P through APases in the plant-soil and/or plant-microbiota ecosystem it can be crucial for crop productivity and yields.

Modulating root system architecture: cross-talk between auxin and phytohormones.

Root architecture is an important agronomic trait that plays an essential role in water uptake, soil compactions, nutrient recycling, plant-microbe interactions, and hormone-mediated signaling pathways. Recently, significant advancements have been made in understanding how the complex interactions of phytohormones regulate the dynamic organization of root architecture in crops. Moreover, phytohormones, particularly auxin, act as internal regulators of root development in soil, starting from the early organogenesis to the formation of root hair (RH) through diverse signaling mechanisms. However, a considerable gap remains in understanding the hormonal cross-talk during various developmental stages of roots. This review examines the dynamic aspects of phytohormone signaling, cross-talk mechanisms, and the activation of transcription factors (TFs) throughout various developmental stages of the root life cycle. Understanding these developmental processes, together with hormonal signaling and molecular engineering in crops, can improve our knowledge of root development under various environmental conditions.

Root Exudate Metabolites Alter Food Crops Microbiomes, Impacting Plant Biocontrol and Growth

Exuded plant metabolites play an important role in fostering beneficial interactions with the surrounding soil microbiota, thereby helping plants to better adjust to changing environmental conditions. These metabolites act as signals to attract or enhance the colonization of plant roots with specific groups of beneficial microbes and they modulate the dynamics of plant–microbe interactions in fulfilling plant niche-based requirements, directly and/or indirectly. This review emphasizes the expression, levels, modes of action, and net effects of the signaling metabolites that help food crop plants to become colonized by microbes that promote plant growth and development under periods of biotic stress.

Analysis of Marchantia polymorpha-microorganism interactions: basis for understanding plant-microbe and plant-pathogen interactions.

Marchantia polymorpha is a bryophyte gaining significance as a model plant in evolutionary studies in recent years. This is attributed to its small-sequenced genome, standardized transformation methodology, global distribution, and easy and rapid in vitro culturing. As an evolutionary model, M. polymorpha contributes to our understanding of the evolution of plant defensive responses and the associated hormonal signaling pathways. Through its interaction with microorganisms, M. polymorpha serves as a valuable source of knowledge, yielding insights into new microbial species and bioactive compounds. Bibliographic analysis involved collecting, reading, and categorizing documents obtained from the Scopus and Web of Science databases using different search terms. The review was based on 30 articles published between 1995 and 2023, with Japanese and Spanish authors emerging as the most prolific contributors in this field. These articles have been grouped into four main themes: antimicrobial metabolites produced by M. polymorpha; identification and characterization of epiphytic, endophytic, and pathogenic microorganisms; molecular studies of the direct interaction between M. polymorpha and microorganisms; and plant transformation using bacterial vectors. This review highlights the key findings from these articles and identifies potential future research directions.

Efficacy of Plant Growth Promoting Rhizobacteria to Improve the Biochemical Properties and Development of Wheat Seedlings under Drought Stress Control

The most significant cereal crop is wheat, which ranks third among the world's most demanding staple crops after rice and maize. Temperate climates with moderate rainfall are ideal for growing it. Under the current changing climate, abiotic stress conditions, particularly drought conditions, have a significant impact on wheat crop productivity. Plants under drought stress have less water accessible to them, which slows down germination, growth, and yield. In this study, plant growth promoting rhizobacteria (PGPR) is used to boost the drought tolerance capability of the wheat plant. PGPR isolate KD-3B strain is used to investigate the plant growth characteristic such as, mineral solubilization (zinc, phosphate, and potassium), ammonia production, indole acetic acid (IAA), and the enzyme 1-carboxylic acid (ACC). Moreover, the plant showed drought tolerance at polyethylene glycol (PEG 6000) concentrations of 0%, 5%, 10%, 15%, 20%, and 25% (w/v). Wheat seedlings were exposed to both normal and drought conditions when they interacted with the KD-3B bacterial strain, which possesses many features that promote plant development. In comparison to growth in a non-PEG condition, this strain is tested for relative growth up to 41.05% in a 25% PEG concentration. When inoculum of KD-3B bacterial strain used under normal and drought conditions, the relationship between microbes and plants was examine in wheat seedlings grown under hydroponic condition. Under drought stress condition significant changes were observed in the morphological and biochemical conditions of seedlings. This research concluded that, in drought stress condition, PGPR KD-3B strain inoculated seedlings showed increased chlorophyll content, TSS content, malondialdehyde concentration and decreased proline, H2O2 content, SOD and POD activities, as compared to the negative control seedlings. The PGPR stain KD-3B improved their biochemical and physiological parameters and plant microbe interaction decreased the deleterious effect of drought on wheat seedlings.

