Plant Health Research Articles

Diurnal Rhythmicity in the Rhizosphere Microbiome—Mechanistic Insights and Significance for Rhizosphere Function

ABSTRACTThe rhizosphere is a key interface between plants, microbes and the soil which influences plant health and nutrition and modulates terrestrial biogeochemical cycling. Recent research has shown that the rhizosphere environment is far more dynamic than previously recognised, with evidence emerging for diurnal rhythmicity in rhizosphere chemistry and microbial community composition. This rhythmicity is in part linked to the host plant's circadian rhythm, although some heterotrophic rhizosphere bacteria and fungi may also possess intrinsic rhythmicity. We review the evidence for diurnal rhythmicity in rhizosphere microbial communities and its link to the plant circadian clock. Factors which may drive microbial rhythmicity are discussed, including diurnal change in root exudate flux and composition, rhizosphere physico‐chemical properties and plant immunity. Microbial processes which could contribute to community rhythmicity are considered, including self‐sustained microbial rhythms, bacterial movement into and out of the rhizosphere, and microbe‐microbe interactions. We also consider evidence that changes in microbial composition mediated by the plant circadian clock may affect microbial function and its significance for plant health and broader soil biogeochemical cycling processes. We identify key knowledge gaps and approaches which could help to resolve the spatial and temporal variation and functional significance of rhizosphere microbial rhythmicity. This includes unravelling the factors which determine the oscillation of microbial activity, growth and death, and cross‐talk with the host over diurnal time frames. We conclude that diurnal rhythmicity is an inherent characteristic of the rhizosphere and that temporal factors should be considered and reported in rhizosphere studies.

Endophytic bacteria: a sustainable strategy for enhancing medicinal plant cultivation and preserving microbial diversity.

Endophytic bacteria, part of the plant microbiome, hold significant potential for enhancing the cultivation and sustainability of medicinal plants (MPs). These microbes are integral to many plant functions, including growth promotion, nutrient acquisition, and resistance to biotic and abiotic stresses. However, traditional cultivation practices often overlook the importance of these beneficial microbes, leading to reduced crop yields, lower phytochemical quality, and increased susceptibility to diseases. The domestication of MPs and the use of chemical fertilizers disrupt the natural microbial diversity in soils, essential for the health and productivity of plants. This disruption can lead to the loss of beneficial plant-microbe interactions, which are vital for the production of bioactive compounds with therapeutic properties. Recent advances in microbiome research, supported by omics technologies, have expanded our understanding of how endophytic bacteria can be leveraged to enhance MP productivity and quality. Endophytic bacteria can directly boost MP productivity by promoting plant growth and health or indirectly by restoring healthy soil microbiomes. They can also be harnessed as microbial factories to produce valuable natural compounds, either by transforming plant-derived precursors into bioactive substances or by synthesizing unique metabolites that mimic MP secondary metabolites. This offers a sustainable and low-cost alternative to traditional MP cultivation, reducing the carbon footprint and preserving endangered species. In conclusion, integrating microbiome research with traditional agricultural practices could revolutionize MP cultivation. By focusing on the microbial component, particularly endophytes, we can develop more sustainable and productive methods for cultivating these plants, ultimately contributing to biodiversity conservation and the production of high-value natural products.

Systematic Review of Air Pollution in Ethiopia: Focusing on Indoor and Outdoor Sources, Health, Environment, Economy Impacts and Regulatory Frameworks

