We previously reported disrupted placental structure, and vascular changes in placentas from fetuses with Congenital Heart Defects. Signaling between trophoblast and villous endothelium is proposed for proper placental development and function. We hypothesize that disruption of genes associated with CHD within the trophoblast impacts fetal endothelium and results in dysregulated placental vasculature in CHD fetuses. A model of human cytotrophoblast, BeWo choriocarcinoma cells and isolated human placental microvascular endothelial cells (HPMVEC) were treated for 48 hrs with HAND1 siRNA/lipofectamine. Additionally, control HPMVECs were exposed to conditioned BeWo media (+/- HAND1) for 48 hrs. Cells were harvested and total RNA isolated. RNA was sequenced on an Illumina NextSeq 550 platform (single end reads 85bp, read depth 25M). The Galaxy Bioinformatic Platform was used for quality control, alignment (Bowtie2) and generation of read counts (Feature Counts). Normalization and differential gene expression analyses were conducted using general linear modeling in edgeR package from Bioconductor. Significance was determined using a fold change cut off of >1.5 and raw p<0.05. Overrepresentation analysis was performed using Panther DB for Reactome pathways and GO terms Direct HAND1 knockdown in the BeWo choriocarcinoma cell line caused downregulation of 632 genes, and upregulation of 102 genes. Overrepresentation analysis identified disruption to pathways including cell differentiation, neurogenesis, localization, and cell projection organization. In contrast, direct HAND1 knockdown in HPMVECs resulted in minimal disruption to global gene expression with differential expression in just 18 genes. Indirect HAND1 disruption did not alter HPMVEC gene expression. Disruption to HAND1 expression significantly alters gene expression profile in trophoblast but not HPMVEC, either directly or indirectly. Disruption to the structure and vasculature of the placenta in cases of CHD is likely primarily due to abnormal trophoblast development.
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