The beneficial endophytic microbes enhanced tobacco defense system to resist bacterial wilt disease

BackgroundThe vital role of rhizosphere microbiome in protecting plants against pathogen infection has been well characterized. By contrast, beneficial effects of the plant endophytic microbiome and interactions with plants remain poorly understood. Here, we integrated microbial community analysis, culture-based methods and plant defense gene quantification to systematically investigate the responses of endophytic root and stem microbiomes and the defense system of the tobacco plant to Ralstonia solanacearum, a bacterial pathogen causing bacterial wilt disease worldwide.ResultsAn obvious reduction of community diversity and changes of microbial composition were observed in tobacco root and stem compartments upon R. solanacearum infection. Beneficial endophytic microbes were enriched in both diseased root and stem compartments, and beneficial microbes enriched in roots were more diverse than those in stems. Several beneficial bacteria enriched in diseased roots showed positive correlations with the pathogen abundance and exhibited great antagonistic activities against R. solanacearum. At the same time, the expression of key genes participating in plant defense signaling pathways and activities of plant defense enzymes were activated with R. solanacearum infection. Inoculation of beneficial endophyte Burkholderia ASV_550 in soils could greatly enhance the tobacco defense system in the presence of pathogen and decrease the disease incidence.ConclusionsThe recruited beneficial microbes exhibited an enhancement of the defense system of host plants. This work provides endophyte evidence for the “cry for help” strategy in plants and advances the current understanding of plant–microbe interactions in resisting plant disease.Graphical

The Function of Root Exudates in the Root Colonization by Beneficial Soil Rhizobacteria.

Soil-beneficial microbes in the rhizosphere play important roles in improving plant growth and health. Root exudates play key roles in plant-microbe interactions and rhizobacterial colonization. This review describes the factors influencing the dynamic interactions between root exudates and the soil microbiome in the rhizosphere, including plant genotype, plant development, and environmental abiotic and biotic factors. We also discuss the roles of specific metabolic mechanisms, regulators, and signals of beneficial soil bacteria in terms of colonization ability. We highlight the latest research progress on the roles of root exudates in regulating beneficial rhizobacterial colonization. Organic acids, amino acids, sugars, sugar alcohols, flavonoids, phenolic compounds, volatiles, and other secondary metabolites are discussed in detail. Finally, we propose future research objectives that will help us better understand the role of root exudates in root colonization by rhizobacteria and promote the sustainable development of agriculture and forestry.

Moving towards Biofuels and High-Value Products through Phytoremediation and Biocatalytic Processes

Phytoremediation is an eco-friendly technology that utilizes plants and plant–microbe interactions to remove a wide spectrum of organic and inorganic pollutants from contaminated environments such as soils, waters and sediments. This low-impact, environmentally sustainable and cost-effective methodology represents a valuable alternative to expensive physical and chemical approaches, characterized by secondary pollution risks, and is gaining increasing attention from researchers and popular acceptance. In this review, the main mechanisms underlying the decontamination activity of plants have been clarified, highlighting the environmental remediation in fertility and soil health. Studies have illustrated the high potential of phytoremediation coupled with green and sustainable biocatalytic processes, which together represent a non-polluting alternative for the conversion of plant biomass into renewable resources. The convenience of this technology also lies in the valorization of the bio-wastes towards biofuels, energy purposes and value-added products, contributing to an effective and sustainable circular approach to phyto-management. The strategy proposed in this work allows, with the use of totally green technologies, the recovery and valorization of contaminated soil and, at the same time, the production of bioenergy with high efficiency, within the framework of international programs for the development of the circular economy and the reduction of greenhouse carbon emissions.

Flavonoids influence key rhizocompetence traits for early root colonization and PCB degradation potential of Paraburkholderia xenovorans LB400.