The varied geography (Bekele, 1996) and rapid economic growth of Ethiopia (World Bank, 2020) might have impact its air pollution patterns, with topography, elevation, and climate variability (Lemma Gonfa, 1996) playing significant roles. Environmental challenges, including deforestation and climate change, also affect air quality. This study offers a systematic review of air pollution research in Ethiopia, providing a thorough analysis of its health, environmental, and economic impacts, regional variations, and policy suggestions. It addresses both indoor and outdoor air pollution, assessing their wide-ranging effects. Data were gathered through an extensive search of peer-reviewed articles, policies, and guidelines using Google Scholar and reputable sources, following PRISMA guidelines. The review highlights critical sources of air pollution in Ethiopia, including indoor biomass fuel combustion and outdoor emissions from traffic and industries. Indoor air pollution, particularly from traditional biomass fuels like wood and dung, affects rural and peri-urban areas, leading to high levels of particulate matter and carbon monoxide. Outdoor pollution, driven by urbanization, industrial expansion, and vehicle emissions, worsens health issues and environmental damage. The study identifies severe health consequences, such as respiratory infections and cardiovascular diseases, with air pollution contributing to premature deaths and rising healthcare costs. Economic analysis highlights the significant costs related to healthcare, lost productivity, and infrastructure damage. Environmental impacts include harm to plant health, soil degradation, and contributions to climate change. Despite initiatives to improve air quality monitoring and regulation, challenges persist due to outdated policies, limited infrastructure, and insufficient data. The study emphasizes the need for more comprehensive research and regulations to tackle air pollution crisis.

Effectiveness of Commercial Plant Extracts in Management of Plutella xylostella (Lepidoptera: Plutellidae) on Broccoli in Mexico1

Plutella xylostella (L.) (Lepidoptera: Plutellidae) is the primary pest of broccoli (Brassica oleracea var. italica von Plenck), and it holds the distinction of having the highest number of documented cases of insecticide resistance among insect pests, which complicates its management. The utilization of plant extracts is considered an alternative approach. Therefore, this study aimed to determine the efficacy of commercial plant extracts for the control of P. xylostella. Nine commercial extract products were evaluated, and their effects were compared with Inex-A® + distilled water (control group) and Exalt® (commercial control). Toxicity assays were conducted using third-instar larvae by topical application bioassay. Oviposition inhibition was assessed along with adult female repellency by exposing females to treated surfaces. To determine the residual effect on feeding and oviposition inhibition, third-instar larvae and 3- to 6-d-old adult females were used, respectively, with residual effects measured at 2, 4, 6, 8, and 10 d postapplication. Nimicide 80 (Ultraquimia, Morelos, Mexico) exhibited a mortality rate of 35% of third-instar larvae. Garlimax (Plant Health Care, Azcapotzalco, Mexico) inhibited oviposition by 80%, and demonstrated 85% repellency. The residual effect of Garlimax persisted for 4 d, resulting in a reduced percentage of the consumed area and egg oviposition. The findings of this research highlight the effectiveness of these two products, Nimicide 80 and Garlimax; however, field evaluations are recommended to verify the consistency of their biological effects.

Response of Yields, Soil Physiochemical Characteristics, and the Rhizosphere Microbiome to the Occurrence of Root Rot Caused by Fusarium solani in Ligusticum chuanxiong Hort.

Ligusticum chuanxiong Hort. is considered an important medicinal herb with extremely high economic value and medicinal value due to its various effects, including anti-oxidation, sedative action, hepatoprotection, and invigorating blood circulation. However, L. chuanxiong cultivation is hampered by various plant diseases, especially the root rot caused by Fusarium solani, hindering the sustainable development of the L. chuanxiong industry. The occurrence of soil-borne diseases is closely linked to imbalances in the microbial community structure. Here, we studied the yields, rhizosphere microbiota, and soil physiochemical characteristics of healthy and diseased L. chuanxiong plants affected by root rot with high-throughput sequencing and microbial network analysis, aiming to explore the relationships between soil environmental factors, microbiomes, and plant health of L. chuanxiong. According to the results, L. chuanxiong root rot significantly decreased the yields, altered microbial community diversity and composition, enriched more pathogenic fungi, recruited some beneficial bacteria, and reduced microbial interaction network stability. The Mantel test showed that soil organic matter and pH were the major environmental factors modulating plant microbiome assembly. The root rot severity was significantly affected by soil physiochemical properties, including organic matter, cation exchange capacity, available nitrogen, phosphorus, potassium, and pH. Furthermore, two differential microbes that have great potential in the biocontrol of L. chuanxiong root rot were dug out in the obtained results, which were the genera Trichoderma and Bacillus. This study provided a theoretical basis for further studies revealing the microecological mechanism of L. chuanxiong root rot and the ecological prevention and control of L. chuanxiong root rot from a microbial ecology perspective.