Flavonoids are among the main plant root exudation components, and, in addition to their role in symbiosis, they can broadly affect the functionality of plant-associated microbes: in polluted environments, for instance, flavonoids can induce the expression of the enzymatic degradative machinery to clean-up soils from xenobiotics like polychlorinated biphenyls (PCBs). However, their involvement in root community recruitment and assembly involving non-symbiotic beneficial interactions remains understudied and may be crucial to sustain the holobiont fitness under PCB stress. By using a set of model pure flavonoid molecules and a natural blend of root exudates (REs) with altered flavonoid composition produced by Arabidopsis mutant lines affected in flavonoid biosynthesis and abundance (null mutant tt4, flavonoid aglycones hyperproducer tt8, and flavonoid conjugates hyperaccumulator ttg), we investigated flavonoid contribution in stimulating rhizocompetence traits and the catabolic potential of the model bacterial strain for PCB degradation Paraburkholderia xenovorans LB400. Flavonoids influenced the traits involved in bacterial recruitment in the rhizoplane by improving chemotaxis and motility responses, by increasing biofilm formation and by promoting the growth and activation of the PCB-degradative pathway of strain LB400, being thus potentially exploited as carbon sources, stimulating factors and chemoattractant molecules. Indeed, early rhizoplane colonization was favored in plantlets of the tt8 Arabidopsis mutant and reduced in the ttg line. Bacterial growth was promoted by the REs of mutant lines tt4 and tt8 under control conditions and reduced upon PCB-18 stress, showing no significant differences compared with the WT and ttg, indicating that unidentified plant metabolites could be involved. PCB stress presumably altered the Arabidopsis root exudation profile, although a sudden "cry-for-help" response to recruit strain LB400 was excluded and flavonoids appeared not to be the main determinants. In the in vitro plant-microbe interaction assays, plant growth promotion and PCB resistance promoted by strain LB400 seemed to act through flavonoid-independent mechanisms without altering bacterial colonization efficiency and root adhesion pattern. This study further contributes to elucidate the vast array of functions provided by flavonoids in orchestrating the early events of PCB-degrading strain LB400 recruitment in the rhizosphere and to support the holobiont fitness by stimulating the catabolic machinery involved in xenobiotics decomposition and removal.

Trophic regulation of soil microbial biomass under nitrogen enrichment: A global meta‐analysis

Abstract Eutrophication, including nitrogen (N) enrichment, can affect soil microbial communities through changes in trophic interactions. However, a knowledge gap still exists about how plant resources (‘bottom‐up effects’) and microbial predators (‘top‐down effects’) regulate the impacts of N enrichment on microbial biomass at the global scale. To address this knowledge gap, we conducted a global meta‐analysis using 2885 paired observations from 217 publications to evaluate the regulatory effects of plant biomass and soil nematodes on soil microbial biomass under N enrichment across terrestrial ecosystems. We found that the effects of N enrichment on soil microbial biomass varied strongly across ecosystems. N enrichment decreased the soil microbial biomass of natural grasslands and forests due to soil acidification and the subsequent losses of predatory and microbivorous nematodes stimulating microbial growth. By contrast, N enrichment increased the microbial biomass of managed croplands mainly via increasing plant biomass production. Across diverse ecosystems, the short‐term N enrichment (experimental duration ≤5 years) could reduce microbial biomass via decreasing nematode abundance, whereas the long‐term N enrichment (experimental duration &gt;5 years) mainly promoted microbial biomass via increasing plant biomass. These findings highlight the critical roles of microbial predators and plant input in shaping microbial responses to N enrichment, which are highly dependent on ecosystem type and the period of N enrichment. Earth system models that predict soil microbial biomass and their linkages to soil functioning should consider the variations in plant biomass and soil nematodes under future scenarios of N deposition. Read the free Plain Language Summary for this article on the Journal blog.

Light Intensity Modulates the Functional Composition of Leaf Metabolite Groups and Phyllosphere Prokaryotic Community in Garden Lettuce (Lactuca sativa L.) Plants at the Vegetative Stage.

Light intensity primarily drives plant growth and morphogenesis, whereas the ecological impact of light intensity on the phyllosphere (leaf surface and endosphere) microbiome is poorly understood. In this study, garden lettuce (Lactuca sativa L.) plants were grown under low, medium, and high light intensities. High light intensity remarkably induced the leaf contents of soluble proteins and chlorophylls, whereas it reduced the contents of leaf nitrate. In comparison, medium light intensity exhibited the highest contents of soluble sugar, cellulose, and free amino acids. Meanwhile, light intensity resulted in significant changes in the composition of functional genes but not in the taxonomic compositions of the prokaryotic community (bacteria and archaea) in the phyllosphere. Notably, garden lettuce plants under high light intensity treatment harbored more sulfur-cycling mdh and carbon-cycling glyA genes than under low light intensity, both of which were among the 20 most abundant prokaryotic genes in the leaf phyllosphere. Furthermore, the correlations between prokaryotic functional genes and lettuce leaf metabolite groups were examined to disclose their interactions under varying light intensities. The relative abundance of the mdh gene was positively correlated with leaf total chlorophyll content but negatively correlated with leaf nitrate content. In comparison, the relative abundance of the glyA gene was positively correlated with leaf total chlorophyll and carotenoids. Overall, this study revealed that the functional composition of the phyllosphere prokaryotic community and leaf metabolite groups were tightly linked in response to changing light intensities. These findings provided novel insights into the interactions between plants and prokaryotic microbes in indoor farming systems, which will help optimize environmental management in indoor farms and harness beneficial plant-microbe relationships for crop production.

Response of L. Scoparium and K. Robusta to biosolids and dairy shed effluent application in a low fertility soil

Biosolids and Dairy Shed Effluent (DSE) can contain high concentrations of plant nutrients, making them potential resources for enhancing forest tree species growth and soil fertility. This study aimed to investigate the effects of biosolids and DSE application on the growth and nutrient uptake of Leptospermum scoparium and Kunzea robusta, while also considering the potential accumulation of contaminants. The results demonstrated that amending low-fertility soil with 2600 kg N ha-1 of biosolids and 200 kg N ha-1 of DSE positively influenced the growth of both L. scoparium and K. robusta. This improvement was evident through increased biomass production and enhanced uptake of essential elements such as calcium (Ca), potassium (K), and sulfur (S). Notably, L. scoparium exhibited superior growth when combined with DSE, while both species showed similar positive responses when combined with biosolids. However, it should be noted that the application of biosolids resulted in elevated concentrations of certain trace elements in the plants, whereas DSE did not. These trace elements included cadmium (Cd), copper (Cu), manganese (Mn), and zinc (Zn). Despite the increase, the levels of these elements did not exceed unacceptable thresholds. Considering the potential influence of biosolids on plant rhizodeposition, it is recommended that future studies investigate the interactions between plant roots and microbes, particularly in relation to plant element uptake. This line of research would further enhance our understanding of the underlying mechanisms involved. In conclusion, the findings suggest that the application of biosolids and DSE can effectively improve forest tree growth and nutrient uptake. However, careful management is necessary to mitigate the potential accumulation of trace elements. These results provide valuable insights for optimizing the use of biosolids and DSE in forestry practices, with potential economic and environmental benefits.

Testing plant growth promoting microorganisms in the field - a proposal for standards.

In the European Union and worldwide there are a burgeoning markets for plant growth promoting microorganisms (PGPM) and other biological agents as soil improvers, bio-fertilizers, plant bio-stimulants, and biological control agents or bio-pesticides. Microbial agents have a major share in this development. The use of such products is often advertised with the promise of contributing to sustainable agricultural practices by increasing crop growth and yield and offering an alternative or substitute to decrease the dependency of agriculture on hazardeous agrochemicals. In contrast to registered microbial plant protection products, PGPM that are marketed in the EU as soil improvers or plant biostimulants, are not strictly required to have proven minimum efficacy levels under field conditions. Manufacturers only have to ensure that these products do not pose unacceptable risks to human, animal or plant health, safety or the environment. Uniform guidelines comparable to the EPPO - standards (European and Mediterranean Plant Protection Organisation) to test the efficacy in field trials are not available. This paper attempts to fill the gap. It proposes guidelines for PGPM field trial design and implementation, as well as recommendations for the type and scope of data collection and evaluation. Selected research papers from literature were evaluated to analyze, whether and to what extent the requirements are already met. The majority of the papers had a clear experimental design followed by proper data evaluation. Frequent deficiencies were the low number of tested environments and crop species, insufficient site and agronomic management description and missing data on soil humidity and temperature. Using the suggested standards is assumed to increase the expressive power of tested microbial products.

Perspectives on the misconception of levitating soil aggregates

Abstract. Soil aggregation is an important process in nearly all soils across the globe. Aggregates develop over time through a series of abiotic and biotic processes and interactions, including plant growth and decay, microbial activity, plant and microbial exudation, bioturbation, and physicochemical stabilization processes, and are greatly influenced by soil management practices. Together, and through feedback with organic matter and primary soil particles, these processes form dynamic soil aggregates and pore spaces, which jointly constitute a soil's structure and contribute to overall soil functioning. Nevertheless, the concept of soil aggregates is hotly debated, leading to confusion about their function or relevancy to soil processes. We argue here that the opposition to the concept of soil aggregation likely stems from the fact that the methods for the characterization of soil aggregates have largely been developed in the context of arable soils, where tillage promotes the formation of distinct soil aggregates that are easily visible in the topsoil. We propose that the widespread use of conceptual figures showing detached and isolated aggregates can be misleading and has contributed to the skepticism towards soil aggregates. However, the fact that we do not always see discrete aggregates within soils in situ does not mean that aggregates do not exist or are not relevant to the study of soil processes. Given that, by definition, soil aggregates consist of any group of soil particles that cohere more strongly to each other than neighboring particles, aggregates may, but do not necessarily need to be, bordered by pore space. Here, we illustrate how aggregates can form and dissipate within the context of undisturbed, intact soils, highlighting the point that aggregates do not necessarily need to have a discrete physical boundary and can exist seamlessly embedded in the soil. We hope that our contribution helps the debate on soil aggregates and supports the foundation of a shared understanding on the characterization and function of soil structure.