Advancements in Hydroponic Systems: A Comprehensive Review

Hydroponics, the practice of growing plants without soil using mineral nutrient solutions in water, represents a significant shift in agricultural methodologies. Modern hydroponic systems have evolved substantially since the early 20th century, with advancements in system design, automation, nutrient management, and environmental control enhancing efficiency, scalability, and applicability. This review examines recent innovations that have addressed traditional challenges and created new opportunities for hydroponic cultivation. Hydroponics offers advantages over traditional soil-based agriculture, including precise nutrient control, reduced water usage, and the elimination of soil-borne diseases and pests. These benefits are critical in addressing modern agricultural challenges such as soil degradation, water scarcity, and the need for increased food production for a growing global population. Hydroponic systems can be implemented in diverse environments, making them adaptable solutions for enhancing food security and sustainability. Key developments in various hydroponic systems are highlighted, including the Nutrient Film Technique (NFT), Deep Water Culture (DWC), Ebb and Flow, Aeroponics, Wick Systems, and Drip Systems. Innovations in these systems focus on optimizing nutrient delivery, oxygenation, and integrating sensors for precise control, improving overall performance and yield. Technological advancements, such as automation and control systems, sensors, and monitoring technologies, have revolutionized hydroponic farming by enabling real-time data collection and environmental management. The integration of the Internet of Things (IoT) and smart farming practices, combined with data analytics and machine learning, has further optimized system performance and decision-making. LED lighting and vertical farming techniques have maximized space utilization and improved crop yields, particularly in urban environments. Advances in nutrient solutions, disease management, and water quality have optimized plant health and resource efficiency. Economic and environmental considerations, including cost-benefit analyses and comparisons with traditional agriculture, highlight the potential for hydroponics to offer better returns on investment and reduce environmental impact. Despite the significant progress, challenges such as high initial setup costs and technical complexities remain. Future research opportunities and interdisciplinary collaborations are essential to address these challenges and drive further innovation in hydroponic farming.

Plant Growth Promoting Microorganisms and Emerging Biotechnological Approaches for Sugarcane Disease Management

Sugarcane (Saccharum officinarum L.) is a highly valuable agricultural crop, cultivated globally in tropical and subtropical regions, primarily for its sugar content. Out of the 110 countries that grow sugarcane, India and Brazil together account for half of the world’s total production. Being an annual crop, it is prone to many diseases. The major diseases that can affect the sugarcane are red rot, wilt, sett rot, grassy shoot and pokkah boeng. Among the diseases Colletotrichum falcatum, Fusarium sacchari, Ceratocystis paradoxa, Candidatus Phytoplasma and Fusarium fujikuroi pathogen leads to more yield loss. Traditional disease management strategies, such as chemical treatments, conventional methods and biological control, offer limited protection throughout the crop cycle and raise concerns regarding environmental impact and sustainability. In recent years, plant growth-promoting microorganisms (PGPMs) have emerged as a promising alternative, offering environmentally friendly solutions to enhance plant health and manage diseases. RNAi has been explored to manage various diseases caused by viruses, fungi, and bacteria. By silencing key pathogenicity genes in the causal organisms, sugarcane mosaic virus (SCMV), smut, and leaf scald. The integration of PGPMs with RNAi emerging biotechnological tools and transcriptomics presents a sustainable approach to disease control, potentially reducing the dependency on chemical pesticides and promoting eco-friendly agricultural practices.

Can nanotechnology and genomics innovations trigger agricultural revolution and sustainable development?

At the dawn of new millennium, policy makers and researchers focused on sustainable agricultural growth, aiming for food security and enhanced food quality. Several emerging scientific innovations hold the promise to meet the future challenges. Nanotechnology presents a promising avenue to tackle the diverse challenges in agriculture. By leveraging nanomaterials, including nano fertilizers, pesticides, and sensors, it provides targeted delivery methods, enhancing efficacy in both crop production and protection. This integration of nanotechnology with agriculture introduces innovations like disease diagnostics, improved nutrient uptake in plants, and advanced delivery systems for agrochemicals. These precision-based approaches not only optimize resource utilization but also reduce environmental impact, aligning well with sustainability objectives. Concurrently, genetic innovations, including genome editing and advanced breeding techniques, enable the development of crops with improved yield, resilience, and nutritional content. The emergence of precision gene-editing technologies, exemplified by CRISPR/Cas9, can transform the realm of genetic modification and enabled precise manipulation of plant genomes while avoiding the incorporation of external DNAs. Integration of nanotechnology and genetic innovations in agriculture presents a transformative approach. Leveraging nanoparticles for targeted genetic modifications, nanosensors for early plant health monitoring, and precision nanomaterials for controlled delivery of inputs offers a sustainable pathway towards enhanced crop productivity, resource efficiency, and food safety throughout the agricultural lifecycle. This comprehensive review outlines the pivotal role of nanotechnology in precision agriculture, emphasizing soil health improvement, stress resilience against biotic and abiotic factors, environmental sustainability, and genetic engineering.

Comparative Multi-Omics Survey Reveals Novel Specialized Metabolites and Biosynthetic Gene Clusters Under GacS Control in Pseudomonas donghuensis Strain SVBP6.

In Pseudomonas donghuensis SVBP6, isolated from an agricultural field, the well-conserved Gac-Rsm pathway upregulates biosynthesis of the antifungal compound 7-hydroxytropolone (7-HT). However, 7-HT does not fully explain the strain's Gac-Rsm-dependent antimicrobial activity. Here, we combined comparative transcriptomic, proteomic, and metabolomic approaches to identify novel GacS-dependent biosynthetic gene clusters (BGC) and/or extracellular specialized metabolites. Our data revealed a broad impact of GacS on gene expression and extracellular metabolite profile of SVBP6. At both the mRNA and polypeptide levels, specialized metabolism was the main affected functional category in the gacS mutant. The major extracellular MS/MS spectral families promoted by GacS were fatty acid amides, fatty acids, and alkaloids. GacS was required for the production of the antimicrobial compound pseudoiodinine and to activate expression of the corresponding BGC. We also detected GacS-dependent production of 2,3,4-trihydro-β-carboline-1-one, which may add to the antimicrobial arsenal of SVBP6. Furthermore, transcriptomics and proteomics pinpointed several GacS-activated BGCs that had escaped in silico genome mining tools. Altogether, comparative multi-omics analyses of gacS loss-of-function mutants in Pseudomonas isolates are a promising strategy to uncover bioactive metabolites and/or their BGCs. Discovery of novel natural products is important for harnessing the potential of microbiota to improve crop plant growth and health.

Wild again: recovery of a beneficial Cannabis seed endophyte from low domestication genotypes

BackgroundBeyond carrying the plant embryo, seeds harbour intricate microbial communities whose transmission across successive plant generations can significantly influence the ecological and evolutionary dynamics of plant–microbe symbioses. The process of plant domestication has potential repercussions in genes involved in plant-microbiome interactions. However, the extent to which breeding can impact the seed microbiome is sparsely explored. Cannabis is a high-value crop but sparsely subjected to agricultural innovations established in other crop species during the last century. Here, we conduct a large-scale analysis of the bacterial seed microbiome of Cannabis across different domestication grades and investigate the potential of seed-associated endophytes as plant growth-promoting agents under both controlled and field conditions.ResultsAnalysis of Cannabis seed endophyte composition and diversity across 46 plant genotypes revealed 813 different bacterial genera with a predominance of Gammaproteobacteria, Bacilli, Actinobacteria and Alphaproteobacteria but a genotype-specific microbiome. The assessment of domestication and breeding on microbial assembly revealed a higher bacterial diversity in low domestication genotypes (Shannon index, H′: 1.21 vs. 1.05) and a higher homogeneity in bacterial composition caused by line development. Further, a seed bacterial isolate (Bacillus frigoritolerans C1141) associated with low domestication genotypes, and with genes associated with bio-fertilization, bioremediation and phytohormone production, increased plant growth by 42.3% at the time of harvest, under field conditions.ConclusionThis study addresses critical knowledge gaps related to the assembly of the Cannabis seed-endophytic microbiome. It reveals that Cannabis breeding is linked to alterations of seed microbial communities, which potentially led to the loss of bacteria with functional significance. These results highlight the importance of preserving seed microbiomes in plant breeding to support sustainable plant health and growth enhancement in Cannabis.CAHvc7HPtw2foEoMit4yw-Video

Response of the Endophytic Microbiome in Cotinus coggygria Roots to Verticillium Wilt Infection.