Regulation of nitric oxide by phytoglobins in Lotus japonicus is involved in mycorrhizal symbiosis with Rhizophagus irregularis

Various reactive molecular species are generated in plant–microbe interactions, and these species participate in defense and symbiotic responses. Leguminous plants successfully establish symbiosis by maintaining an appropriate level of nitric oxide (NO), which is generated in the roots and nodules during root nodule symbiosis. Phytoglobin (plant hemoglobin) controls NO levels in plants. In this study, we investigated mycorrhizal symbiosis, which occurs in more than 80% of land plants, between Rhizophagus irregularis and Lotus japonicus to clarify the involvement of phytoglobin-mediated NO regulation. The mycorrhizae of L. japonicus exhibited higher NO levels in the presence of R. irregularis than in its absence, especially at the infection site. LjGlb1–1, a phytoglobin that regulates NO level in L. japonicus, was upregulated during symbiosis with R. irregularis. In transformed hairy roots carrying the ProLjGlb1–1:GUS construct, LjGlb1–1 expression was observed at the R. irregularis infection site. We further examined the symbiotic phenotypes of L. japonicus lines with high and low LjGlb1–1 expression with R. irregularis. During mycorrhizal symbiosis, the high LjGlb1–1 expression line exhibited better growth than the wild-type, whereas the low expression line exhibited poor growth. In addition, the expression of LjPT4, a phosphate transporter specific to mycorrhizal symbiosis, was higher in the high LjGlb1–1 expression line, whereas that of the tubulin gene of R. irregularis was lower in the low LjGlb1–1 expression line than in the wild-type. These results confirm that NO regulation by LjGlb1–1 is involved in mycorrhizal symbiosis in L. japonicus, as it is reportedly in nitrogen-fixing symbiosis.

Survey of Rice Genotypes of Southern India for Seed Zinc Concentration to Explore its Seed Endophytic Microbial Diversity

Background: Rice is a vital staple food for a large part of the global population and zinc deficiency poses health risks, particularly in rice-dependent regions. Studying genotypic differences in rice seed zinc content is vital for breeding zinc enriched varieties to address malnutrition and enhance food security. In the plant microbe partnership exploring the role of seed bacterial endophytes in influencing the plant physiology holds promise for Zn accumulation contributing to the broader goals of enhancing food quality, nutrition and crop production in a world facing increasing agricultural demands and challenges. Methods: Rice genotypes were surveyed and their seed zinc content was analysed using non-destructive X-ray fluorescence spectrometry. Surface sterilization of rice seed samples was performed to isolate endophytic bacteria, involving a series of treatments with distilled water, ethanol and sodium hypochlorite to remove surface microflora. The sterilized seeds were then macerated and diluted to obtain a countable number of colonies, which were subsequently spread-plated on nutrient agar, tryptic soy agar and soil extract agar to enumerate the different nutritional types of seed endophytic microflora. Result: In this study, 34 different rice genotypes, comprising traditional landraces and modern cultivars, were collected and analysed for their inherent zinc content. One variety in each category of low, medium and high seed Zn content was selected. The occurrence of all nutritional types of bacterial and their population was highest in the genotype Karuppunel followed by CO51 and ADT 39. Nutrient agar was found to promote a higher count of culturable bacterial endophytes compared to Tryptic soy agar and Soil extract agar.

Impact of nematode infestation in livestock production and the role of natural feed additives – A review

Abstract Efforts to mitigate production losses in small stock due to nematode infestation have birthed the emergence of several control methods as alternatives to chemical-based anthelmintics or to complement them. This results from the recent development of multiple resistance by many parasitic nematodes to anthelmintic drugs. Many of these complementary alternatives, such as breeding resistance, grazing land management, use of predators, and vaccines, have shown the potential to alleviate this menace. Still, some are expensive or require a lot of technicalities. Controlling nematode infestation using natural feed additives has demonstrated effectiveness on the disease under natural conditions. Natural feed additives are environmentally friendly and often do not have health implications for animals and humans. They are readily available, especially to poor-resource farmers; some could be relatively cheap. Therefore, this article reviews the use of naturally available alternative anthelmintics such as plant extracts, clay, microbes, herbs, spices, and organic acids in mitigating the impacts of nematode infestations in small ruminant production.