Verticillium wilt caused by Verticillium dahliae Kleb. is a lethal soil-borne fungal disease of Cotinus coggygria. The plant endophytic microbiome plays an important role in maintaining plant health and disease resistance, but it is unclear how the endophytic microbiome of C. coggygria roots varies in response to Verticillium wilt occurrence. In this study, the endophytic microbial diversity, community composition, dominant species, and co-occurrence network of C. coggygria under Verticillium wilt-affected and healthy conditions were assessed using Illumina sequencing. Compared with healthy plants, the bacterial alpha diversity indices of Verticillium wilt-affected plants decreased significantly, while the fungal alpha diversity indices showed obvious increases. The relative abundance of dominant taxa including Proteobacteria, Actinobacteriota, Ascomycota, and Basidiomycota at the phylum level, as well as Gammaproteobacteria, Thermoleophilia, Dothideomycetes, and Agaricomycetes at the class level, differed significantly between Verticillium wilt-affected and healthy plants. Co-occurrence networks revealed that the fungal network of Verticillium wilt-affected roots was denser with more negative interactions, which may be relevant to functional changes from reciprocity to competition in the microbial community, in response to V. dahliae infection. The results enhanced our understanding on the relationships between the endophytic microbiome and Verticillium wilt, which could provide information for the management of this disease in C. coggygria.

Cultivar-dependent differences in plant bud microbiome and functional gene pathways in woody plants commonly used in urban green space.

Plant richness and microbiota have been associated with plant health; hardly any studies have investigated how plant taxa differs in microbiota in the context of human health. We investigated the microbial differences in buds of 83 woody plant taxa used in urban green spaces in hemiboreal climate, using 16S rRNA and whole metagenome shotgun sequencing. Bud microbial community was the richest in Cotoneaster Nanshan and C. integerrimus, and Malus domestica cultivars 'Sandra' and 'Lobo' and poorest in Ribes glandulosum. Metagenomic shotgun sequencing of two M. domestica and four Ribes varieties confirmed differences in taxa in bud microbiota and indicated higher siderophore synthesis in Malus. Microbial richness, including bacteria, archaea and viruses, and functional richness of gene pathways was higher in Malus compared to Ribes. The ten most abundant amplicon sequence units, often referred as species, belonged to the phylum Proteobacteria. The differences between plant taxa were evident in classes Alpha- and Gammaproteobacteria, known for potential human health-benefits. Since environmental microbiota contributes to human microbiota and immunoregulation, horticultural cultivars hosting rich microbiota may have human health benefits. Further studies are needed to confirm the effectiveness of microbially-oriented plant selection in optimizing human microbiota and planetary health.

Effect of organic farming on root microbiota, seed production and pathogen resistance in winter wheat fields

Societal Impact StatementAgricultural intensification is a major driver of biodiversity decline in agrosystems. For instance, it has been shown that conventional farming leads to a decline in soil microbial diversity and triggers a strong selection process, altering the functioning of the whole ecosystem. The present study shows that organic farming increases diversity and affects composition of crop plant microbiota, mostly as a response to field management and soil characteristics. Furthermore, crop plant microbiota influences crop production and resistance to pathogens. Therefore, agricultural practices affect plant performance through microorganism‐mediated changes, which may be important pillars of future sustainable crop production.Summary Agricultural intensification threatens biodiversity, but the effects of intensification on microorganisms are still overlooked despite their role in ecosystem functioning. Microorganisms associated with plants provide many services that affect plant growth and health. Organic farming is expected to strongly affect species composition, richness, and their interactions. We analyzed the effect of the farming system on endophytic microbial assemblages associated with winter wheat plants and plant performance in the field. We collected environmental data through farmer interviews, soil analyses, and plant inventories and analyzed root microbiota at vegetative and flowering stages. Organic farming increased fungal and bacterial diversity associated to wheat plants and affected species composition in most phyla. This effect was mostly due to soil characteristics and field management and a little to plant diversity in the field. Microbial responses were more pronounced at the late developmental stage, likely as a result of accumulative effect of management actions during plant development. Seed production and resistance to pathogens were related to specific phyla that are important for seed production and/or wheat resistance to septoriose. This work advances our understanding of how agricultural practices affect plant performance through microorganism‐mediated changes and supports the use of microorganisms as pillars of sustainable crop production.

Enhanced antiviral defense against begomoviral infection in Nicotiana benthamiana through strategic utilization of fluorescent carbon quantum dots to activate plant immunity

BackgroundOwing to their unique physiochemical properties, low toxicity, antipathogenic effects and tunability, fluorescent carbon quantum dots (CQDs) represent a new generation of carbon-based nanomaterials. Despite the mounting research on the efficacy of CQDs against resilient plant pathogens, their potential ability to mitigate viral pathogens and the underlying molecular mechanism(s) remain understudied. In this study, we optimized the CQDs to maximize their antiviral effects against a highly pathogenic Begomovirus (cotton leaf curl Multan virus, CLCuMuV) and elucidated the mechanistic pathways associated with CQDs-mediated viral inhibition. To fine-tune the CQDs-induced antiviral effects against CLCuMuV and investigate the underlying molecular mechanisms,we used HR-TEM, XRD, FT-IR, XPS, and UV‒Vis spectrophotometry to characterize the CQDs. SPAD and FluorCam were used for physiological and photosynthetic performance analysis. Transcriptome, RT‒qPCR, integrated bioinformatics and molecular biology were employed to investigate gene expression, viral quantification and data validation.ResultsThe application of fluorescent, hexagonal crystalline, UV-absorptive and water-soluble CQDs (0.01 mg/ml) significantly reduced the CLCuMuV titer and mitigated viral symptoms in N. benthamiana at the early (5 dpi) and late (20 dpi) stages of infection. CQDs significantly increased the morphophysiological properties, relative chlorophyll contents and photosynthetic (Fv/Fm, QY_max, NPQ and Rfd) performance of the CLCuMuV-infected plants. While CLCuMuV infection disrupted plant immunity, the CQDs improved the antiviral defense response by regulating important immunity-related genes involved in endocytosis/necroptosis, Tam3-transposase, the ABC transporter/sphingolipid signaling pathway and serine/threonine protein kinase activities. CQDs potentially triggered TSS and TTS alternative splicing events in CLCuMuV-infected plants.ConclusionsOverall, these findings underscore the antiviral potential of CQDs, their impact on plant resilience, and their ability to modulate gene expression in response to viral stress. This study’s molecular insights provide a foundation for further research on nanomaterial applications in plant virology and crop protection, emphasizing the promising role of CQDs in enhancing plant health and combating viral infections.Graphical

Induced Phytomanagement of Multi-Metal Polluted Soil with Conocarpus erectus Supported by Biochar, Lignin, and Citric Acid

Induced heavy metals (HMs) phytoextraction from heavily contaminated soils is challenging, as high HM bioavailability causes phytotoxicity and leaching. This study introduces a novel approach for HM immobilization with biochar (BC) and lignin (LN), and later their controlled mobilization with citric acid (CA) in soil. Conocarpus erectus was grown for 120 days in shooting-range soil (SS) polluted with Pb, Cr, Cd, Ni, and Cu. HM concentrations in parts of the plants, their percentage removal, and leaching from SS were measured. Moreover, plant biochemical parameters such as the contents of chlorophyll a (Chl-a), chlorophyll b (Chl-b), protein, ascorbic acid (AsA), amino acids, and total phenolics, along with biophysical parameters such as relative water content (RWC) and water uptake capacity (WUC), were also inspected. Adding BC, LN, and BC+LN to SS improved biomass, as well as the biophysical and biochemical parameters of plants, while efficiently reducing HM concentrations in plant parts, DTPA extract, and leachates compared to the control (CK). However, the greatest amplifications in plant height (82%), dry weight of root (RDW) (109%), and dry weight of shoot (SDW) (87%), plant health, and soil enzymes were noted with the BC+LN+CA treatment, compared with the CK. Moreover, this treatment resulted in Pb, Cr, Cd, Ni, and Cu removal by 68, 30, 69, 59, and 76% from the SS compared to the CK. Surprisingly, each HM concentration in the leachates with BC+LN+CA was below the critical limits for safer water reuse and agricultural purposes. Initial HM immobilization in HM-polluted soils, followed by their secured mobilization during enhanced phytoextraction, can enhance HM removal and reduce their leaching without compromising plant and soil health.

Exploring Plant-Bacterial Symbiosis for Eco-Friendly Agriculture and Enhanced Resilience.

This review explores the intricate relationship between plants and bacterial endophytes, revealing their multifaceted roles in promoting plant growth, resilience, and defense mechanisms. By selectively shaping their microbiome, plants harness diverse endophytic bacterial strains to enhance nutrient absorption, regulate hormones, mitigate damage, and contribute to overall plant health. The review underscores the potential of bacterial endophytes in self-sustaining agricultural systems, offering solutions to reduce reliance on fertilizers and pesticides. Additionally, the review highlights the importance of endophytes in enhancing plant tolerance to various environmental stresses, such as drought, salinity, extreme temperatures, and heavy metal toxicity. The review emphasizes the significance of understanding and harnessing the mutualistic relationship between plants and endophytes for maximizing agricultural yields and promoting sustainable farming practices.

Enzymatic Biosensors: Advanced Tools for Soil and Plant Health Monitoring

Soil health is the potential of the soil to support the productivity of organisms, preserve the environment, and improve the health of plants and animals. Healthy soil is vital for agricultural sustainability and environmental resilience. The presence of high concentrations of toxic chemicals (pollutants and contaminants) in the soil poses a significant risk to human health and the ecosystem. Plant health is influenced by various factors, including the surrounding environment. To minimize constraints such as low nutrient levels, ecosystem contamination/pollution, and pest and disease incidences in crops, and to maximize productivity and ensure agricultural sustainability, advanced detection and management strategies are urgently needed. Diagnosis, prediction, and monitoring are essential for managing agricultural practices to mitigate these harmful impacts. The development of improved biosensing devices has been driven by the demand for quick, accurate, sensitive, real-time, and fast instruments for screening and identifying contaminants. Specific enzymes are used as the biological sensing element in an enzyme-based biosensor, which is combined with a transducer to transform the signal from the enzymatic reaction into a quantifiable response proportionate to the analyte concentration. Enzymatic biosensors need to possess high specificity, selectivity, reproducibility, stability, a low limit of detection, a low limit of quantification, and a rapid response time. They have a diverse array of uses, such as soil quality monitoring, water monitoring, food quality monitoring, pathogen detection, drug discovery, disease identification, and environmental research.

Effects of cypermethrin on morphological, physiological and biochemical attributes of Cicer arietinum (Fabales: Fabaceae)

Cypermethrin, a synthetic pyrethroid, is a widely employed pesticide in large-scale commercial agriculture and domestic settings to control pests and boost crop yields. Despite its effectiveness in controlling pests, concerns persist about the potential ecological and human health impacts associated with its use. In the present study, the impact of cypermethrin on different parameters, including growth indices, pollen morphology and pollen fertility, chlorophyll and carotenoid content, hydrogen peroxide (H2O2) scavenging, lipid peroxidation (MDA concentration), superoxide dismutase (SOD), and catalase (CAT) activities, was investigated in Cicer arietinum L. The results showed that plants exhibited decreasing trends in plant height, number of branches, pods, and seeds per plant as cypermethrin concentrations increased. These changes resulted in significant reductions in the overall yield of the plants. The percentage of wrinkled pollen significantly increased with higher concentrations of cypermethrin and longer exposure durations. Exposure to cypermethrin showed significant variations in pollen fertility of C. arietinum at different concentrations and time intervals in comparison to control, which had a baseline pollen fertility of 79.12% ± 4.59. Chlorophyll and carotenoid content of C. arietinum were considerably affected by cypermethrin, indicative of potential disturbances in essential photosynthetic processes crucial for plant health. Further, with increasing concentrations of cypermethrin ranging from 100 mg/L to 500 mg/L, noticeable effects were observed on H2O2− scavenging, MDA concentration, SOD and CAT activities of C. arietinum in dose-dependent manner. Further, it was found that the duration of exposure and concentration of cypermethrin played a crucial role in exacerbating these detrimental effects. The findings of the present study raise concerns regarding the harmful effects of agricultural pesticides like cypermethrin and highlight the need for more research on the nutritional value of products derived from plants and seeds exposed to these agents.

Fatty Acid Composition, Oxidative Status, and Content of Biogenic Elements in Raw Oats Modified Through Agricultural Practices.

The chemical composition of raw oat grain is responsible for the high dietary value and health-promoting properties of oat products. This article presents the results of a study investigating the biofortification of grain in two oat genotypes-hulless and hulled-through agronomic treatments: chemical plant protection against weeds and fungi and mineral nitrogen fertilization. The applied agronomic treatments induced different changes in the fatty acid profiles, content of tocopherols, macronutrients, and micronutrients in the grain of hulled and hulless oats. Plant health contributed to higher concentrations of unsaturated fatty acids and potassium in oat grain. In turn, nitrogen fertilization decreased the content of unsaturated fatty acids, potassium, and copper and increased the content of saturated fatty acids, calcium, and manganese in oat grain. At the same time, agronomic treatments reduced the tocopherol content of the grain, which implies that the nutritional value of oats increases in the absence of chemical plant protection agents. The correlations between the content of desirable chemical compounds and agronomic treatments were stronger in hulless oat grain, which may suggest that the agronomic modification of oat-based foods is more effective in this genotype. The content of exogenous alpha-linoleic acid C18:3 n-3 and alpha-tocopherol was higher in grain harvested from the control treatment (without chemical plant protection), whereas grain harvested from fully protected treatments accumulated more essential gamma-linolenic acid C18:3 n-6. The content of gamma-tocopherol and copper in oat grain was higher in the absence of nitrogen fertilization.

Plant-Guided Microbiome Selection Produces Transient Effects on Insect Performance and Rhizosphere Community Assembly

Microbial communities are essential for plant health, but using these relationships to enhance growth and pest protection is challenging. Leveraging the natural mechanisms plants employ to manage relationships with microbes is one promising means to selectively engineer whole microbial communities with beneficial properties. This approach, known as host-guided selection, has been successful in some model species targeting performance traits (e.g., biomass). However, few studies use crop plants or focus on defensive traits (e.g., pest resistance). Our goal was to naturally engineer tomato root-associated microbiomes that increase resistance to insect pests. First, we used an iterative soil microbial inoculation process to engineer insect-suppressive rhizosphere soil microbiomes that reduce damage from aphid feeding ( Macrosiphum euphorbiae) or caterpillar defoliation ( Manduca sexta, Spodoptera exigua). We then characterized the bacterial and fungal microbial communities of soils associated with differences in insect performance using metabarcoding approaches. Overall, soil microbiome selection produced transient differences in aphid performance, but caterpillar growth was unaffected. In four of nine generations, the aphid population growth rate was significantly lower on plants with rhizospheres selected for “low” insect performance, where abundance was reduced by up to 20%. Correspondingly minor shifts in fungal and bacterial relative abundance occurred in insect-suppressive communities. However, network analysis indicated that aphid feeding disrupted rhizosphere microbiome assembly, resulting in lower community complexity and connectivity and fewer structurally important taxa compared with uninfested controls. Overall, our results highlight critical factors for successful engineering of beneficial microbiomes, particularly insect feeding guild and microbial community stability.